Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92114022
Identifier: 92114022
GI number: 92114022
Start: 2156980
End: 2158248
Strand: Direct
Name: 92114022
Synonym: Csal_1899
Alternate gene names: NA
Gene position: 2156980-2158248 (Clockwise)
Preceding gene: 92114021
Following gene: 92114023
Centisome position: 58.35
GC content: 64.93
Gene sequence:
>1269_bases ATGGCGATACGTCCCTCGAGTCTGCTCATCATCGCGATGCTGGCTCTCAGCATCGCCTGCTCGTTGCTGCACCTGCCGCT TTGGCCGGCCGCTGTCCTCGGCTGGCTGGCCACGCTGCGACTGGGGTTGACGCTACCGCGCGCTTCGCGACGACAGACGC TATGGCTGGGCCTGGCCGGCGTCTCGATCTGGCTGGTGGCGCTGTGGCGAGATACGCCAACATCCCTGGCCACGGCCGTG AGCATCAACCAGCCGCTGCTGATGATGTTCGCCGGCGTCAGCTTTCTCTCCATGGCGCGTCCCGCTGCCGACGACGCCTC GGGAGGCGAGCGTCACGGCAGTTTCTGGGGCACGCTGGCCGGCGTGCATCTCTTCGGTGCCGTCATCAATCTCTCGGTAC TGTTCCTGTTCGGCGATCGCATGCAACGCGAGGGACGTCTGACACGCAAGCAGGTCAGCGTGCTGGGGCGCGCCTTTCCG GCAGCTGCCGCCTGGTCGCCGTTCTTCGTCGCCATGGGCGTTGCCCTGACCTACTCGCCAGGCCTCGACTTTCTCGCGCT TTTGCCCTGGGGCGGTTTGGCGGCGATGCTTCTGCTCGGACTCATCGCGCTCGATGCACACCGATTGCCGGGCACGTTCA TCGGTTATCCGCTCGAAAAAGGCAGCTTGCTGTTGCCGGGTGCGCTGGCCTCGAGCGTGGTCGTGACCCACTTCATCTGG CCGTCGCTGTCCATCCCCTTGATCATCGCCATCGCGTCGCCCTTCTTCGCGATCCTGCTGGTACCGTCCGCATCCCGACG CCAGCGCTTGCATCAGCAGCTCAACGAGGGGCTACCGCGGCTGGGTCCTCAGTTCGCGTTGTTTCTGGTCGCCGGGGTCA TTTCGAGTGGCCTGGCGGCCCTGATCGCCAGCGCCCCCGATCGGCAACTCATTCCCCTCGACCATTTTGGGAGTTTTGCC GCCTGGGTGACGCAAGGTATTCTCGTGGTATTGGCCTTCGTCGGCATTCATCCGCTCGTGGGCATCGCCACGCTGGCGCC ACTCGTGCAACCCATGTCACCGGACCCGACTTTGCTCGGCATGATGTTCTTGATGAGTTGGGCTCTGGGAACCGGCTGCA GCCCGCTGTCGGGCAGCAACCTGGCGCTGTGCGTGCGCTACGGCATCCGGTCGCGCGACATGCTGCGCTGGAACCTGCCC TATGCCCTTCTCGGGTGGCTCGCGTGCGGCGTGGTATTCGCCTTGTATGCCGGGTGGCAAGCGGTATGA
Upstream 100 bases:
>100_bases CCTGGTCTGGGGCGTGCTGGAAACCCTGGCCGCGCTTGCCTTGTTCGTCAGCGCCGCTGCCTATGCACGCCGGCGACGTC AGCAACTGCCCGGCTGAGGC
Downstream 100 bases:
>100_bases GCCACCTCCGCGAGATCCATGCCGTCGGCGCGGCGACTTTTGCCGACCTCGACCGCCTGGAGCGCTATCCTGAATGGTAT GACCGTATTCGTTTGAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAIRPSSLLIIAMLALSIACSLLHLPLWPAAVLGWLATLRLGLTLPRASRRQTLWLGLAGVSIWLVALWRDTPTSLATAV SINQPLLMMFAGVSFLSMARPAADDASGGERHGSFWGTLAGVHLFGAVINLSVLFLFGDRMQREGRLTRKQVSVLGRAFP AAAAWSPFFVAMGVALTYSPGLDFLALLPWGGLAAMLLLGLIALDAHRLPGTFIGYPLEKGSLLLPGALASSVVVTHFIW PSLSIPLIIAIASPFFAILLVPSASRRQRLHQQLNEGLPRLGPQFALFLVAGVISSGLAALIASAPDRQLIPLDHFGSFA AWVTQGILVVLAFVGIHPLVGIATLAPLVQPMSPDPTLLGMMFLMSWALGTGCSPLSGSNLALCVRYGIRSRDMLRWNLP YALLGWLACGVVFALYAGWQAV
Sequences:
>Translated_422_residues MAIRPSSLLIIAMLALSIACSLLHLPLWPAAVLGWLATLRLGLTLPRASRRQTLWLGLAGVSIWLVALWRDTPTSLATAV SINQPLLMMFAGVSFLSMARPAADDASGGERHGSFWGTLAGVHLFGAVINLSVLFLFGDRMQREGRLTRKQVSVLGRAFP AAAAWSPFFVAMGVALTYSPGLDFLALLPWGGLAAMLLLGLIALDAHRLPGTFIGYPLEKGSLLLPGALASSVVVTHFIW PSLSIPLIIAIASPFFAILLVPSASRRQRLHQQLNEGLPRLGPQFALFLVAGVISSGLAALIASAPDRQLIPLDHFGSFA AWVTQGILVVLAFVGIHPLVGIATLAPLVQPMSPDPTLLGMMFLMSWALGTGCSPLSGSNLALCVRYGIRSRDMLRWNLP YALLGWLACGVVFALYAGWQAV >Mature_421_residues AIRPSSLLIIAMLALSIACSLLHLPLWPAAVLGWLATLRLGLTLPRASRRQTLWLGLAGVSIWLVALWRDTPTSLATAVS INQPLLMMFAGVSFLSMARPAADDASGGERHGSFWGTLAGVHLFGAVINLSVLFLFGDRMQREGRLTRKQVSVLGRAFPA AAAWSPFFVAMGVALTYSPGLDFLALLPWGGLAAMLLLGLIALDAHRLPGTFIGYPLEKGSLLLPGALASSVVVTHFIWP SLSIPLIIAIASPFFAILLVPSASRRQRLHQQLNEGLPRLGPQFALFLVAGVISSGLAALIASAPDRQLIPLDHFGSFAA WVTQGILVVLAFVGIHPLVGIATLAPLVQPMSPDPTLLGMMFLMSWALGTGCSPLSGSNLALCVRYGIRSRDMLRWNLPY ALLGWLACGVVFALYAGWQAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45004; Mature: 44873
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRPSSLLIIAMLALSIACSLLHLPLWPAAVLGWLATLRLGLTLPRASRRQTLWLGLAG CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHH VSIWLVALWRDTPTSLATAVSINQPLLMMFAGVSFLSMARPAADDASGGERHGSFWGTLA HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH GVHLFGAVINLSVLFLFGDRMQREGRLTRKQVSVLGRAFPAAAAWSPFFVAMGVALTYSP HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHEECC GLDFLALLPWGGLAAMLLLGLIALDAHRLPGTFIGYPLEKGSLLLPGALASSVVVTHFIW CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHC PSLSIPLIIAIASPFFAILLVPSASRRQRLHQQLNEGLPRLGPQFALFLVAGVISSGLAA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LIASAPDRQLIPLDHFGSFAAWVTQGILVVLAFVGIHPLVGIATLAPLVQPMSPDPTLLG HHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH MMFLMSWALGTGCSPLSGSNLALCVRYGIRSRDMLRWNLPYALLGWLACGVVFALYAGWQ HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCC AV CC >Mature Secondary Structure AIRPSSLLIIAMLALSIACSLLHLPLWPAAVLGWLATLRLGLTLPRASRRQTLWLGLAG CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHH VSIWLVALWRDTPTSLATAVSINQPLLMMFAGVSFLSMARPAADDASGGERHGSFWGTLA HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH GVHLFGAVINLSVLFLFGDRMQREGRLTRKQVSVLGRAFPAAAAWSPFFVAMGVALTYSP HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHEECC GLDFLALLPWGGLAAMLLLGLIALDAHRLPGTFIGYPLEKGSLLLPGALASSVVVTHFIW CCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHC PSLSIPLIIAIASPFFAILLVPSASRRQRLHQQLNEGLPRLGPQFALFLVAGVISSGLAA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LIASAPDRQLIPLDHFGSFAAWVTQGILVVLAFVGIHPLVGIATLAPLVQPMSPDPTLLG HHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH MMFLMSWALGTGCSPLSGSNLALCVRYGIRSRDMLRWNLPYALLGWLACGVVFALYAGWQ HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCC AV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA