Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92113788
Identifier: 92113788
GI number: 92113788
Start: 1892482
End: 1894296
Strand: Direct
Name: 92113788
Synonym: Csal_1664
Alternate gene names: NA
Gene position: 1892482-1894296 (Clockwise)
Preceding gene: 92113787
Following gene: 92113789
Centisome position: 51.19
GC content: 67.05
Gene sequence:
>1815_bases ATGTTGCACCATGCCGGGTCGGCTTCCGCCCGCGCCCAACGCGGCGCCATCGGTCTGCTCGCCATGGGCGTGCTCGGGCT GGTGATCCTGTGCCTGGTGCTGGCGCTGGATGTCGGGCGGCTGTACTACGAAAAGGCCCGGCTCCAGAAACTCGCCGATA CCGCCGCCATGGAAGCGGCGGCGGCCCTGGCAAGAACGCAGGACATGAGCACGTTGCGCGAGATGGCCGCCGCCAACCTG GCGCGCAGCGAGGGCGACGGCGCGGCGCTCACCCTGCAACGCGGCACGATCGCGGTCGACGATGGGATCAACGTCTTCGT CGCCGAGGAGGCCCCCACCAGCGACGCGGTCCGGGTGGTGCTGCGCCAGTCGGTGCCGACCAGCCTGATCGTCAATGTCG AACGTCTTTTCTCCGACCGGGACATCGAAGACACGCGGACGCTCAGCACCGCGTCGGTGGCGCGGCGCACGCCCGTGGCC GCGCTCGCCATGGGCACGCAGCTGTTGTCCGTCGACGGCGATACGGCGTTGCTGCAACCCGTGCTGGCGGCGCTGGGGGC GGATCTCGATCTCGGCCTGGTGGGCTACGAAGGCCTGGCGCGCACCCAGGTGACGCTGCTGGAACTGGCGCGCGAACTCT CCGGGGTCGGCGTCGATCTCTCCGCCGCGAGCATCGATGACGTCCTGAACACGACGCTCACGGTCGGCGAACTGGCGGAC GCCAGCCTCAATATCCTGCGTGGCGCGGGCAACGACGATGCGCTGGTGGGCCTGCAACCCGCCAATGGCGCCATCGGCCT GGGAGACGTGATCGCCGCGCTGGAGAACTTCACCGGCGGGCTCACCGGCAAGGCGCTGGATGTGCCCGTGCGGCTCGGCG ACCTGCTGGCGGTGGATCTCGAATCCCCCCAGCGGGAGAACGCCTTGTTCGCCGGCATAGGACTCGACAATCTGCTGAGC ACGGCCCTGATGGCTGCCAATCGAGACAGCGGCATCCATCTCGACGATCTCGACCTCAATGTCGGGCAGTTGGCGTCGCT GGAGCTGGATCTCGATATCATCGAGCCACCGCAAATCGCCGTGGGACCGGTGGGGTGCGAAACGCCCGACGTGGGGGCCT GCAGCGAATGGCGCAGCGAGGCGAAAACGGCCCAGCTCGATCTCGATGTGAGCGCGGCGGTCGATGTCATCGGCCTGGTA ACGCTGGATCTGGACCTGGCGCTTGAATCCGCCTCGGCAAGCGGCGGTATCGAATCCGTCGTCCCCCTGGGCAACCAGCG CTACGACGTAGGCGTCCAGGCCCGCTCGGCGTTGCTGACGAGCACCGCCGAGGTGGAACTGAGCCTGCTGAAATTCGCCG ATGTGCTCTCTCTGAGCCTCGACAACAACGAAAGCAGCCAGACCCCCACCGCCGCCGGCACGATATATCGCGGCACCCTG AATGATTGGCCTGAACGCACCACGCTGAGCTTCGGCGAAGGCATCGGTAGCGTCTCCGGGCTGGTGGGGCCGCTGCTGAC GGAATCGAACATCGAACTGTCCCTGCTCGGTAGCGGTGATGAACCGTGCAGCGGCCTGCTGGGGTGCCTGGGGCAGGGCA TCGAGGACCTGCTGAACGAGGCGTTGGACTCCGTGAGTGACTTGCTGGCGGCGCTGACGGCAGGACTCGACGAGGTCCTC GATAACGTGCTGGCACCGCTTGTCGATCCCTTGCTGGACGCGCTGGGGCTGCGACTCAACGGCGTGGATGCCGACGTGCT CGGTGTGGGCTACGGCAAAGTCGAATTGATCCGAGTGGGAGACCCCGATGCGTGA
Upstream 100 bases:
>100_bases CGGCCCCGTGCAAACGGCCATCTGGGAGCGCTACGTGGAAAGCTTCCGCCAGGCGATTCCCGACCGCTACATCGACACCG ACGACTACGGGAGTCAGTGA
Downstream 100 bases:
>100_bases ATCGACTCATCTCAAGCGGGCGAGGCGCAAGCGCCAGTCCGGTGTGGCGGCCATCGAGTTCGCCATCGTCTTTCCGGTGT TCTTTCTCGTGCTCTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MLHHAGSASARAQRGAIGLLAMGVLGLVILCLVLALDVGRLYYEKARLQKLADTAAMEAAAALARTQDMSTLREMAAANL ARSEGDGAALTLQRGTIAVDDGINVFVAEEAPTSDAVRVVLRQSVPTSLIVNVERLFSDRDIEDTRTLSTASVARRTPVA ALAMGTQLLSVDGDTALLQPVLAALGADLDLGLVGYEGLARTQVTLLELARELSGVGVDLSAASIDDVLNTTLTVGELAD ASLNILRGAGNDDALVGLQPANGAIGLGDVIAALENFTGGLTGKALDVPVRLGDLLAVDLESPQRENALFAGIGLDNLLS TALMAANRDSGIHLDDLDLNVGQLASLELDLDIIEPPQIAVGPVGCETPDVGACSEWRSEAKTAQLDLDVSAAVDVIGLV TLDLDLALESASASGGIESVVPLGNQRYDVGVQARSALLTSTAEVELSLLKFADVLSLSLDNNESSQTPTAAGTIYRGTL NDWPERTTLSFGEGIGSVSGLVGPLLTESNIELSLLGSGDEPCSGLLGCLGQGIEDLLNEALDSVSDLLAALTAGLDEVL DNVLAPLVDPLLDALGLRLNGVDADVLGVGYGKVELIRVGDPDA
Sequences:
>Translated_604_residues MLHHAGSASARAQRGAIGLLAMGVLGLVILCLVLALDVGRLYYEKARLQKLADTAAMEAAAALARTQDMSTLREMAAANL ARSEGDGAALTLQRGTIAVDDGINVFVAEEAPTSDAVRVVLRQSVPTSLIVNVERLFSDRDIEDTRTLSTASVARRTPVA ALAMGTQLLSVDGDTALLQPVLAALGADLDLGLVGYEGLARTQVTLLELARELSGVGVDLSAASIDDVLNTTLTVGELAD ASLNILRGAGNDDALVGLQPANGAIGLGDVIAALENFTGGLTGKALDVPVRLGDLLAVDLESPQRENALFAGIGLDNLLS TALMAANRDSGIHLDDLDLNVGQLASLELDLDIIEPPQIAVGPVGCETPDVGACSEWRSEAKTAQLDLDVSAAVDVIGLV TLDLDLALESASASGGIESVVPLGNQRYDVGVQARSALLTSTAEVELSLLKFADVLSLSLDNNESSQTPTAAGTIYRGTL NDWPERTTLSFGEGIGSVSGLVGPLLTESNIELSLLGSGDEPCSGLLGCLGQGIEDLLNEALDSVSDLLAALTAGLDEVL DNVLAPLVDPLLDALGLRLNGVDADVLGVGYGKVELIRVGDPDA >Mature_604_residues MLHHAGSASARAQRGAIGLLAMGVLGLVILCLVLALDVGRLYYEKARLQKLADTAAMEAAAALARTQDMSTLREMAAANL ARSEGDGAALTLQRGTIAVDDGINVFVAEEAPTSDAVRVVLRQSVPTSLIVNVERLFSDRDIEDTRTLSTASVARRTPVA ALAMGTQLLSVDGDTALLQPVLAALGADLDLGLVGYEGLARTQVTLLELARELSGVGVDLSAASIDDVLNTTLTVGELAD ASLNILRGAGNDDALVGLQPANGAIGLGDVIAALENFTGGLTGKALDVPVRLGDLLAVDLESPQRENALFAGIGLDNLLS TALMAANRDSGIHLDDLDLNVGQLASLELDLDIIEPPQIAVGPVGCETPDVGACSEWRSEAKTAQLDLDVSAAVDVIGLV TLDLDLALESASASGGIESVVPLGNQRYDVGVQARSALLTSTAEVELSLLKFADVLSLSLDNNESSQTPTAAGTIYRGTL NDWPERTTLSFGEGIGSVSGLVGPLLTESNIELSLLGSGDEPCSGLLGCLGQGIEDLLNEALDSVSDLLAALTAGLDEVL DNVLAPLVDPLLDALGLRLNGVDADVLGVGYGKVELIRVGDPDA
Specific function: Unknown
COG id: COG4655
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62120; Mature: 62120
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHHAGSASARAQRGAIGLLAMGVLGLVILCLVLALDVGRLYYEKARLQKLADTAAMEAA CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALARTQDMSTLREMAAANLARSEGDGAALTLQRGTIAVDDGINVFVAEEAPTSDAVRVV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCEEEEECCCCCHHHHHHH LRQSVPTSLIVNVERLFSDRDIEDTRTLSTASVARRTPVAALAMGTQLLSVDGDTALLQP HHHCCCHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCHHHHHH VLAALGADLDLGLVGYEGLARTQVTLLELARELSGVGVDLSAASIDDVLNTTLTVGELAD HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEHHHHCC ASLNILRGAGNDDALVGLQPANGAIGLGDVIAALENFTGGLTGKALDVPVRLGDLLAVDL CCHHEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCEEECCEEEEEC ESPQRENALFAGIGLDNLLSTALMAANRDSGIHLDDLDLNVGQLASLELDLDIIEPPQIA CCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCEE VGPVGCETPDVGACSEWRSEAKTAQLDLDVSAAVDVIGLVTLDLDLALESASASGGIESV ECCCCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHEEEHHHHEECCCCCCCCCHH VPLGNQRYDVGVQARSALLTSTAEVELSLLKFADVLSLSLDNNESSQTPTAAGTIYRGTL CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCC NDWPERTTLSFGEGIGSVSGLVGPLLTESNIELSLLGSGDEPCSGLLGCLGQGIEDLLNE CCCCCCCEEHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH ALDSVSDLLAALTAGLDEVLDNVLAPLVDPLLDALGLRLNGVDADVLGVGYGKVELIRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEECCCEEEEEECC DPDA CCCC >Mature Secondary Structure MLHHAGSASARAQRGAIGLLAMGVLGLVILCLVLALDVGRLYYEKARLQKLADTAAMEAA CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALARTQDMSTLREMAAANLARSEGDGAALTLQRGTIAVDDGINVFVAEEAPTSDAVRVV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCEEEEECCCCCHHHHHHH LRQSVPTSLIVNVERLFSDRDIEDTRTLSTASVARRTPVAALAMGTQLLSVDGDTALLQP HHHCCCHHHHEEHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCHHHHHH VLAALGADLDLGLVGYEGLARTQVTLLELARELSGVGVDLSAASIDDVLNTTLTVGELAD HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEHHHHCC ASLNILRGAGNDDALVGLQPANGAIGLGDVIAALENFTGGLTGKALDVPVRLGDLLAVDL CCHHEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCEEECCEEEEEC ESPQRENALFAGIGLDNLLSTALMAANRDSGIHLDDLDLNVGQLASLELDLDIIEPPQIA CCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCEE VGPVGCETPDVGACSEWRSEAKTAQLDLDVSAAVDVIGLVTLDLDLALESASASGGIESV ECCCCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHEEEHHHHEECCCCCCCCCHH VPLGNQRYDVGVQARSALLTSTAEVELSLLKFADVLSLSLDNNESSQTPTAAGTIYRGTL CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCC NDWPERTTLSFGEGIGSVSGLVGPLLTESNIELSLLGSGDEPCSGLLGCLGQGIEDLLNE CCCCCCCEEHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH ALDSVSDLLAALTAGLDEVLDNVLAPLVDPLLDALGLRLNGVDADVLGVGYGKVELIRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEECCCEEEEEECC DPDA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA