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The map label for this gene is yaeJ [C]

Identifier: 92112308

GI number: 92112308

Start: 197265

End: 197678

Strand: Direct

Name: yaeJ [C]

Synonym: Csal_0173

Alternate gene names: 92112308

Gene position: 197265-197678 (Clockwise)

Preceding gene: 92112307

Following gene: 92112310

Centisome position: 5.34

GC content: 61.84

Gene sequence:

>414_bases
ATGCTGACGATCTCCAATACGGTGGCGCTCGCCGATTGGGAAATCGACATTAGTCAGATTCGGGCGCAGGGTGCCGGCGG
CCAGAACGTCAACAAGGTCGCCTCGGCGGTACACCTGCGTTTCGACATCCTGCGTTCGTCCTTGCCGCCGTTCTACAAGG
AGCGGCTGATGGCGCTTTCCGATCAGCGCATCAGCAAGGATGGCGTGGTCATCATCAAGGCGCAGCGCCACCGCACGCTG
GAAGCCAACAAGGAAGAGGCGCTCGCGCGTCTCAAGGCCCTGATCCAGGGCGCGGTGCAGCAACGCAAGGTACGTCGTCC
CACCCAGCCTTCCAAGGGCGCGAAGCGTCGCCGCGTCGACAAGAAAACTCGCAAGGGAAAGACCAAGGCCTTGCGCGGCA
AGGTGGAGGTATAA

Upstream 100 bases:

>100_bases
CGCCAGGACGACGACGCTGCCTGATATCACGCGATTGCCCGGGGGAGGCGCCGGTGGTGTAGCCTGACGGGACTCATTCA
TCCGTCACGAGGGCCACGCC

Downstream 100 bases:

>100_bases
GGCCGCGCCGCGCATGTGCGTGGCGGTTGTCTCGTGAACGGCCGGCCCTCAGGCCGGCTGCTTGGGAAGGGCAAGCAGTT
CGCGCTCCAGGGCGAAGATA

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLTISNTVALADWEIDISQIRAQGAGGQNVNKVASAVHLRFDILRSSLPPFYKERLMALSDQRISKDGVVIIKAQRHRTL
EANKEEALARLKALIQGAVQQRKVRRPTQPSKGAKRRRVDKKTRKGKTKALRGKVEV

Sequences:

>Translated_137_residues
MLTISNTVALADWEIDISQIRAQGAGGQNVNKVASAVHLRFDILRSSLPPFYKERLMALSDQRISKDGVVIIKAQRHRTL
EANKEEALARLKALIQGAVQQRKVRRPTQPSKGAKRRRVDKKTRKGKTKALRGKVEV
>Mature_137_residues
MLTISNTVALADWEIDISQIRAQGAGGQNVNKVASAVHLRFDILRSSLPPFYKERLMALSDQRISKDGVVIIKAQRHRTL
EANKEEALARLKALIQGAVQQRKVRRPTQPSKGAKRRRVDKKTRKGKTKALRGKVEV

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=135, Percent_Identity=55.5555555555556, Blast_Score=157, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15376; Mature: 15376

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTISNTVALADWEIDISQIRAQGAGGQNVNKVASAVHLRFDILRSSLPPFYKERLMALS
CEEECCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DQRISKDGVVIIKAQRHRTLEANKEEALARLKALIQGAVQQRKVRRPTQPSKGAKRRRVD
HCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
KKTRKGKTKALRGKVEV
HHHHCCCHHHHCCCCCC
>Mature Secondary Structure
MLTISNTVALADWEIDISQIRAQGAGGQNVNKVASAVHLRFDILRSSLPPFYKERLMALS
CEEECCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DQRISKDGVVIIKAQRHRTLEANKEEALARLKALIQGAVQQRKVRRPTQPSKGAKRRRVD
HCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
KKTRKGKTKALRGKVEV
HHHHCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]