Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005096
Identifier: 93005096
GI number: 93005096
Start: 313555
End: 314367
Strand: Direct
Name: 93005096
Synonym: Pcryo_0265
Alternate gene names: NA
Gene position: 313555-314367 (Clockwise)
Preceding gene: 93005095
Following gene: 93005097
Centisome position: 10.25
GC content: 39.85
Gene sequence:
>813_bases ATGGGTTTGGCATACGGGAGAGCGGAGCAAGGAGCAACGCTAATAGTGGTGTTATTGTTTTTAGTGCTGATTATGTTGGC AGGGGCTATTGCAGTTAGACAAAGTACGACAGATCTTAAAATTGCGACAAGTGATCAGATCAATACAGTATTACTGCAAT CAGCAGATAGTGCTAATCAAAAAATAGAGACCATGGTAAATGGGAGCCCAACATCTAATGGATACCAAGATGTAACAAGT GCGACAGGGGCACTCGGTCATTTTTTATTATTTGAAGATAATAAAGCTAATGAATTTATTTATTGTTTTAATCCACGTAC CCAGAGATATTTAACCAATAGTGCAACAGTCAGGGTGCCTGCTGGTGGGTATGTAGATGGTATTAATAACGGTGTCTGTA ATTATGCAAATGCTGCTGATTACACTAGTGCTAGGCAGGCAGTTATGACACAGGTGAGTATTGCGATTACTCCTCCTAGT GCAAATATAGAAGCGTTTGAACATGTTGTCATTGGTAAAGAAGTTGAAGACAGAACAAGCAAAAAGTTTAAATTTGATAT TCGACCAACATCTTCATTGCCCGCTTATAATGAGCCCAAATTAGGGACTGAAAAGTGCTTCGAGCAGACCAGTATTCCTA ACAATGTAGCAACTGGCAAAAAATCATTAGATGAGTGCCTATTAGCGGCTAGCACACCGAGCAAAATGCTGTATGAGCAA GCAGATGTTGAAAACGTTTCTTCTTCTACCAAATGTTATCCCTTTGGTAAAGGAACACTAAATTCCAAGTGTGTACTTTC AACAGCGCCCTAG
Upstream 100 bases:
>100_bases CGTGTAGTCAATATAAATACCAGCCTATAACCTATTGGTAAGGAGACTAAAAGTGATTCACTATCGTGACTTATCAAGTT CGACACAAAAACATATCAAT
Downstream 100 bases:
>100_bases TCTGCTTACTCATTGCACTGAAACAATATAAGGATAGATGTCATGAAGCGATTTGACAACATACCGACAATAAATAACAT GATTGCAGTACCACTAAAGT
Product: putative pilus assembly protein PilX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MGLAYGRAEQGATLIVVLLFLVLIMLAGAIAVRQSTTDLKIATSDQINTVLLQSADSANQKIETMVNGSPTSNGYQDVTS ATGALGHFLLFEDNKANEFIYCFNPRTQRYLTNSATVRVPAGGYVDGINNGVCNYANAADYTSARQAVMTQVSIAITPPS ANIEAFEHVVIGKEVEDRTSKKFKFDIRPTSSLPAYNEPKLGTEKCFEQTSIPNNVATGKKSLDECLLAASTPSKMLYEQ ADVENVSSSTKCYPFGKGTLNSKCVLSTAP
Sequences:
>Translated_270_residues MGLAYGRAEQGATLIVVLLFLVLIMLAGAIAVRQSTTDLKIATSDQINTVLLQSADSANQKIETMVNGSPTSNGYQDVTS ATGALGHFLLFEDNKANEFIYCFNPRTQRYLTNSATVRVPAGGYVDGINNGVCNYANAADYTSARQAVMTQVSIAITPPS ANIEAFEHVVIGKEVEDRTSKKFKFDIRPTSSLPAYNEPKLGTEKCFEQTSIPNNVATGKKSLDECLLAASTPSKMLYEQ ADVENVSSSTKCYPFGKGTLNSKCVLSTAP >Mature_269_residues GLAYGRAEQGATLIVVLLFLVLIMLAGAIAVRQSTTDLKIATSDQINTVLLQSADSANQKIETMVNGSPTSNGYQDVTSA TGALGHFLLFEDNKANEFIYCFNPRTQRYLTNSATVRVPAGGYVDGINNGVCNYANAADYTSARQAVMTQVSIAITPPSA NIEAFEHVVIGKEVEDRTSKKFKFDIRPTSSLPAYNEPKLGTEKCFEQTSIPNNVATGKKSLDECLLAASTPSKMLYEQA DVENVSSSTKCYPFGKGTLNSKCVLSTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28991; Mature: 28860
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAYGRAEQGATLIVVLLFLVLIMLAGAIAVRQSTTDLKIATSDQINTVLLQSADSANQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEEECCCCCCH KIETMVNGSPTSNGYQDVTSATGALGHFLLFEDNKANEFIYCFNPRTQRYLTNSATVRVP HHHHEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCEEECCCCEEEEC AGGYVDGINNGVCNYANAADYTSARQAVMTQVSIAITPPSANIEAFEHVVIGKEVEDRTS CCCEECCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCHHHHHHEEECCCHHCCCC KKFKFDIRPTSSLPAYNEPKLGTEKCFEQTSIPNNVATGKKSLDECLLAASTPSKMLYEQ CEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCCHHHHHHH ADVENVSSSTKCYPFGKGTLNSKCVLSTAP HCHHHCCCCCCEEECCCCCCCCEEEEECCC >Mature Secondary Structure GLAYGRAEQGATLIVVLLFLVLIMLAGAIAVRQSTTDLKIATSDQINTVLLQSADSANQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEEECCCCCCH KIETMVNGSPTSNGYQDVTSATGALGHFLLFEDNKANEFIYCFNPRTQRYLTNSATVRVP HHHHEECCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCEEECCCCEEEEC AGGYVDGINNGVCNYANAADYTSARQAVMTQVSIAITPPSANIEAFEHVVIGKEVEDRTS CCCEECCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCHHHHHHEEECCCHHCCCC KKFKFDIRPTSSLPAYNEPKLGTEKCFEQTSIPNNVATGKKSLDECLLAASTPSKMLYEQ CEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCCHHHHHHH ADVENVSSSTKCYPFGKGTLNSKCVLSTAP HCHHHCCCCCCEEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA