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The map label for this gene is ybhP [H]

Identifier: 93004917

GI number: 93004917

Start: 99407

End: 100180

Strand: Direct

Name: ybhP [H]

Synonym: Pcryo_0086

Alternate gene names: 93004917

Gene position: 99407-100180 (Clockwise)

Preceding gene: 93004916

Following gene: 93004918

Centisome position: 3.25

GC content: 44.32

Gene sequence:

>774_bases
ATGACTACTACCATTATGACTAATACCACCTCTTTTGTACTCACAAGTTATAACATTCATAAAGGCATGTCGCCTATGAA
TCGCCAGGTCAAAGTTCAGGGTATCGCCCAAGCACTTGATATTATAGGTTCCGACATACTCTGCCTACAAGAAGTACAGG
GGCAAAACCTTAAGCGCAATATTCAATATAACGAGTACCCTGACCAGTCTCAGCACGAATGGTTTGGTGAATATCTGCAA
CTAGAAAACAGTTATGGCAAAAATTCAGAGTACGATAACGGCCATCATGGCAATGCTGTATTGAGCCGATTTCCACTTGA
TCCCAAGCACAACGTCAATATTACGGTCAATAAGCTTGAGCAGCGCGGGGTTTTGCATTGTGAAGTGCAGCCGGTAGGTT
GGGAGGTGCCAGTGGTGGTTTTATGCGCCCATTTAAACCTATTTGAGCGCGATCGTATCAAGCAATATGAAGCGATTTCT
AACTATGTCAGAGATGAGATTGCCCCTGACCAGCCACTGATTTTGGCCGGCGATTTTAATGACTGGAAAAAAATGTCTTG
TGATAGATTGGCATCAAGCTTGGGTATGACGGAAGCTTTTAAACATTGTCACGGCAAGCTGCTGCCTACCTTTCCAGCAA
AGCTACCTGTATTGAGCTTAGACCGTATCTATGTCCGTAATCTCAGAATAAAAGATGCTTGGGTACATACGGGTAAACCG
TGGTCAACCCTGTCTGATCATCTGCCTTTGAGTGCAGAACTGGCGTTGCTATAG

Upstream 100 bases:

>100_bases
GTATGGTTTTCTAGTGCCTCGATTCTATTTCAAACGATTATTTTTTATTTTAAGCTGACCATATTCAATACCCAATATCT
ACTCTATAAATACTGAGTTT

Downstream 100 bases:

>100_bases
AGTAAAAATTATTAATGGAATAAAGAACGCTAAACTAAAATAAACAAGGATGATAAATAATGTCTGATAAAAGCATGCCA
ATGACTCAAAATGCCGTACT

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTTTIMTNTTSFVLTSYNIHKGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQNLKRNIQYNEYPDQSQHEWFGEYLQ
LENSYGKNSEYDNGHHGNAVLSRFPLDPKHNVNITVNKLEQRGVLHCEVQPVGWEVPVVVLCAHLNLFERDRIKQYEAIS
NYVRDEIAPDQPLILAGDFNDWKKMSCDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLDRIYVRNLRIKDAWVHTGKP
WSTLSDHLPLSAELALL

Sequences:

>Translated_257_residues
MTTTIMTNTTSFVLTSYNIHKGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQNLKRNIQYNEYPDQSQHEWFGEYLQ
LENSYGKNSEYDNGHHGNAVLSRFPLDPKHNVNITVNKLEQRGVLHCEVQPVGWEVPVVVLCAHLNLFERDRIKQYEAIS
NYVRDEIAPDQPLILAGDFNDWKKMSCDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLDRIYVRNLRIKDAWVHTGKP
WSTLSDHLPLSAELALL
>Mature_256_residues
TTTIMTNTTSFVLTSYNIHKGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQNLKRNIQYNEYPDQSQHEWFGEYLQL
ENSYGKNSEYDNGHHGNAVLSRFPLDPKHNVNITVNKLEQRGVLHCEVQPVGWEVPVVVLCAHLNLFERDRIKQYEAISN
YVRDEIAPDQPLILAGDFNDWKKMSCDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLDRIYVRNLRIKDAWVHTGKPW
STLSDHLPLSAELALL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=250, Percent_Identity=37.6, Blast_Score=189, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 29280; Mature: 29149

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTIMTNTTSFVLTSYNIHKGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQNLKRN
CCEEEEECCCEEEEEEEHHHCCCCCCCCEEHHHHHHHHHHHHCCCCEEHHHHCCCCCEEC
IQYNEYPDQSQHEWFGEYLQLENSYGKNSEYDNGHHGNAVLSRFPLDPKHNVNITVNKLE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEHH
QRGVLHCEVQPVGWEVPVVVLCAHLNLFERDRIKQYEAISNYVRDEIAPDQPLILAGDFN
HCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
DWKKMSCDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLDRIYVRNLRIKDAWVHTGKP
HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHEEEEEHEEEECCCC
WSTLSDHLPLSAELALL
HHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
TTTIMTNTTSFVLTSYNIHKGMSPMNRQVKVQGIAQALDIIGSDILCLQEVQGQNLKRN
CEEEEECCCEEEEEEEHHHCCCCCCCCEEHHHHHHHHHHHHCCCCEEHHHHCCCCCEEC
IQYNEYPDQSQHEWFGEYLQLENSYGKNSEYDNGHHGNAVLSRFPLDPKHNVNITVNKLE
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEHH
QRGVLHCEVQPVGWEVPVVVLCAHLNLFERDRIKQYEAISNYVRDEIAPDQPLILAGDFN
HCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
DWKKMSCDRLASSLGMTEAFKHCHGKLLPTFPAKLPVLSLDRIYVRNLRIKDAWVHTGKP
HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHEEEEEHEEEECCCC
WSTLSDHLPLSAELALL
HHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]