Click here to switch to the map view.

The map label for this gene is 92113804

Identifier: 92113804

GI number: 92113804

Start: 1908964

End: 1910061

Strand: Direct

Name: 92113804

Synonym: Csal_1681

Alternate gene names: NA

Gene position: 1908964-1910061 (Clockwise)

Preceding gene: 92113800

Following gene: 92113805

Centisome position: 51.64

GC content: 60.75

Gene sequence:

>1098_bases
ATGTCCATGGAATACGCTCGTCATGACGATGACGAGATCGACTTATCTCAACTTCTCAATCACCTGATCGACGGCTGGTA
CTGGATCGTGGGGTGCGTGGTGGCAGCCTTGGTGCTGGCGGGCGCGTATCTCGCCATGACCACGCCCCAATACGAAACCT
CGTTTCGGGCCACGCCGGCGGCATCGTCCAATTTCGCTGGCATGAACCTGCTCTCAGGGTTCTCGGTCTCGCCGCAGGAT
GCCTACACCACGCTGGGTAACCGCCTGAGCAGTTTCCAGAACTTCCAGGAGTACGTCAGGTCTCATCGCGAGGCCTTCGT
GATCCCCGAAGGCGCCTCGCTTGGGAGTCTCTTCACGAACCGACTCGACATCACCGGCCTGACCTCCGAGGTCAATGGGG
CCAGCGAGTTGAGTCTGACCTACCGTTACCCCGAAGGTGAATCGGGTCACCGGATTCTCAACGGCTACGTCAACGCCACC
GCCGAACAGGTCTGGAGCGAACTCAAGAACCGCTTCGCCCGGGCCAACCAGGCCAAGATCGCGGCCCTCAACACACGTCT
GCAGGTCGGTGAGGACAAGCTGCTCGCCGAGCGCGAGCACCGCCTGTTCGCGCTGGACAACGCCATCAGCACTGCACGGG
CCCTGGGCATCGAAGCGCCCACTACGCCCCAGGAATTCGGCCAGCTCAATCCCAATAAAGAAGTGATCTACACCTCGCTT
TCCGGCGATGGCCTGCCGCTGTACTTCATGGGCTACAAGACCCTCGAGGCCGAACGTGAAACTTTGAAAGGCAAACTGCA
TGACGGCCTCAGCAACGGTACGCTTCGCAACATCCGCGAAGAGCTCGAACAGCGCCACCAAATTGCCGACATGCTCAAGA
ACGATAGCTTCTATCCGCTGGAAGAAGGCGTCTCCGAGCATCCCGACGAGCGTGTGGTCAGTGTGATCGAACGCGCCTAC
CCGCAAGACGCTCCCGTGAAGCCACGCTCCGCACTCGTGCTCGCGTTGGCCGTGATTCTCGGTGGCATGCTGGGCGTGTT
CCTGGTCTTCATGAAGGCAGGGCTGGGGGCGGTGCTGCGGCAGCGTCGTCAGGCGTAA

Upstream 100 bases:

>100_bases
CATGACGACGCAATCGACACGTCGTCGATGAGACATGAGCCATAAAGGGAAGCGCCCATTCTCCACCTGCCGAATGGGCG
CACATTGAAGGTACGCGGTT

Downstream 100 bases:

>100_bases
TCCCATGATGGGCTTTCTCACCGCGCCATGGCGTTGGCCATGGCGCCGGACCATCGTGTGCTTGATGAAGCGACTGGCCA
TCCGCTGGCCCTGGCTGCTG

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Chain Length Determinant Protein

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPAASSNFAGMNLLSGFSVSPQD
AYTTLGNRLSSFQNFQEYVRSHREAFVIPEGASLGSLFTNRLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNAT
AEQVWSELKNRFARANQAKIAALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAPTTPQEFGQLNPNKEVIYTSL
SGDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIREELEQRHQIADMLKNDSFYPLEEGVSEHPDERVVSVIERAY
PQDAPVKPRSALVLALAVILGGMLGVFLVFMKAGLGAVLRQRRQA

Sequences:

>Translated_365_residues
MSMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPAASSNFAGMNLLSGFSVSPQD
AYTTLGNRLSSFQNFQEYVRSHREAFVIPEGASLGSLFTNRLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNAT
AEQVWSELKNRFARANQAKIAALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAPTTPQEFGQLNPNKEVIYTSL
SGDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIREELEQRHQIADMLKNDSFYPLEEGVSEHPDERVVSVIERAY
PQDAPVKPRSALVLALAVILGGMLGVFLVFMKAGLGAVLRQRRQA
>Mature_364_residues
SMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPAASSNFAGMNLLSGFSVSPQDA
YTTLGNRLSSFQNFQEYVRSHREAFVIPEGASLGSLFTNRLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNATA
EQVWSELKNRFARANQAKIAALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAPTTPQEFGQLNPNKEVIYTSLS
GDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIREELEQRHQIADMLKNDSFYPLEEGVSEHPDERVVSVIERAYP
QDAPVKPRSALVLALAVILGGMLGVFLVFMKAGLGAVLRQRRQA

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40391; Mature: 40260

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00387 PPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ASSNFAGMNLLSGFSVSPQDAYTTLGNRLSSFQNFQEYVRSHREAFVIPEGASLGSLFTN
CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH
RLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNATAEQVWSELKNRFARANQAKI
CCCCEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAPTTPQEFGQLNPNKEVIYTSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEE
SGDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIREELEQRHQIADMLKNDSFYPL
CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
EEGVSEHPDERVVSVIERAYPQDAPVKPRSALVLALAVILGGMLGVFLVFMKAGLGAVLR
HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRRQA
HHHCC
>Mature Secondary Structure 
SMEYARHDDDEIDLSQLLNHLIDGWYWIVGCVVAALVLAGAYLAMTTPQYETSFRATPA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ASSNFAGMNLLSGFSVSPQDAYTTLGNRLSSFQNFQEYVRSHREAFVIPEGASLGSLFTN
CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH
RLDITGLTSEVNGASELSLTYRYPEGESGHRILNGYVNATAEQVWSELKNRFARANQAKI
CCCCEECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AALNTRLQVGEDKLLAEREHRLFALDNAISTARALGIEAPTTPQEFGQLNPNKEVIYTSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEE
SGDGLPLYFMGYKTLEAERETLKGKLHDGLSNGTLRNIREELEQRHQIADMLKNDSFYPL
CCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
EEGVSEHPDERVVSVIERAYPQDAPVKPRSALVLALAVILGGMLGVFLVFMKAGLGAVLR
HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRRQA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA