Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 93005061
GI number: 93005061
Start: 274524
End: 274973
Strand: Reverse
Name: yqeY [H]
Synonym: Pcryo_0230
Alternate gene names: 93005061
Gene position: 274973-274524 (Counterclockwise)
Preceding gene: 93005062
Following gene: 93005059
Centisome position: 8.99
GC content: 43.56
Gene sequence:
>450_bases ATGAGCCAAATTAAACAGACGCTAACTGACACCATCAAAGTCTCTATGAAAGCACGTGAGATTGAACGGGTCAAAGTACT GCGTAACGTACAAGCGGTTATCAAACAAATTGAGATCGACCGTCGAATCGAGCTTGATGATGCCGAAGTTTTGGAGATAT TACAAAAACAGCTCAAACAGCGCCATGAGTCATTGACTATTTTTACCGAAAACGGTCGTGATGACTTGGCAACCAAAGAG CAGTTTGAGATTGATATTATCAATGAATATATGCCAAAACAGATGGATGATGCGGAGATTACTGCCTTGGTAAACGCAGA AATCGCCGAGCAAGGCGCAACGTCAATGCGTGATATGGGTAGCGTGATGGGTATATTAAAAACGAAAACTGCGGGTCGTG CTGACCCTGCCTTAATCTCAAAGCTGGTCAAAGACGCGCTACAAGGTTAA
Upstream 100 bases:
>100_bases ATTACTATCATTGGTTCTAACACTTTCTATTATAAAGCTTGTTCTGATTAGTAGACTTTTTACACAAACTTTTTACCTAT AATCATAAGGAATAACAACA
Downstream 100 bases:
>100_bases TCGCTACAGCATATTGATAAAATCAACGCTTTTTCTATATAGCGCTTTATAGCAGTTAATTATCAGAGAACCGCCTAAGG CTTAAAGTCTTTGGCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSQIKQTLTDTIKVSMKAREIERVKVLRNVQAVIKQIEIDRRIELDDAEVLEILQKQLKQRHESLTIFTENGRDDLATKE QFEIDIINEYMPKQMDDAEITALVNAEIAEQGATSMRDMGSVMGILKTKTAGRADPALISKLVKDALQG
Sequences:
>Translated_149_residues MSQIKQTLTDTIKVSMKAREIERVKVLRNVQAVIKQIEIDRRIELDDAEVLEILQKQLKQRHESLTIFTENGRDDLATKE QFEIDIINEYMPKQMDDAEITALVNAEIAEQGATSMRDMGSVMGILKTKTAGRADPALISKLVKDALQG >Mature_148_residues SQIKQTLTDTIKVSMKAREIERVKVLRNVQAVIKQIEIDRRIELDDAEVLEILQKQLKQRHESLTIFTENGRDDLATKEQ FEIDIINEYMPKQMDDAEITALVNAEIAEQGATSMRDMGSVMGILKTKTAGRADPALISKLVKDALQG
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16826; Mature: 16695
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIKQTLTDTIKVSMKAREIERVKVLRNVQAVIKQIEIDRRIELDDAEVLEILQKQLKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RHESLTIFTENGRDDLATKEQFEIDIINEYMPKQMDDAEITALVNAEIAEQGATSMRDMG HHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SVMGILKTKTAGRADPALISKLVKDALQG HHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SQIKQTLTDTIKVSMKAREIERVKVLRNVQAVIKQIEIDRRIELDDAEVLEILQKQLKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RHESLTIFTENGRDDLATKEQFEIDIINEYMPKQMDDAEITALVNAEIAEQGATSMRDMG HHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SVMGILKTKTAGRADPALISKLVKDALQG HHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]