Click here to switch to the map view.

The map label for this gene is 93005236

Identifier: 93005236

GI number: 93005236

Start: 493378

End: 493929

Strand: Reverse

Name: 93005236

Synonym: Pcryo_0406

Alternate gene names: NA

Gene position: 493929-493378 (Counterclockwise)

Preceding gene: 93005237

Following gene: 93005233

Centisome position: 16.14

GC content: 42.75

Gene sequence:

>552_bases
ATGACGACTGATATCGACAAGACGACTGAGAGATCTAAAAAGACACCCAAGCAAAAAGCACTGTCACTTATTAAAACTGT
GCTGCTCTACGGCTTGGTATTTGCCATTATTTATACTGCTGTTAACTGGTGGCGACAGCCGGTCATGCCAGCCGATCCAC
AGTTGCAATTGATGGATTATCAAGGGCATAGTATTGATTTGGCAGCAATGAGTGCGGATAAACCCACGCTGGTCTATTTT
TGGGGTACGTGGTGTCCGATATGTAGCGTGACCTCACCGAATATTAATGCGTTGGCTGCAGAAAATAACTATCCAGTCGT
TACTGTTGCTATCAAGTCCGGCTCTGACCAAGAGTTACACAGCTATCTTAAGCAAAACAACTATAGTTTTAATACTGTAA
ACGATAAAGAAGGCGCTATCTTTGATGATTGGCAAGGGCAAGTCACACCCTCTTATGTCATATTAAAAAATGGCGAGATG
AGCCAAGGGCTTACAGGCATTCAACCATTATGGTCATTAAAACTAAGACTGTGGCTGTCGTCAGTTTTTTAG

Upstream 100 bases:

>100_bases
GCCGACAGAGGCTGCGTAAAATTCATCCCAGTCCTACTGTATCGCTTTAATACTGAATTCACTGTACTTATAAAAGCCAC
CGAGCAAAAAAGCAGCCACT

Downstream 100 bases:

>100_bases
GGCTGAAATTAAATAGTCTTAGTCTAGCACCTCACGCAAAAACCCTATAGCAGAGCTCACTGCTATAGGGTTTTTGTCTA
AACATTTGAAAAAATTATGA

Product: putative thioredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTTDIDKTTERSKKTPKQKALSLIKTVLLYGLVFAIIYTAVNWWRQPVMPADPQLQLMDYQGHSIDLAAMSADKPTLVYF
WGTWCPICSVTSPNINALAAENNYPVVTVAIKSGSDQELHSYLKQNNYSFNTVNDKEGAIFDDWQGQVTPSYVILKNGEM
SQGLTGIQPLWSLKLRLWLSSVF

Sequences:

>Translated_183_residues
MTTDIDKTTERSKKTPKQKALSLIKTVLLYGLVFAIIYTAVNWWRQPVMPADPQLQLMDYQGHSIDLAAMSADKPTLVYF
WGTWCPICSVTSPNINALAAENNYPVVTVAIKSGSDQELHSYLKQNNYSFNTVNDKEGAIFDDWQGQVTPSYVILKNGEM
SQGLTGIQPLWSLKLRLWLSSVF
>Mature_182_residues
TTDIDKTTERSKKTPKQKALSLIKTVLLYGLVFAIIYTAVNWWRQPVMPADPQLQLMDYQGHSIDLAAMSADKPTLVYFW
GTWCPICSVTSPNINALAAENNYPVVTVAIKSGSDQELHSYLKQNNYSFNTVNDKEGAIFDDWQGQVTPSYVILKNGEMS
QGLTGIQPLWSLKLRLWLSSVF

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 20596; Mature: 20465

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDIDKTTERSKKTPKQKALSLIKTVLLYGLVFAIIYTAVNWWRQPVMPADPQLQLMDY
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
QGHSIDLAAMSADKPTLVYFWGTWCPICSVTSPNINALAAENNYPVVTVAIKSGSDQELH
CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHH
SYLKQNNYSFNTVNDKEGAIFDDWQGQVTPSYVILKNGEMSQGLTGIQPLWSLKLRLWLS
HHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
SVF
HCC
>Mature Secondary Structure 
TTDIDKTTERSKKTPKQKALSLIKTVLLYGLVFAIIYTAVNWWRQPVMPADPQLQLMDY
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
QGHSIDLAAMSADKPTLVYFWGTWCPICSVTSPNINALAAENNYPVVTVAIKSGSDQELH
CCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHH
SYLKQNNYSFNTVNDKEGAIFDDWQGQVTPSYVILKNGEMSQGLTGIQPLWSLKLRLWLS
HHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
SVF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]