Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005038
Identifier: 93005038
GI number: 93005038
Start: 244940
End: 245434
Strand: Reverse
Name: 93005038
Synonym: Pcryo_0207
Alternate gene names: NA
Gene position: 245434-244940 (Counterclockwise)
Preceding gene: 93005040
Following gene: 93005033
Centisome position: 8.02
GC content: 41.21
Gene sequence:
>495_bases ATGAGTAACCAAGAGCATCTCGATAAAATCCAAGCCGTCATCAAAGACGTGAAATTTGCCATGATGAGTACCAGCAATAA AAAAGGCGATATTCATGCGTGGCCAATGACCACAAGTGAAGTCAACCTTGATAATAAAGAGATCTGGTTTATCGGCGATA AAAAATCAGATGTCGTCAAAGATATTCAGGATGATGCAAGAATCGGGCTGACTTATGCCACTCAAGATGAAAAGAATTTT GTTTCTATCAGTGCTAACGCTGAATTACCGACAGACAAAGCCAAATTGGACGAGCTTTGGTCGCCAGTTTACAATGCCTT TTTTGAGCATGGTAAAGAAGATGAAAACGTACAATTGATTAAAGTAGTTCCTCATGGTGCAGAATGCTGGCTTAGCGGTA GTACAGTGGTGAATATGTTTAAGATGGCAGCGGCAGCCGTACAAGACGGCAAAACTGCTGAAGATATGGGCGAGACCTTT TCCGTTTCTTTATAA
Upstream 100 bases:
>100_bases TATGAAATAAACGGTTTGTCTACACTAACCTGTTAATAATTATTTCCCTAACAACTATAAATTCATAATTTATTTACAAT AATGAAAAAGGATATCCACC
Downstream 100 bases:
>100_bases TTTATTATTAAACTATCAAGTAGATAAAAACAAAATTTTTATCATAAAAAACGCCAGTGGCTGATGCGACTGGCGTTTTT TGTTGACTGGGCTTTATAGT
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSNQEHLDKIQAVIKDVKFAMMSTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKKSDVVKDIQDDARIGLTYATQDEKNF VSISANAELPTDKAKLDELWSPVYNAFFEHGKEDENVQLIKVVPHGAECWLSGSTVVNMFKMAAAAVQDGKTAEDMGETF SVSL
Sequences:
>Translated_164_residues MSNQEHLDKIQAVIKDVKFAMMSTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKKSDVVKDIQDDARIGLTYATQDEKNF VSISANAELPTDKAKLDELWSPVYNAFFEHGKEDENVQLIKVVPHGAECWLSGSTVVNMFKMAAAAVQDGKTAEDMGETF SVSL >Mature_163_residues SNQEHLDKIQAVIKDVKFAMMSTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKKSDVVKDIQDDARIGLTYATQDEKNFV SISANAELPTDKAKLDELWSPVYNAFFEHGKEDENVQLIKVVPHGAECWLSGSTVVNMFKMAAAAVQDGKTAEDMGETFS VSL
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18259; Mature: 18127
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQEHLDKIQAVIKDVKFAMMSTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKKSDVVK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCCCEEEEEECCHHHHHH DIQDDARIGLTYATQDEKNFVSISANAELPTDKAKLDELWSPVYNAFFEHGKEDENVQLI HHHCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE KVVPHGAECWLSGSTVVNMFKMAAAAVQDGKTAEDMGETFSVSL EEECCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHCCCEEEECC >Mature Secondary Structure SNQEHLDKIQAVIKDVKFAMMSTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKKSDVVK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCCCEEEEEECCHHHHHH DIQDDARIGLTYATQDEKNFVSISANAELPTDKAKLDELWSPVYNAFFEHGKEDENVQLI HHHCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE KVVPHGAECWLSGSTVVNMFKMAAAAVQDGKTAEDMGETFSVSL EEECCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA