Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92113741
Identifier: 92113741
GI number: 92113741
Start: 1838380
End: 1838913
Strand: Direct
Name: 92113741
Synonym: Csal_1617
Alternate gene names: NA
Gene position: 1838380-1838913 (Clockwise)
Preceding gene: 92113740
Following gene: 92113742
Centisome position: 49.73
GC content: 67.79
Gene sequence:
>534_bases ATGCCCACACTCGCTGAGCCCATCGTCTGGCTGGTAGGGGCCGGCGGCCCCGTGCTGGTGGTGATCGCCCTGGTCGCCAT GGCCCTGTTCGCCATGGGGCTGGAACGCGGCCTCTACTGGCAGTTCGTGCATCGGCGTCGGCGTCGTGCGCTGGTCTCGC GCTGGGTCGCGCGACATGACCATCTGAGCTGGAGCGCGCTGACGCTGCGCGAAGTATGGACCCAGGAACTCATCGGCCAG CTGCGGCGCCCCTTGCCATGGCTCAAGTTGCTGGTCGGGCTGTGCCCGTTGCTGGGACTGCTGGGCACGGTTACCGGGAT GATCCAGGTCTTCGACAGCCTGTCGCTGACCGAGGCCAATCAGGCGCGCGCCATGGCCGATGGCGTGGCGCGCGCCACGC TGCCGACCCTGACCGGGATGGCGGTTGCCGTGGTGGGGCTGTTGTTCACCACACGACTCGAACACGTGATTCGGCGCGAG GACCAGCGGTTGCATGACCGCATGGCGCGTGCCGTGGAGGATGCCAATGCGTAG
Upstream 100 bases:
>100_bases AGCCGCAGCCGCGAGTTGCTCGGCACCCTCGAAGGGCGCGCCAGCGCCGTGCTTGCCGAGCATCTCGAAACGCCCGACGG CCACACGGGAACGCAGGCCC
Downstream 100 bases:
>100_bases GCGTCGACTACAGGACGTCAACGACGACGCCCAGGAGATCAACCTCACGCCGATGCTCGACGTGGTGTTCATCATGTTGA TCTTCTTCATCGTGACGACC
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel; Biopolymer Transport; NB System Transport Protein ExbB; NB System Biopolymer Transport Component; LQ Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPTLAEPIVWLVGAGGPVLVVIALVAMALFAMGLERGLYWQFVHRRRRRALVSRWVARHDHLSWSALTLREVWTQELIGQ LRRPLPWLKLLVGLCPLLGLLGTVTGMIQVFDSLSLTEANQARAMADGVARATLPTLTGMAVAVVGLLFTTRLEHVIRRE DQRLHDRMARAVEDANA
Sequences:
>Translated_177_residues MPTLAEPIVWLVGAGGPVLVVIALVAMALFAMGLERGLYWQFVHRRRRRALVSRWVARHDHLSWSALTLREVWTQELIGQ LRRPLPWLKLLVGLCPLLGLLGTVTGMIQVFDSLSLTEANQARAMADGVARATLPTLTGMAVAVVGLLFTTRLEHVIRRE DQRLHDRMARAVEDANA >Mature_176_residues PTLAEPIVWLVGAGGPVLVVIALVAMALFAMGLERGLYWQFVHRRRRRALVSRWVARHDHLSWSALTLREVWTQELIGQL RRPLPWLKLLVGLCPLLGLLGTVTGMIQVFDSLSLTEANQARAMADGVARATLPTLTGMAVAVVGLLFTTRLEHVIRRED QRLHDRMARAVEDANA
Specific function: Unknown
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19717; Mature: 19586
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLAEPIVWLVGAGGPVLVVIALVAMALFAMGLERGLYWQFVHRRRRRALVSRWVARHD CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HLSWSALTLREVWTQELIGQLRRPLPWLKLLVGLCPLLGLLGTVTGMIQVFDSLSLTEAN CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QARAMADGVARATLPTLTGMAVAVVGLLFTTRLEHVIRREDQRLHDRMARAVEDANA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTLAEPIVWLVGAGGPVLVVIALVAMALFAMGLERGLYWQFVHRRRRRALVSRWVARHD CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HLSWSALTLREVWTQELIGQLRRPLPWLKLLVGLCPLLGLLGTVTGMIQVFDSLSLTEAN CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QARAMADGVARATLPTLTGMAVAVVGLLFTTRLEHVIRREDQRLHDRMARAVEDANA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA