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The map label for this gene is bedA [H]

Identifier: 92112271

GI number: 92112271

Start: 157230

End: 158429

Strand: Direct

Name: bedA [H]

Synonym: Csal_0136

Alternate gene names: 92112271

Gene position: 157230-158429 (Clockwise)

Preceding gene: 92112270

Following gene: 92112272

Centisome position: 4.25

GC content: 67.17

Gene sequence:

>1200_bases
ATGTCGGAACCCATTTCTCGCATCGTGGTGATCGGCGGCGGCCAGGCCGCCGGGTGGGCCTGCAAGACGCTCCGCGAGGA
AGGCTTTGGCGGTACGCTCACCGTGGTGGCCGATGAGCCTCATGATTTCTACGAGCGACCGCCGCTGTCCAAGGCCGTGC
TCTCCGGTGATGCCTCCTTGCCCCGCCTTTTTCCGGAAGATGACGTGGCCGGCTGGTCGATCGACTGGCGACGCCCGAAG
CGGGCAACGCACATCGATAGTCACGCCCATACGGTCACCCTCGACGATGGCGAACGGCTCGCCTACGACCGGCTCTTGAT
CGCGACGGGAGCCACGCCTCGCCTGCCTGATCCACGCTGGGCCGAGCACGACGACGTCCTCACCCTGCGCTCCTGGGACG
ATGCTCAGCGACTCAAGCGGCGCCTGGCCGATGCCCGACGGCTGGCGGTCGTCGGTGGTGGCTGGATCGGCCTCGAGGTG
GCGGCCACCGCGCGCCGGCTGGGGCTCGAGGTCGAGGTCTTCGAACGGCAAGCGGCGCTCTGCGCCCGGAGCGTCGGACC
GGAGGTATCCGAGGCCTTGGCCGCGTTGCATCTCCGGGAAAACGTGGCGCTGCGGCTGAATTGCGGCGATGTGGCGATCA
CGCCCCTGGCCAGTGGCGTACGCATCACGAGTGACGTGCATGACACGCAAGCCGACCTGGCGGTAGTCGGGACGGGAGTC
GATTTCGGTCTCGAGCTGGCCCGCGAGGCCGGTGTCGCGACGCAGCAAGGCATTGTCGTCGACCAGGCCGGCGCGACCTC
GGTGGCGGATATCTTCGCCGCCGGTGACGTGACCCAGCATCCCGTGCTGGGGCAGTGCCTGCAGTCCTGGGGGTATGCCC
AGAACCAGGCGATAGCGGCGGCGCGCGGTCTGCTGGGCAAGGCGGCGGCATACGACGATCCCGCCTGGCTCTGGTCCGAC
CAATACGGCACCAACATTCAGATCCTGGGGACGCCTTGCCCCGACACGCGCTGCGTCGTGCGTCAGGAGCCTCTGGGCAC
GAGCTTCTTCTATCTGGATGCCGCCGATCGCTTATGCCAGGCCGTGACCTTCGATCAACCTCGGCATATCAAGCTGGCCA
AGCGTTGGCTTGCGGCAAGACGCGTGCTCGATCCCGACATGCTGGGTGATCCCACCAGCAACCTCATGCGGCTTCGGTAG

Upstream 100 bases:

>100_bases
AACTCGAGCACTCGCTGGCCTCCTTTACCGAATGGGCCGTCGAAGGCGGTATCGATATCGAAACGCGCCGCCAGAAGGCG
CCCCACGAAAGGGCCTGAAC

Downstream 100 bases:

>100_bases
CGAATAACCGACGTCAAACCTCCATAACAATGACAATGGTAATGTCCCATGACGACAACGACTGCATCTTCCCAATCATC
GGCACCGGCAGCCGAGACAC

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSEPISRIVVIGGGQAAGWACKTLREEGFGGTLTVVADEPHDFYERPPLSKAVLSGDASLPRLFPEDDVAGWSIDWRRPK
RATHIDSHAHTVTLDDGERLAYDRLLIATGATPRLPDPRWAEHDDVLTLRSWDDAQRLKRRLADARRLAVVGGGWIGLEV
AATARRLGLEVEVFERQAALCARSVGPEVSEALAALHLRENVALRLNCGDVAITPLASGVRITSDVHDTQADLAVVGTGV
DFGLELAREAGVATQQGIVVDQAGATSVADIFAAGDVTQHPVLGQCLQSWGYAQNQAIAAARGLLGKAAAYDDPAWLWSD
QYGTNIQILGTPCPDTRCVVRQEPLGTSFFYLDAADRLCQAVTFDQPRHIKLAKRWLAARRVLDPDMLGDPTSNLMRLR

Sequences:

>Translated_399_residues
MSEPISRIVVIGGGQAAGWACKTLREEGFGGTLTVVADEPHDFYERPPLSKAVLSGDASLPRLFPEDDVAGWSIDWRRPK
RATHIDSHAHTVTLDDGERLAYDRLLIATGATPRLPDPRWAEHDDVLTLRSWDDAQRLKRRLADARRLAVVGGGWIGLEV
AATARRLGLEVEVFERQAALCARSVGPEVSEALAALHLRENVALRLNCGDVAITPLASGVRITSDVHDTQADLAVVGTGV
DFGLELAREAGVATQQGIVVDQAGATSVADIFAAGDVTQHPVLGQCLQSWGYAQNQAIAAARGLLGKAAAYDDPAWLWSD
QYGTNIQILGTPCPDTRCVVRQEPLGTSFFYLDAADRLCQAVTFDQPRHIKLAKRWLAARRVLDPDMLGDPTSNLMRLR
>Mature_398_residues
SEPISRIVVIGGGQAAGWACKTLREEGFGGTLTVVADEPHDFYERPPLSKAVLSGDASLPRLFPEDDVAGWSIDWRRPKR
ATHIDSHAHTVTLDDGERLAYDRLLIATGATPRLPDPRWAEHDDVLTLRSWDDAQRLKRRLADARRLAVVGGGWIGLEVA
ATARRLGLEVEVFERQAALCARSVGPEVSEALAALHLRENVALRLNCGDVAITPLASGVRITSDVHDTQADLAVVGTGVD
FGLELAREAGVATQQGIVVDQAGATSVADIFAAGDVTQHPVLGQCLQSWGYAQNQAIAAARGLLGKAAAYDDPAWLWSDQ
YGTNIQILGTPCPDTRCVVRQEPLGTSFFYLDAADRLCQAVTFDQPRHIKLAKRWLAARRVLDPDMLGDPTSNLMRLR

Specific function: Part of the electron transfer component of benzene 1,2- dioxygenase, transfers electrons from ferredoxin to NADH [H]

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase ferredoxin reductase family [H]

Homologues:

Organism=Homo sapiens, GI21389617, Length=337, Percent_Identity=28.486646884273, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI65787454, Length=337, Percent_Identity=28.486646884273, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI226437568, Length=337, Percent_Identity=28.486646884273, Blast_Score=126, Evalue=4e-29,
Organism=Escherichia coli, GI1788892, Length=408, Percent_Identity=35.7843137254902, Blast_Score=165, Evalue=5e-42,
Organism=Escherichia coli, GI1789065, Length=313, Percent_Identity=31.3099041533546, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1789765, Length=366, Percent_Identity=25.6830601092896, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585130, Length=326, Percent_Identity=22.3926380368098, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24639257, Length=333, Percent_Identity=23.7237237237237, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281359715, Length=333, Percent_Identity=23.7237237237237, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281359713, Length=333, Percent_Identity=23.7237237237237, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639250, Length=333, Percent_Identity=23.7237237237237, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI18543267, Length=333, Percent_Identity=23.7237237237237, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639252, Length=333, Percent_Identity=23.7237237237237, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR004099
- InterPro:   IPR001327 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 43258; Mature: 43127

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPISRIVVIGGGQAAGWACKTLREEGFGGTLTVVADEPHDFYERPPLSKAVLSGDASL
CCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCHHHHCCCCCC
PRLFPEDDVAGWSIDWRRPKRATHIDSHAHTVTLDDGERLAYDRLLIATGATPRLPDPRW
CCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCC
AEHDDVLTLRSWDDAQRLKRRLADARRLAVVGGGWIGLEVAATARRLGLEVEVFERQAAL
CCCCCEEEEECCCHHHHHHHHHHHHHEEEEEECCEEEEHHHHHHHHHCCEEEHHHHHHHH
CARSVGPEVSEALAALHLRENVALRLNCGDVAITPLASGVRITSDVHDTQADLAVVGTGV
HHHHCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCEEEECCCCCCCCCEEEEECCC
DFGLELAREAGVATQQGIVVDQAGATSVADIFAAGDVTQHPVLGQCLQSWGYAQNQAIAA
HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHH
ARGLLGKAAAYDDPAWLWSDQYGTNIQILGTPCPDTRCVVRQEPLGTSFFYLDAADRLCQ
HHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECHHHHHHH
AVTFDQPRHIKLAKRWLAARRVLDPDMLGDPTSNLMRLR
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEECC
>Mature Secondary Structure 
SEPISRIVVIGGGQAAGWACKTLREEGFGGTLTVVADEPHDFYERPPLSKAVLSGDASL
CCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCHHHHCCCCCC
PRLFPEDDVAGWSIDWRRPKRATHIDSHAHTVTLDDGERLAYDRLLIATGATPRLPDPRW
CCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCC
AEHDDVLTLRSWDDAQRLKRRLADARRLAVVGGGWIGLEVAATARRLGLEVEVFERQAAL
CCCCCEEEEECCCHHHHHHHHHHHHHEEEEEECCEEEEHHHHHHHHHCCEEEHHHHHHHH
CARSVGPEVSEALAALHLRENVALRLNCGDVAITPLASGVRITSDVHDTQADLAVVGTGV
HHHHCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCEEEECCCCCCCCCEEEEECCC
DFGLELAREAGVATQQGIVVDQAGATSVADIFAAGDVTQHPVLGQCLQSWGYAQNQAIAA
HHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHH
ARGLLGKAAAYDDPAWLWSDQYGTNIQILGTPCPDTRCVVRQEPLGTSFFYLDAADRLCQ
HHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECHHHHHHH
AVTFDQPRHIKLAKRWLAARRVLDPDMLGDPTSNLMRLR
HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]