Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
---|---|
Accession | NC_007963 |
Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is 92112341
Identifier: 92112341
GI number: 92112341
Start: 227955
End: 230618
Strand: Direct
Name: 92112341
Synonym: Csal_0206
Alternate gene names: NA
Gene position: 227955-230618 (Clockwise)
Preceding gene: 92112340
Following gene: 92112342
Centisome position: 6.17
GC content: 58.03
Gene sequence:
>2664_bases ATGGGTAGTGTTCTCGATCCCTTGAGTATCGGGCAAAGCGTGGGCGACCGGCTGTCGGCATTGCCGCAGACCGATGACGA CGGCACCACGGTGGACTGCAAGAAATCGATCAACATTCTTCCGTTGCGATACAGCGCCATCTACGCGGAGGAGGAAGATA GAGCCGCCTTGGGCAGTGTGCCTGAGTACCGGGGAGATCCGGTGTCGGACATCGGCTTGTCGCAAGCCAAGTATACGGCT CGCTTTCTGCGAGAGGGCTACCTGTACGTGCTGGTCAACCGGCTGGGTACCTACCGCTGGGAGCATTGCTACTACGTTTC CGCCGACGCGCTACTGTCTCGCATCAACCCTTACGAGCCCACGAAAGAAAGCGGTGGCATATCTTACTTTGCCATCAATG ACGTGGAGGACGTATCAGAGGGGTATATGCTCTTTCTGCCGGACCCGCTGAGCGTACGAATGCTCGAACGGCTCAAGTCG AACGCGCATCTGCGAGAGTCCCTGCAGCGCTTCGCCATCGCCGAGCTGGCCCACAGCTGCAGCGGAGAGAGTGTCATTCC GCCAACGATGTTGCAGTCCGAGGTTGCCGAGTTCGTCGGCTATCAAGATGAAAGCGTCGGTCATTTGTTGCAGAAACAGA CGTTTCCGTCGTTGACTGATCCGTTCGACGAAGACGCTCAGCCTGCCGATTTACAAAGGTACTGGTCGCGCTTCGAAAGT CTGCAACGTGCGCTGGAGGGGCTTCAGGGATTTGCGGTCGTACTGGCCGACCCCATCGGCATTACCCAGGAACTGAACAA CCATCGCAACGATGCGCTGGAACCGCTCAAGGACTGGATGGAAAAAGAGGATGAGGATGGGCTTTCCAACGAGCAGCGTT TCTACACCTCGGAGCTGATTCGCAATCTGCGCCAGAATTATGTGGAAGGGCGAATCAATAGCCTGGCGCAACGAGACGTC AGGCGGTTCAGGCTCCAGGTAGGCAATCGTTATCTGCCGCACGTCCGTGCCGTCGGCGAGGCCGAGATTGGTGGGAACCG TCAGCCGACTGCACGCGACTACGAGCTGGCCGAGGAGTACGAGGAGCGGCAGGCGGAGATTCTCGAATCGAGCTCCCAGC GAATCACGGCGGAACGTGGCGAGGAGTTTCGCCAGGAATACGATAGCCAGTATGCGCCGCTGCTGGATCAGAATGCACGC AAGGCTTTCGACGATAGCATGGCCAAGCAGTCCCAGATCCAGGAAGTCCTGATGGCCCACAGAGTGTCGGATCATCTTGC CTGGCTGCAAAGCACGTCGTTTCTCGATGCTTTGGACTATTACGACTCTCGCGACCCGATCTGGGGCTGGGCTTACAGCA TTCAGGTCGTGCAGGCCACGGTTGGCATGGAGGGCACCGAAGAAGGCGCTGCGCTGCTGGACCAGTGGTGGCGTGACATG AACATGAATGATCGCTCGAATCTGGCCTGGGCGGTCTACTGTCTCAATCAGTACGATATCCGCCGTGCTGGGCAGCAGGA TATCGACGCGTTCCGTGCCAAGGAGACGCGTGTCGCCGACACCGACGACGACAGTTGGATGGGGCCGGAACCTCAGAACA TCCTGCAAGGGTTCAAGCATCTCACCACGGCGTTCAATACGGCCAACGCGGCGCTGGAGGGAGAGTCGCCTTCATGGTTC CGCACCAACAGACTGGGCGTCACCATGGCGTGGTATACCCAGTTCATGAAGGGGTTCTTCGAAAAGGCGCGCAGCGAGAC CATGGACCGAACCACGCTGCGGATTTCCCTTGGGTTGATGCGGGCGCAGCTTGCCCGGCATGCTGCGCAGATCGGCGTCA ACCGCCGCTGGTTCAGCAAGGGGTCGTCGCGTGAGCTTGCCAAGGCCAAACGTTTCTTGTCACGCGATATGCAAACGGCG CTGGAGGGCAACGGCAGCCAATTCATGCAGTTCCGGCTGGGCGTGGCGGTCGCGATCATCGAAAGCTATGCGCTCTATCA GACGCTCTCCAAGCAAGACAAGGATGCGCGCGATTACACCAAGATGGCGGGCGCCTTCGTGCTCGTGGCCAGCGCCATCG CGGATACGGCAGCGTCCAGCATCAACATGGTCATGGTAATGGGCAAATACCGTGCGACCGATGTCGGCAAGGCCGCTCAA TTCCGTCTGGGCGGTTTTTCGTTCTGGGGGGGGATGCTGGCGTCGGTGGGGGCGTTGTTTGGAGCGATTGATGATTTTAG CGAGGTGGTAAAAAGGTATAGTAATCAAAATTATACCTTGGCATCCTTTTATTTTGTGAGGTTTGTTGCAAACGTTGGCA TTGCTGTACTTGGTACGGCAATAACTTTGGCATCGTCGGTAGCTTATCTGGCTCGGGTATCACAGCAGGGCAAAACCGCC CTCGCACGTAGACTGGCCTCTATCTTGGCCCCATTGGCTAGATCATTGGCGTCGGCTGCCATTCGCGGCGTGCTGATGGC CAGTTTTGCCGTAGTCTCCTGGGCCGGTATCATTCTGACGATCGGGTTCTGGATTTTCGGCGATGATGCGCTCGAGGCGT GGTGCAAGCGCTGTGTCTTTACCACCGAGAGCGTGCCCGATCATTACGCCGACTATGCGGAAGAAGTCGGCGCCTTCCAC CAGGCTTTACAGGACGTGACCTGA
Upstream 100 bases:
>100_bases CCGGAATTCGCGCGGGCAGTGGAACTCTCCCTGTCGGGATCGCGCTCTCTGGCGGAACACTTGAAGGCAACGGGCTCACA AAGCATCAGCGAGGCACATC
Downstream 100 bases:
>100_bases TGTATTTCGTTGAGTGGCTGATGCGCCGCACCCTGACGGCGAGCAAGAAGGATATCACCGGCTTCGAGGGTGATATGAAG CAGTTCGAGAAGGCGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 887; Mature: 886
Protein sequence:
>887_residues MGSVLDPLSIGQSVGDRLSALPQTDDDGTTVDCKKSINILPLRYSAIYAEEEDRAALGSVPEYRGDPVSDIGLSQAKYTA RFLREGYLYVLVNRLGTYRWEHCYYVSADALLSRINPYEPTKESGGISYFAINDVEDVSEGYMLFLPDPLSVRMLERLKS NAHLRESLQRFAIAELAHSCSGESVIPPTMLQSEVAEFVGYQDESVGHLLQKQTFPSLTDPFDEDAQPADLQRYWSRFES LQRALEGLQGFAVVLADPIGITQELNNHRNDALEPLKDWMEKEDEDGLSNEQRFYTSELIRNLRQNYVEGRINSLAQRDV RRFRLQVGNRYLPHVRAVGEAEIGGNRQPTARDYELAEEYEERQAEILESSSQRITAERGEEFRQEYDSQYAPLLDQNAR KAFDDSMAKQSQIQEVLMAHRVSDHLAWLQSTSFLDALDYYDSRDPIWGWAYSIQVVQATVGMEGTEEGAALLDQWWRDM NMNDRSNLAWAVYCLNQYDIRRAGQQDIDAFRAKETRVADTDDDSWMGPEPQNILQGFKHLTTAFNTANAALEGESPSWF RTNRLGVTMAWYTQFMKGFFEKARSETMDRTTLRISLGLMRAQLARHAAQIGVNRRWFSKGSSRELAKAKRFLSRDMQTA LEGNGSQFMQFRLGVAVAIIESYALYQTLSKQDKDARDYTKMAGAFVLVASAIADTAASSINMVMVMGKYRATDVGKAAQ FRLGGFSFWGGMLASVGALFGAIDDFSEVVKRYSNQNYTLASFYFVRFVANVGIAVLGTAITLASSVAYLARVSQQGKTA LARRLASILAPLARSLASAAIRGVLMASFAVVSWAGIILTIGFWIFGDDALEAWCKRCVFTTESVPDHYADYAEEVGAFH QALQDVT
Sequences:
>Translated_887_residues MGSVLDPLSIGQSVGDRLSALPQTDDDGTTVDCKKSINILPLRYSAIYAEEEDRAALGSVPEYRGDPVSDIGLSQAKYTA RFLREGYLYVLVNRLGTYRWEHCYYVSADALLSRINPYEPTKESGGISYFAINDVEDVSEGYMLFLPDPLSVRMLERLKS NAHLRESLQRFAIAELAHSCSGESVIPPTMLQSEVAEFVGYQDESVGHLLQKQTFPSLTDPFDEDAQPADLQRYWSRFES LQRALEGLQGFAVVLADPIGITQELNNHRNDALEPLKDWMEKEDEDGLSNEQRFYTSELIRNLRQNYVEGRINSLAQRDV RRFRLQVGNRYLPHVRAVGEAEIGGNRQPTARDYELAEEYEERQAEILESSSQRITAERGEEFRQEYDSQYAPLLDQNAR KAFDDSMAKQSQIQEVLMAHRVSDHLAWLQSTSFLDALDYYDSRDPIWGWAYSIQVVQATVGMEGTEEGAALLDQWWRDM NMNDRSNLAWAVYCLNQYDIRRAGQQDIDAFRAKETRVADTDDDSWMGPEPQNILQGFKHLTTAFNTANAALEGESPSWF RTNRLGVTMAWYTQFMKGFFEKARSETMDRTTLRISLGLMRAQLARHAAQIGVNRRWFSKGSSRELAKAKRFLSRDMQTA LEGNGSQFMQFRLGVAVAIIESYALYQTLSKQDKDARDYTKMAGAFVLVASAIADTAASSINMVMVMGKYRATDVGKAAQ FRLGGFSFWGGMLASVGALFGAIDDFSEVVKRYSNQNYTLASFYFVRFVANVGIAVLGTAITLASSVAYLARVSQQGKTA LARRLASILAPLARSLASAAIRGVLMASFAVVSWAGIILTIGFWIFGDDALEAWCKRCVFTTESVPDHYADYAEEVGAFH QALQDVT >Mature_886_residues GSVLDPLSIGQSVGDRLSALPQTDDDGTTVDCKKSINILPLRYSAIYAEEEDRAALGSVPEYRGDPVSDIGLSQAKYTAR FLREGYLYVLVNRLGTYRWEHCYYVSADALLSRINPYEPTKESGGISYFAINDVEDVSEGYMLFLPDPLSVRMLERLKSN AHLRESLQRFAIAELAHSCSGESVIPPTMLQSEVAEFVGYQDESVGHLLQKQTFPSLTDPFDEDAQPADLQRYWSRFESL QRALEGLQGFAVVLADPIGITQELNNHRNDALEPLKDWMEKEDEDGLSNEQRFYTSELIRNLRQNYVEGRINSLAQRDVR RFRLQVGNRYLPHVRAVGEAEIGGNRQPTARDYELAEEYEERQAEILESSSQRITAERGEEFRQEYDSQYAPLLDQNARK AFDDSMAKQSQIQEVLMAHRVSDHLAWLQSTSFLDALDYYDSRDPIWGWAYSIQVVQATVGMEGTEEGAALLDQWWRDMN MNDRSNLAWAVYCLNQYDIRRAGQQDIDAFRAKETRVADTDDDSWMGPEPQNILQGFKHLTTAFNTANAALEGESPSWFR TNRLGVTMAWYTQFMKGFFEKARSETMDRTTLRISLGLMRAQLARHAAQIGVNRRWFSKGSSRELAKAKRFLSRDMQTAL EGNGSQFMQFRLGVAVAIIESYALYQTLSKQDKDARDYTKMAGAFVLVASAIADTAASSINMVMVMGKYRATDVGKAAQF RLGGFSFWGGMLASVGALFGAIDDFSEVVKRYSNQNYTLASFYFVRFVANVGIAVLGTAITLASSVAYLARVSQQGKTAL ARRLASILAPLARSLASAAIRGVLMASFAVVSWAGIILTIGFWIFGDDALEAWCKRCVFTTESVPDHYADYAEEVGAFHQ ALQDVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99622; Mature: 99491
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVLDPLSIGQSVGDRLSALPQTDDDGTTVDCKKSINILPLRYSAIYAEEEDRAALGSV CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEHHHEECCCCCHHHHCCC PEYRGDPVSDIGLSQAKYTARFLREGYLYVLVNRLGTYRWEHCYYVSADALLSRINPYEP CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEECCEEEEEHHHHHHHCCCCCC TKESGGISYFAINDVEDVSEGYMLFLPDPLSVRMLERLKSNAHLRESLQRFAIAELAHSC CCCCCCEEEEEECCHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC SGESVIPPTMLQSEVAEFVGYQDESVGHLLQKQTFPSLTDPFDEDAQPADLQRYWSRFES CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LQRALEGLQGFAVVLADPIGITQELNNHRNDALEPLKDWMEKEDEDGLSNEQRFYTSELI HHHHHHHHCCEEHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RNLRQNYVEGRINSLAQRDVRRFRLQVGNRYLPHVRAVGEAEIGGNRQPTARDYELAEEY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHH EERQAEILESSSQRITAERGEEFRQEYDSQYAPLLDQNARKAFDDSMAKQSQIQEVLMAH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RVSDHLAWLQSTSFLDALDYYDSRDPIWGWAYSIQVVQATVGMEGTEEGAALLDQWWRDM HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC NMNDRSNLAWAVYCLNQYDIRRAGQQDIDAFRAKETRVADTDDDSWMGPEPQNILQGFKH CCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH LTTAFNTANAALEGESPSWFRTNRLGVTMAWYTQFMKGFFEKARSETMDRTTLRISLGLM HHHHHHHCCCEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQLARHAAQIGVNRRWFSKGSSRELAKAKRFLSRDMQTALEGNGSQFMQFRLGVAVAII HHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ESYALYQTLSKQDKDARDYTKMAGAFVLVASAIADTAASSINMVMVMGKYRATDVGKAAQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHH FRLGGFSFWGGMLASVGALFGAIDDFSEVVKRYSNQNYTLASFYFVRFVANVGIAVLGTA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH ITLASSVAYLARVSQQGKTALARRLASILAPLARSLASAAIRGVLMASFAVVSWAGIILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFWIFGDDALEAWCKRCVFTTESVPDHYADYAEEVGAFHQALQDVT HHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GSVLDPLSIGQSVGDRLSALPQTDDDGTTVDCKKSINILPLRYSAIYAEEEDRAALGSV CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEHHHEECCCCCHHHHCCC PEYRGDPVSDIGLSQAKYTARFLREGYLYVLVNRLGTYRWEHCYYVSADALLSRINPYEP CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEECCEEEEEHHHHHHHCCCCCC TKESGGISYFAINDVEDVSEGYMLFLPDPLSVRMLERLKSNAHLRESLQRFAIAELAHSC CCCCCCEEEEEECCHHHHCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC SGESVIPPTMLQSEVAEFVGYQDESVGHLLQKQTFPSLTDPFDEDAQPADLQRYWSRFES CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH LQRALEGLQGFAVVLADPIGITQELNNHRNDALEPLKDWMEKEDEDGLSNEQRFYTSELI HHHHHHHHCCEEHHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RNLRQNYVEGRINSLAQRDVRRFRLQVGNRYLPHVRAVGEAEIGGNRQPTARDYELAEEY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHH EERQAEILESSSQRITAERGEEFRQEYDSQYAPLLDQNARKAFDDSMAKQSQIQEVLMAH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RVSDHLAWLQSTSFLDALDYYDSRDPIWGWAYSIQVVQATVGMEGTEEGAALLDQWWRDM HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC NMNDRSNLAWAVYCLNQYDIRRAGQQDIDAFRAKETRVADTDDDSWMGPEPQNILQGFKH CCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH LTTAFNTANAALEGESPSWFRTNRLGVTMAWYTQFMKGFFEKARSETMDRTTLRISLGLM HHHHHHHCCCEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQLARHAAQIGVNRRWFSKGSSRELAKAKRFLSRDMQTALEGNGSQFMQFRLGVAVAII HHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ESYALYQTLSKQDKDARDYTKMAGAFVLVASAIADTAASSINMVMVMGKYRATDVGKAAQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHH FRLGGFSFWGGMLASVGALFGAIDDFSEVVKRYSNQNYTLASFYFVRFVANVGIAVLGTA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH ITLASSVAYLARVSQQGKTALARRLASILAPLARSLASAAIRGVLMASFAVVSWAGIILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFWIFGDDALEAWCKRCVFTTESVPDHYADYAEEVGAFHQALQDVT HHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA