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The map label for this gene is cc4 [H]

Identifier: 93005118

GI number: 93005118

Start: 346191

End: 346859

Strand: Direct

Name: cc4 [H]

Synonym: Pcryo_0287

Alternate gene names: 93005118

Gene position: 346191-346859 (Clockwise)

Preceding gene: 93005117

Following gene: 93005119

Centisome position: 11.31

GC content: 46.79

Gene sequence:

>669_bases
ATGAAAAAGTTAATCGCTGCCGCCAGCTTATGTGTTGCAAGTTTCAGCGTACAAGCTGCTATCACTGTTCCTGAATATGA
TCTTAATGCCGGCAAACAAATTGCAGAAACTGTCTGTGCTGCTTGTCATGGTGTTGATGGTGTGAGCCCTGTGCCTGCCC
AGCCAAATCTTGGTGGTCAAAACGTTAAGTATTTATATAAGCAATTGGTCAATTTTAAAGCAGGCTACCGCAAAAACGGT
ATCATGCAGTCGCAAGTGGCCAATTTGTCGCAGCAAGATTTAGCCAACGTTGCAGGTTATTACTCAAGCCAGAAACCTTG
GGGTGTGGCGTTCGGTAATCCTGCAACTACGCAAGAAGCCAGCAAGTTGTTTTTAGGTGGTGATAAGTCACGCGGTGTCA
TCGGTTGTGCGGGCTGTCATGGTCCAGACGCAGCGGGTAACGTATGGGCAGCATTTCCACGTTTAGGTGGACAGCATGCT
GAATATATTGCCACCCAGTTAAAGCTTTTCCGTGCCGCTGGTCGTGTAGATGATATCGATAGCGACGAGCAAAAGCGTGT
CAATGATGCTGCAAAAGAAGGCGAGATGGGCATGATGCAGACCGTTGCTTCTAAACTGTCAGATCGTGATATCCGTATCT
TGTCAGATTATGTGAGTGCTATTCACTAA

Upstream 100 bases:

>100_bases
TACGGCTTAGCGACTAAATAATGGCTTTGTGAATATAATACGTCTACATAATGCAATCACTCTAAACAATGCTTACATCG
AGTTAGTAGGATTTGTATCA

Downstream 100 bases:

>100_bases
TATCAGATAAAGTCGGTGTTCTTCATTGCTATTCTTAAGAAAAGTGCCTTCTACATTGGTTTTAACTGAGTTATTAAACC
CCGATTTCGGGGTTTTTTTA

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKLIAAASLCVASFSVQAAITVPEYDLNAGKQIAETVCAACHGVDGVSPVPAQPNLGGQNVKYLYKQLVNFKAGYRKNG
IMQSQVANLSQQDLANVAGYYSSQKPWGVAFGNPATTQEASKLFLGGDKSRGVIGCAGCHGPDAAGNVWAAFPRLGGQHA
EYIATQLKLFRAAGRVDDIDSDEQKRVNDAAKEGEMGMMQTVASKLSDRDIRILSDYVSAIH

Sequences:

>Translated_222_residues
MKKLIAAASLCVASFSVQAAITVPEYDLNAGKQIAETVCAACHGVDGVSPVPAQPNLGGQNVKYLYKQLVNFKAGYRKNG
IMQSQVANLSQQDLANVAGYYSSQKPWGVAFGNPATTQEASKLFLGGDKSRGVIGCAGCHGPDAAGNVWAAFPRLGGQHA
EYIATQLKLFRAAGRVDDIDSDEQKRVNDAAKEGEMGMMQTVASKLSDRDIRILSDYVSAIH
>Mature_222_residues
MKKLIAAASLCVASFSVQAAITVPEYDLNAGKQIAETVCAACHGVDGVSPVPAQPNLGGQNVKYLYKQLVNFKAGYRKNG
IMQSQVANLSQQDLANVAGYYSSQKPWGVAFGNPATTQEASKLFLGGDKSRGVIGCAGCHGPDAAGNVWAAFPRLGGQHA
EYIATQLKLFRAAGRVDDIDSDEQKRVNDAAKEGEMGMMQTVASKLSDRDIRILSDYVSAIH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23568; Mature: 23568

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIAAASLCVASFSVQAAITVPEYDLNAGKQIAETVCAACHGVDGVSPVPAQPNLGGQ
CCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NVKYLYKQLVNFKAGYRKNGIMQSQVANLSQQDLANVAGYYSSQKPWGVAFGNPATTQEA
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHH
SKLFLGGDKSRGVIGCAGCHGPDAAGNVWAAFPRLGGQHAEYIATQLKLFRAAGRVDDID
HHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
SDEQKRVNDAAKEGEMGMMQTVASKLSDRDIRILSDYVSAIH
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLIAAASLCVASFSVQAAITVPEYDLNAGKQIAETVCAACHGVDGVSPVPAQPNLGGQ
CCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NVKYLYKQLVNFKAGYRKNGIMQSQVANLSQQDLANVAGYYSSQKPWGVAFGNPATTQEA
HHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHH
SKLFLGGDKSRGVIGCAGCHGPDAAGNVWAAFPRLGGQHAEYIATQLKLFRAAGRVDDID
HHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
SDEQKRVNDAAKEGEMGMMQTVASKLSDRDIRILSDYVSAIH
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]