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The map label for this gene is rfaB [C]

Identifier: 92113818

GI number: 92113818

Start: 1926415

End: 1927569

Strand: Direct

Name: rfaB [C]

Synonym: Csal_1695

Alternate gene names: 92113818

Gene position: 1926415-1927569 (Clockwise)

Preceding gene: 92113817

Following gene: 92113819

Centisome position: 52.11

GC content: 64.59

Gene sequence:

>1155_bases
ATGATACGTACATTGGTGGTCGTGCGTTCCCTGAAGATGGGGGGCATGGAACGGGTGGCGATCAATCTGGCCGATGCCTT
TGCCGAGGCCGGGCACGAGAGCCATCTGGTGGCGCTCCGGCGGGTGAAGGATCCGTTGACCTCTTCCCACAGCGGGGTAC
GTCAGCATCAACTGGCGCTGAGCCGCTGGACCCGGCTGACCGTCATCGGGCTGCTCGCGGAGTTAGTGGCGCGCTGGCTG
CTGAATCCCATTCTCAAGCGGGCGCTGTTTCTGGGCACGGGGCTGATGGGTGGCGTGGTATTTCGTCTGTGGCTCAAGCG
CTTTGAGCGTCGCTACGGTCGGGTGGATCGCATCGTCTTTCGAGGGATCGGCACCTTCGAGCTCGTGTGGACGTTTCGCG
ATGAGCGGGCCTGCTATGTGCTGGAAAACATCTTCCATGCCGAGGGGCCTTGTTGGCGTCGGCGCTTGTTCGCGCGCTGC
CTGTATCAGGGGCGTGAGCTTGTAGCGGTCTCCCAGGGTGTGGCGGAAAGCGTCAAAAAGGCGATGTCCTTTTGGCAATG
CACACCCGCTAGCCTGCGGGTCATCCCCAATCCGTGTCCGATTCCGGCGATACGTGAAGCCATGCAAGCGCCCGAGCCGG
ATCTGCCGGCGGGGCCTTATATCGTCAACGTGGCGCGCCTGGTGCCCGCCAAGGATCACGCCTTGCTGCTGCGCGCCTAT
GCGCGCTCGGGCGTGACCTTGCCGCTGGTGCTGGTCGGCGACGGCCGGGAACGCGAGCGCCTCGAGGCTTTGGCAGGGGA
GCTGGGGATCGCCGAGCGGGTGATCTTCGCGGGGCAGCGGCAGAACCCGTACCCGTGGATGCATCACGCGCGGCTGTTCG
TGCTCAGCTCACGCTTCGAGGGCATGGGCATCGTACTGTTCGAGGCGCTGGCCTGCGGTACGCCGGTGCTGAGCGTGGAT
TGCCCCGGCGGCATTCGCAGCATCCTCAAGGGCGGGCTCGAGGGCAGTGTCGTCCCCCATGACGAGGAAAGCCTGGCGCG
CGGCCTGCAAGCCGCGTTGGAGGGAGAACCGCCCCCGGTGCAGGAGTCATGGTTGGATGACTTCAAGCCCGAAACGGTGG
CCGCACGCTTCATGTATAAACCCGATGCAACGTAA

Upstream 100 bases:

>100_bases
ACGTGCATAACCTCATCGTGGGCGGGCTGGTCACGCATATCTGGCGCTGGCAGCTGGAAAGCGGCCAGCGAGTGTTGGCC
TGGCCGGCGCGGTGGAGCAC

Downstream 100 bases:

>100_bases
GCGTTTTTCCGACATTATATAAGACGTTAGTACTACGCTCCTCATGCGTTAATTGCTATCATGCTAACTATTGATAAAGC
ATGACGATAATGAGGCGTAC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIRTLVVVRSLKMGGMERVAINLADAFAEAGHESHLVALRRVKDPLTSSHSGVRQHQLALSRWTRLTVIGLLAELVARWL
LNPILKRALFLGTGLMGGVVFRLWLKRFERRYGRVDRIVFRGIGTFELVWTFRDERACYVLENIFHAEGPCWRRRLFARC
LYQGRELVAVSQGVAESVKKAMSFWQCTPASLRVIPNPCPIPAIREAMQAPEPDLPAGPYIVNVARLVPAKDHALLLRAY
ARSGVTLPLVLVGDGRERERLEALAGELGIAERVIFAGQRQNPYPWMHHARLFVLSSRFEGMGIVLFEALACGTPVLSVD
CPGGIRSILKGGLEGSVVPHDEESLARGLQAALEGEPPPVQESWLDDFKPETVAARFMYKPDAT

Sequences:

>Translated_384_residues
MIRTLVVVRSLKMGGMERVAINLADAFAEAGHESHLVALRRVKDPLTSSHSGVRQHQLALSRWTRLTVIGLLAELVARWL
LNPILKRALFLGTGLMGGVVFRLWLKRFERRYGRVDRIVFRGIGTFELVWTFRDERACYVLENIFHAEGPCWRRRLFARC
LYQGRELVAVSQGVAESVKKAMSFWQCTPASLRVIPNPCPIPAIREAMQAPEPDLPAGPYIVNVARLVPAKDHALLLRAY
ARSGVTLPLVLVGDGRERERLEALAGELGIAERVIFAGQRQNPYPWMHHARLFVLSSRFEGMGIVLFEALACGTPVLSVD
CPGGIRSILKGGLEGSVVPHDEESLARGLQAALEGEPPPVQESWLDDFKPETVAARFMYKPDAT
>Mature_384_residues
MIRTLVVVRSLKMGGMERVAINLADAFAEAGHESHLVALRRVKDPLTSSHSGVRQHQLALSRWTRLTVIGLLAELVARWL
LNPILKRALFLGTGLMGGVVFRLWLKRFERRYGRVDRIVFRGIGTFELVWTFRDERACYVLENIFHAEGPCWRRRLFARC
LYQGRELVAVSQGVAESVKKAMSFWQCTPASLRVIPNPCPIPAIREAMQAPEPDLPAGPYIVNVARLVPAKDHALLLRAY
ARSGVTLPLVLVGDGRERERLEALAGELGIAERVIFAGQRQNPYPWMHHARLFVLSSRFEGMGIVLFEALACGTPVLSVD
CPGGIRSILKGGLEGSVVPHDEESLARGLQAALEGEPPPVQESWLDDFKPETVAARFMYKPDAT

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42770; Mature: 42770

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTLVVVRSLKMGGMERVAINLADAFAEAGHESHLVALRRVKDPLTSSHSGVRQHQLAL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SRWTRLTVIGLLAELVARWLLNPILKRALFLGTGLMGGVVFRLWLKRFERRYGRVDRIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH
RGIGTFELVWTFRDERACYVLENIFHAEGPCWRRRLFARCLYQGRELVAVSQGVAESVKK
HCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
AMSFWQCTPASLRVIPNPCPIPAIREAMQAPEPDLPAGPYIVNVARLVPAKDHALLLRAY
HHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
ARSGVTLPLVLVGDGRERERLEALAGELGIAERVIFAGQRQNPYPWMHHARLFVLSSRFE
HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCC
GMGIVLFEALACGTPVLSVDCPGGIRSILKGGLEGSVVPHDEESLARGLQAALEGEPPPV
CCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QESWLDDFKPETVAARFMYKPDAT
CHHHHHCCCCCHHHHHEEECCCCC
>Mature Secondary Structure
MIRTLVVVRSLKMGGMERVAINLADAFAEAGHESHLVALRRVKDPLTSSHSGVRQHQLAL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SRWTRLTVIGLLAELVARWLLNPILKRALFLGTGLMGGVVFRLWLKRFERRYGRVDRIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH
RGIGTFELVWTFRDERACYVLENIFHAEGPCWRRRLFARCLYQGRELVAVSQGVAESVKK
HCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
AMSFWQCTPASLRVIPNPCPIPAIREAMQAPEPDLPAGPYIVNVARLVPAKDHALLLRAY
HHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
ARSGVTLPLVLVGDGRERERLEALAGELGIAERVIFAGQRQNPYPWMHHARLFVLSSRFE
HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCC
GMGIVLFEALACGTPVLSVDCPGGIRSILKGGLEGSVVPHDEESLARGLQAALEGEPPPV
CCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QESWLDDFKPETVAARFMYKPDAT
CHHHHHCCCCCHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]