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The map label for this gene is ndoA [H]

Identifier: 92112265

GI number: 92112265

Start: 152801

End: 153121

Strand: Direct

Name: ndoA [H]

Synonym: Csal_0130

Alternate gene names: 92112265

Gene position: 152801-153121 (Clockwise)

Preceding gene: 92112264

Following gene: 92112266

Centisome position: 4.13

GC content: 57.01

Gene sequence:

>321_bases
ATGAAGTGGACGACCGTCTGTAAGCGAGACCAAGTACAGGAAGACTTCCCTTTCTCGGCCAAGGTCGACGACAAGGAAGT
CGGGATATACCTGCTGGATGGCGAGTATTTCGCCCTCGAGGATGTATGCCCGCATGCATATGCCTTGCTGTCGCAAGGGT
TTGTCGAGGACGGCATGGTCGAGTGCCCCTTGCATGAGGCCGCCTTCGACATTCGTACAGGCAAATGTCTGCGCGAGCCC
GGGGAGCGTGATCTCGATGTGTATCCGGTTCGGATCGTCGATGACCACGTCCAGCTGAACATGAACGAACAGGGGGCCTG
A

Upstream 100 bases:

>100_bases
CAGCGAAGTTTGCGTCGGCCTAATCTCCTTTCCATGGATCATATAGAAAACGATGTTTCATATATGAGACGCCGTGAGCT
GCATGACAAGGACAAACACC

Downstream 100 bases:

>100_bases
CCGATGGCCGAACGACAGTACAACGACCAACTGAACCAGTGGGCCAACATCATTCCTTCCAGCGAAGCGGGGCAGGGGCA
CATCGAGCGCCCCGGCGGTT

Product: Rieske (2Fe-2S) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKWTTVCKRDQVQEDFPFSAKVDDKEVGIYLLDGEYFALEDVCPHAYALLSQGFVEDGMVECPLHEAAFDIRTGKCLREP
GERDLDVYPVRIVDDHVQLNMNEQGA

Sequences:

>Translated_106_residues
MKWTTVCKRDQVQEDFPFSAKVDDKEVGIYLLDGEYFALEDVCPHAYALLSQGFVEDGMVECPLHEAAFDIRTGKCLREP
GERDLDVYPVRIVDDHVQLNMNEQGA
>Mature_106_residues
MKWTTVCKRDQVQEDFPFSAKVDDKEVGIYLLDGEYFALEDVCPHAYALLSQGFVEDGMVECPLHEAAFDIRTGKCLREP
GERDLDVYPVRIVDDHVQLNMNEQGA

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=78, Percent_Identity=37.1794871794872, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12082; Mature: 12082

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWTTVCKRDQVQEDFPFSAKVDDKEVGIYLLDGEYFALEDVCPHAYALLSQGFVEDGMV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCEE
ECPLHEAAFDIRTGKCLREPGERDLDVYPVRIVDDHVQLNMNEQGA
ECCCCHHHCCCCCCHHHCCCCCCCCEEEEEEEECCEEEEECCCCCC
>Mature Secondary Structure
MKWTTVCKRDQVQEDFPFSAKVDDKEVGIYLLDGEYFALEDVCPHAYALLSQGFVEDGMV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCEE
ECPLHEAAFDIRTGKCLREPGERDLDVYPVRIVDDHVQLNMNEQGA
ECCCCHHHCCCCCCHHHCCCCCCCCEEEEEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA