Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is cheY [H]
Identifier: 93005216
GI number: 93005216
Start: 472744
End: 473106
Strand: Direct
Name: cheY [H]
Synonym: Pcryo_0386
Alternate gene names: 93005216
Gene position: 472744-473106 (Clockwise)
Preceding gene: 93005215
Following gene: 93005217
Centisome position: 15.45
GC content: 43.25
Gene sequence:
>363_bases ATGTATAAATTAATGATCGTCGATGATTCAAATATCATTCGAAACCGTATTCAGCGCGCTTATGACTCGGGTCAATTCAT GTTGGTTGCTACAGCAACCAGTGGGGTTCAAGCGCTTGAAAAGTTCAATATTCATCGTCCAGATGTGGTGACCATGGATT TGACCATGCCGCAAATGGACGGTCTTGAGTGTATTGAAAAAATCATTGCTATCGACCCTGACGTTCGTATCTTGGTTGTC TCAGCCTTGTCTGACAAATCTACTGGCATTGAAGCGTTATCATTGGGCGCGAGTGGGTTCTTGTGCAAGCCTTTTTCAGA AGAAGAGCTGGTAGAGTCTTTGTATGAGTTGGTACAAGACTAA
Upstream 100 bases:
>100_bases AAGAGCACAACGGTAAGCTGAATGTAAATACTGAGCTTGGAAAAATGACCCGTTTTGTCATCACCTTGCCTGCTGCGTAA TTAAGGACAATAAAAAATCT
Downstream 100 bases:
>100_bases TATTGTCCAATAATTTTAATAAATACCTTATTAAAGAACACACATTATGAAAGAGCAAAATTTACAAATTTTTGTGAGTA TTATTACCAACTATTTTACT
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MYKLMIVDDSNIIRNRIQRAYDSGQFMLVATATSGVQALEKFNIHRPDVVTMDLTMPQMDGLECIEKIIAIDPDVRILVV SALSDKSTGIEALSLGASGFLCKPFSEEELVESLYELVQD
Sequences:
>Translated_120_residues MYKLMIVDDSNIIRNRIQRAYDSGQFMLVATATSGVQALEKFNIHRPDVVTMDLTMPQMDGLECIEKIIAIDPDVRILVV SALSDKSTGIEALSLGASGFLCKPFSEEELVESLYELVQD >Mature_120_residues MYKLMIVDDSNIIRNRIQRAYDSGQFMLVATATSGVQALEKFNIHRPDVVTMDLTMPQMDGLECIEKIIAIDPDVRILVV SALSDKSTGIEALSLGASGFLCKPFSEEELVESLYELVQD
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=32.4074074074074, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1790437, Length=111, Percent_Identity=36.036036036036, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1790299, Length=106, Percent_Identity=33.9622641509434, Blast_Score=63, Evalue=7e-12, Organism=Escherichia coli, GI1788191, Length=119, Percent_Identity=33.6134453781513, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1788192, Length=108, Percent_Identity=37.962962962963, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1788222, Length=115, Percent_Identity=29.5652173913043, Blast_Score=59, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13328; Mature: 13328
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLMIVDDSNIIRNRIQRAYDSGQFMLVATATSGVQALEKFNIHRPDVVTMDLTMPQMD CEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCC GLECIEKIIAIDPDVRILVVSALSDKSTGIEALSLGASGFLCKPFSEEELVESLYELVQD CHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYKLMIVDDSNIIRNRIQRAYDSGQFMLVATATSGVQALEKFNIHRPDVVTMDLTMPQMD CEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCC GLECIEKIIAIDPDVRILVVSALSDKSTGIEALSLGASGFLCKPFSEEELVESLYELVQD CHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]