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The map label for this gene is 93005117

Identifier: 93005117

GI number: 93005117

Start: 345521

End: 345856

Strand: Direct

Name: 93005117

Synonym: Pcryo_0286

Alternate gene names: NA

Gene position: 345521-345856 (Clockwise)

Preceding gene: 93005115

Following gene: 93005118

Centisome position: 11.29

GC content: 44.94

Gene sequence:

>336_bases
ATGTTATCGATGACCATGATTTTTGCCAAAGGCAATCGCTTTTTAGCCAGCAGTGTTAGCGCGCTTATCATTAGTGCAGC
TATGATAACTGGTGCAGGGGCGGCTAGTACTGCAACGACTTATAATGAGTCCTGCGCTGCGTGCCACGACAGCGGTGCCT
TGAATGCGATTAAAAAAGGCGATAGTGCCAAGTGGCAGCAGCTAATAAAACAAAAAGGCATGCCTGCACTTATTAGTTCG
GTCAAAAATGGTATGATTCAGATGCCAGCTGGTGGGTTGTGCGAAGATTGTAGCAATGATGACTATCGTAAGCTGATTGA
GTATATGAGCAAATAA

Upstream 100 bases:

>100_bases
ATATTGTTACAATCTCTAGCAGAATAGGTTTATTCACAGATGTTAAGGCACAGAAGCAATGAAGCAAACGTCTGGACGGA
TGAGCCAATGGAGGTGTCTT

Downstream 100 bases:

>100_bases
ATATCTATTAAATCATTATTAGCTATTTGCTAAGAGATATAAATAAGGCGCAAGGGTCTAGAACCTTTTGCGCTTTTTGC
TCTTTATAAACCAAAGATTG

Product: putative cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C Subfamily Protein; Cytochrome C; Soluble Cytochrome CA; Class I Cytochrome C; Cytochrome; Cytochrome C-Type Protein

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLSMTMIFAKGNRFLASSVSALIISAAMITGAGAASTATTYNESCAACHDSGALNAIKKGDSAKWQQLIKQKGMPALISS
VKNGMIQMPAGGLCEDCSNDDYRKLIEYMSK

Sequences:

>Translated_111_residues
MLSMTMIFAKGNRFLASSVSALIISAAMITGAGAASTATTYNESCAACHDSGALNAIKKGDSAKWQQLIKQKGMPALISS
VKNGMIQMPAGGLCEDCSNDDYRKLIEYMSK
>Mature_111_residues
MLSMTMIFAKGNRFLASSVSALIISAAMITGAGAASTATTYNESCAACHDSGALNAIKKGDSAKWQQLIKQKGMPALISS
VKNGMIQMPAGGLCEDCSNDDYRKLIEYMSK

Specific function: Unknown

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11704; Mature: 11704

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMTMIFAKGNRFLASSVSALIISAAMITGAGAASTATTYNESCAACHDSGALNAIKKG
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHCC
DSAKWQQLIKQKGMPALISSVKNGMIQMPAGGLCEDCSNDDYRKLIEYMSK
CCHHHHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLSMTMIFAKGNRFLASSVSALIISAAMITGAGAASTATTYNESCAACHDSGALNAIKKG
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHCC
DSAKWQQLIKQKGMPALISSVKNGMIQMPAGGLCEDCSNDDYRKLIEYMSK
CCHHHHHHHHHCCCHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA