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The map label for this gene is yfbS [C]

Identifier: 92113807

GI number: 92113807

Start: 1912082

End: 1913848

Strand: Direct

Name: yfbS [C]

Synonym: Csal_1684

Alternate gene names: 92113807

Gene position: 1912082-1913848 (Clockwise)

Preceding gene: 92113806

Following gene: 92113808

Centisome position: 51.72

GC content: 64.29

Gene sequence:

>1767_bases
ATGACAGTTGCGGCACTAATAACGTTAGTCTTAATCGTTGCCGTGTTGGCGACATTGGCGCTTACCCGAGTCGCCCCTGA
TGTCGTCCTGATGGCGGCGCTCGCCTTCCTGGTGATCAGCGGTATTCTCACGCCCAGCGAAGCGCTGGCGGGGTTCGCCA
ACCCCGGCGTGATGACCATCGCCACGCTCTACGTGGTCGCGGCGGGGCTGAAGGAAACCGGCGCCATCCAGTGGCTGGCG
CATCGCCTGCTCGGCCAGCCCCGGCGTTTGCGCCAGGCGCAGTTGCGCGTGCTGCTTCCGGCCTCGGGGCTGAGCGCCTT
CATGAACAACACCACCGTGGTGGCCATGTTCATCCCCGCCATTCAGGAATGGGCGGCCCGCCTGCGGTTGCCGACCTCCA
AATTGCTGCTGCCGCTCAGCTACGCCTCGATACTCGGGGGCACCTGCACGCTGATCGGCACCAGCACCAATCTCGTGGTG
GATGGCCTGCTGCAGAGCGAGCGGGGCATCTCGCTGCACATGTTCGAGCTGGCTTGGGTAGGCGTGCCGCTGGTGGTCAT
CGCCGGGGGCTTTCTCTATCTGATGGCGGACCGCCTACTGCCCAACCGCCAGGGGGCGCTGGAACAACTCGAACAGGCAC
GGGAATACGCCGTGGAAGTTCGCGTGATTCCACAAGGCCCCCTGGAAGGCAAGAGCATCGCCGATGCGGGCTTGCGAAGC
CTGGCGCATGGTTACCTGGCGGACATCGAGCGTGACGGCGAGTTGATGACCGCCGTGCCGCCGGAAACCAAGCTGCAGGC
CGATGACATCCTCGTCTTCGTCGGTGCTCCCGAATGCGCCCGGGAGTTGCGCCGTGTCCACGGCCTGCGCCCGGCCAATG
GCGACGTGCGCAAGCTGGATATCGCCCACCACCGGCGCTGCCTGGTCGAGGCCGTGATCGGCCCGGATTTCACCGGGATC
GAGCAGACGGTGCGCGAATCGCGCTTTCGCTCGCGCTATCAGGCGGTGATCCTTTCCATCTCCCGCCATGGCCGCCGCTT
GCCCGGCAAGCTGGGGGATATTCGCCTTCAGGTGGGCGATACGTTATTGATGGAGACCGCCCAGGAATTCGTCTCGCAAT
ATCAGTACCGCAAGGATTTTCTGCTCGTCAGCGCGCTCAACGACTCCACGCCGCCGGATTTTCGCAAGGCGCCCTGGGCG
TTGGGCATTCTCGGCGCCATGGTGCTGGTGAGCGCCACGGGGCTGTTGAGCATCCTCGAGGCGGCGTTTCTGGCCGGCGG
CGCCATGCTGCTCACGCGCTGCGTCACGGCGAGCAAGGCACGGCGCTATCTGGAGCTTTCGGTGCTCATCGTCATCGCCG
CCTCGTTCGCCCTGGGCAACGCCATGGACAAGACCGGCGCCGCAAGCCAGATCGCGCAATGGCTATTGCTGGCGGATGGC
CTCTCGCCCTGGATGGCCCTGGCCATGGTCTACGCCCTGACCGTCGCCTTCACCGAGCTGATCACCAATAACGCCGCCGC
CGTGTTGATGTTTCCGGTGGCCGCCGCCGTGGCCGAGCAACTGGGCGTGAGTATCATGCCCTTTGCCATCGGCATCATGT
TCGCTGCCTCGGCCAGTTTCATGACCCCGCTGGGCTATCAGACCAATCTCATGGTGCTTGGCCCCGGCGGGTATCGTTTC
GTGGATTACCTGCGCCTCGGCGCGCCCATGAGCCTGTTGGTCGGGGGCATCGTAATAGGGTTAGTGCCGTTTGTTTGGAA
TTTTTAA

Upstream 100 bases:

>100_bases
TGCAGTTTTCTGGCTCAGTCTGCCGAAGCCTCAAAGAGTCCTGAGTGATTCTTATCTTGTGCTGCGCCTGCTAAATATCG
ATACATTAAGCGATTGATCC

Downstream 100 bases:

>100_bases
TGTCTATTAAGCATTATGTGAGCGGCGAAATGTTTTTGGCCTTAATGCGTACTTCTCTGGCGCGCGGTATTGCTGCATTA
GGCACGTTACTGTTAGGTAT

Product: TrkA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTVAALITLVLIVAVLATLALTRVAPDVVLMAALAFLVISGILTPSEALAGFANPGVMTIATLYVVAAGLKETGAIQWLA
HRLLGQPRRLRQAQLRVLLPASGLSAFMNNTTVVAMFIPAIQEWAARLRLPTSKLLLPLSYASILGGTCTLIGTSTNLVV
DGLLQSERGISLHMFELAWVGVPLVVIAGGFLYLMADRLLPNRQGALEQLEQAREYAVEVRVIPQGPLEGKSIADAGLRS
LAHGYLADIERDGELMTAVPPETKLQADDILVFVGAPECARELRRVHGLRPANGDVRKLDIAHHRRCLVEAVIGPDFTGI
EQTVRESRFRSRYQAVILSISRHGRRLPGKLGDIRLQVGDTLLMETAQEFVSQYQYRKDFLLVSALNDSTPPDFRKAPWA
LGILGAMVLVSATGLLSILEAAFLAGGAMLLTRCVTASKARRYLELSVLIVIAASFALGNAMDKTGAASQIAQWLLLADG
LSPWMALAMVYALTVAFTELITNNAAAVLMFPVAAAVAEQLGVSIMPFAIGIMFAASASFMTPLGYQTNLMVLGPGGYRF
VDYLRLGAPMSLLVGGIVIGLVPFVWNF

Sequences:

>Translated_588_residues
MTVAALITLVLIVAVLATLALTRVAPDVVLMAALAFLVISGILTPSEALAGFANPGVMTIATLYVVAAGLKETGAIQWLA
HRLLGQPRRLRQAQLRVLLPASGLSAFMNNTTVVAMFIPAIQEWAARLRLPTSKLLLPLSYASILGGTCTLIGTSTNLVV
DGLLQSERGISLHMFELAWVGVPLVVIAGGFLYLMADRLLPNRQGALEQLEQAREYAVEVRVIPQGPLEGKSIADAGLRS
LAHGYLADIERDGELMTAVPPETKLQADDILVFVGAPECARELRRVHGLRPANGDVRKLDIAHHRRCLVEAVIGPDFTGI
EQTVRESRFRSRYQAVILSISRHGRRLPGKLGDIRLQVGDTLLMETAQEFVSQYQYRKDFLLVSALNDSTPPDFRKAPWA
LGILGAMVLVSATGLLSILEAAFLAGGAMLLTRCVTASKARRYLELSVLIVIAASFALGNAMDKTGAASQIAQWLLLADG
LSPWMALAMVYALTVAFTELITNNAAAVLMFPVAAAVAEQLGVSIMPFAIGIMFAASASFMTPLGYQTNLMVLGPGGYRF
VDYLRLGAPMSLLVGGIVIGLVPFVWNF
>Mature_587_residues
TVAALITLVLIVAVLATLALTRVAPDVVLMAALAFLVISGILTPSEALAGFANPGVMTIATLYVVAAGLKETGAIQWLAH
RLLGQPRRLRQAQLRVLLPASGLSAFMNNTTVVAMFIPAIQEWAARLRLPTSKLLLPLSYASILGGTCTLIGTSTNLVVD
GLLQSERGISLHMFELAWVGVPLVVIAGGFLYLMADRLLPNRQGALEQLEQAREYAVEVRVIPQGPLEGKSIADAGLRSL
AHGYLADIERDGELMTAVPPETKLQADDILVFVGAPECARELRRVHGLRPANGDVRKLDIAHHRRCLVEAVIGPDFTGIE
QTVRESRFRSRYQAVILSISRHGRRLPGKLGDIRLQVGDTLLMETAQEFVSQYQYRKDFLLVSALNDSTPPDFRKAPWAL
GILGAMVLVSATGLLSILEAAFLAGGAMLLTRCVTASKARRYLELSVLIVIAASFALGNAMDKTGAASQIAQWLLLADGL
SPWMALAMVYALTVAFTELITNNAAAVLMFPVAAAVAEQLGVSIMPFAIGIMFAASASFMTPLGYQTNLMVLGPGGYRFV
DYLRLGAPMSLLVGGIVIGLVPFVWNF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=612, Percent_Identity=30.2287581699346, Blast_Score=219, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 63090; Mature: 62959

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAALITLVLIVAVLATLALTRVAPDVVLMAALAFLVISGILTPSEALAGFANPGVMTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHH
ATLYVVAAGLKETGAIQWLAHRLLGQPRRLRQAQLRVLLPASGLSAFMNNTTVVAMFIPA
HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCHHHHHHHCCCEEEEHHHHH
IQEWAARLRLPTSKLLLPLSYASILGGTCTLIGTSTNLVVDGLLQSERGISLHMFELAWV
HHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCEEEEHHHHHH
GVPLVVIAGGFLYLMADRLLPNRQGALEQLEQAREYAVEVRVIPQGPLEGKSIADAGLRS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHH
LAHGYLADIERDGELMTAVPPETKLQADDILVFVGAPECARELRRVHGLRPANGDVRKLD
HHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEH
IAHHRRCLVEAVIGPDFTGIEQTVRESRFRSRYQAVILSISRHGRRLPGKLGDIRLQVGD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCH
TLLMETAQEFVSQYQYRKDFLLVSALNDSTPPDFRKAPWALGILGAMVLVSATGLLSILE
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
AAFLAGGAMLLTRCVTASKARRYLELSVLIVIAASFALGNAMDKTGAASQIAQWLLLADG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
LSPWMALAMVYALTVAFTELITNNAAAVLMFPVAAAVAEQLGVSIMPFAIGIMFAASASF
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MTPLGYQTNLMVLGPGGYRFVDYLRLGAPMSLLVGGIVIGLVPFVWNF
CCCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVAALITLVLIVAVLATLALTRVAPDVVLMAALAFLVISGILTPSEALAGFANPGVMTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHH
ATLYVVAAGLKETGAIQWLAHRLLGQPRRLRQAQLRVLLPASGLSAFMNNTTVVAMFIPA
HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHEEEECCHHHHHHHCCCEEEEHHHHH
IQEWAARLRLPTSKLLLPLSYASILGGTCTLIGTSTNLVVDGLLQSERGISLHMFELAWV
HHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCEEEEHHHHHH
GVPLVVIAGGFLYLMADRLLPNRQGALEQLEQAREYAVEVRVIPQGPLEGKSIADAGLRS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHH
LAHGYLADIERDGELMTAVPPETKLQADDILVFVGAPECARELRRVHGLRPANGDVRKLD
HHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEH
IAHHRRCLVEAVIGPDFTGIEQTVRESRFRSRYQAVILSISRHGRRLPGKLGDIRLQVGD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCH
TLLMETAQEFVSQYQYRKDFLLVSALNDSTPPDFRKAPWALGILGAMVLVSATGLLSILE
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
AAFLAGGAMLLTRCVTASKARRYLELSVLIVIAASFALGNAMDKTGAASQIAQWLLLADG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
LSPWMALAMVYALTVAFTELITNNAAAVLMFPVAAAVAEQLGVSIMPFAIGIMFAASASF
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MTPLGYQTNLMVLGPGGYRFVDYLRLGAPMSLLVGGIVIGLVPFVWNF
CCCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]