Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is pntB [H]
Identifier: 91790375
GI number: 91790375
Start: 4806053
End: 4807477
Strand: Reverse
Name: pntB [H]
Synonym: Bpro_4544
Alternate gene names: 91790375
Gene position: 4807477-4806053 (Counterclockwise)
Preceding gene: 91790376
Following gene: 91790374
Centisome position: 92.45
GC content: 63.58
Gene sequence:
>1425_bases ATGAGCATGAACCTCGTCACGCTGCTGTACCTGGTGGCCTCTGTTTGCTTCATTCAGGCGCTCAAGGGCCTGTCGCACCC CACCAGCTCCATCCGCGGCAACCTGTTCGGCATGGTCGGCATGGCCATTGCCATGCTGACCACGGCCGCGCTGATCGTCG AAATCTCGGGCGGCAAGGCCCTCGGCATGGCTTATGTACTGGTGGGCCTGGTGGTCGGCGGGGGCTATGGCGCCTGGCGC GCCAAGACGGTCGAAATGACCAAGATGCCCGAGCTGGTCGCCTTCTTCCACAGCATGATTGGCTTGGCCGCGGTCTTCAT CGCCGTGGCCGCCGTCGCCGAGCCCTACGCCTTTGGCATCGCGGCCAAAGGCAGCCCCATCCCCACCGGCAACCGGCTGG AGCTGTTCCTCGGCGCGGCCATTGGCGCCATCACCTTCAGCGGCTCGGTGATCGCCTTCGGCAAACTCTCGGGCACTTAC AAGTTCCGCCTGTTCCAGGGCGCGCCGGTGCAGTTTGCCGGCCAGCACAAGCTCAACCTGATCCTGGGCCTGCTGACCAT CGGCCTGGGGCTGGTGTTCATGTTCACGGGCAGCTGGCCAGCCTTTTTCGCGATGCTGGCGCTGAGCTTCGTGATGGGCG TGCTCATCATCATCCCGATCGGTGGCGCCGACATGCCGGTGGTGGTGTCCATGCTCAACAGCTATTCGGGCTGGGCCGCG GCCGGCATCGGTTTTTCCCTGAACAACTCGATGCTGATCATTGCTGGCTCGCTGGTCGGCTCGTCGGGTGCGATTCTCTC GTACATCATGTGCAAGGCGATGAACCGCTCCTTCTTCAACGTGATCCTGGGCGGCTTCGGCGGCGAGGCGGGCACTGCCG TGGCCGGCACGAAAGAGCAGCGCCCGGTCAAGTCCGGCTCGGCCGATGACGCCGCCTACATCCTGGGCAACGCCGAAACC GTGATCATCGTTCCCGGCTACGGCCTGGCGGTGGCGCGCGCGCAGCATGCGGTGAACGAGCTGGCCGAAAAACTCATTCA CCGCGGCGTCAACGTGAAGTACGCCATCCACCCGGTGGCCGGCCGCATGCCGGGCCACATGAACGTGCTGCTGGCCGAGG CCGAGGTGCCCTACGACCAGGTGTTCGAGATGGAAGACATCAACGGTGAGTTTGGGCAGGCCGACGTGGCGATCATTCTG GGTGCCAACGACGTGGTGAATCCGGCCGCGCTCACCAAGGGCAGCCCGATCTACGGCATGCCGATTCTCGAGGCGTACCG GGCCAAGACCGTCATCGTCAACAAACGCTCCATGGCGGCCGGCTACGCGGGCCTGGACAACGAGTTGTTCTACATGGACA AAACCATGATGGTGTTTGGCGATGCCAAAAAGGTGATTGAGGACATGGGCAAGGCGATCGAGTAA
Upstream 100 bases:
>100_bases CCGTCAACATCTTCGGCGGCTTTCTGGTGACGCGCCGGATGCTGGAGATGTTCCGCAAGAAAGAAAAGAAAGTGGCCGCG CCCGCTGAAGGAGCCGCCAA
Downstream 100 bases:
>100_bases ACAGGCGAGTAAACGGAAACGGGCGAGTAAAAGCGGGCTGTGGCCGCACCGGGGGCCATCCATGCCGGCTCCCGGACAGC GAGGGTTCCTCCTTCCCACC
Product: NAD(P) transhydrogenase subunit beta
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSMNLVTLLYLVASVCFIQALKGLSHPTSSIRGNLFGMVGMAIAMLTTAALIVEISGGKALGMAYVLVGLVVGGGYGAWR AKTVEMTKMPELVAFFHSMIGLAAVFIAVAAVAEPYAFGIAAKGSPIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGTY KFRLFQGAPVQFAGQHKLNLILGLLTIGLGLVFMFTGSWPAFFAMLALSFVMGVLIIIPIGGADMPVVVSMLNSYSGWAA AGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEAGTAVAGTKEQRPVKSGSADDAAYILGNAET VIIVPGYGLAVARAQHAVNELAEKLIHRGVNVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVAIIL GANDVVNPAALTKGSPIYGMPILEAYRAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMGKAIE
Sequences:
>Translated_474_residues MSMNLVTLLYLVASVCFIQALKGLSHPTSSIRGNLFGMVGMAIAMLTTAALIVEISGGKALGMAYVLVGLVVGGGYGAWR AKTVEMTKMPELVAFFHSMIGLAAVFIAVAAVAEPYAFGIAAKGSPIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGTY KFRLFQGAPVQFAGQHKLNLILGLLTIGLGLVFMFTGSWPAFFAMLALSFVMGVLIIIPIGGADMPVVVSMLNSYSGWAA AGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEAGTAVAGTKEQRPVKSGSADDAAYILGNAET VIIVPGYGLAVARAQHAVNELAEKLIHRGVNVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVAIIL GANDVVNPAALTKGSPIYGMPILEAYRAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMGKAIE >Mature_473_residues SMNLVTLLYLVASVCFIQALKGLSHPTSSIRGNLFGMVGMAIAMLTTAALIVEISGGKALGMAYVLVGLVVGGGYGAWRA KTVEMTKMPELVAFFHSMIGLAAVFIAVAAVAEPYAFGIAAKGSPIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGTYK FRLFQGAPVQFAGQHKLNLILGLLTIGLGLVFMFTGSWPAFFAMLALSFVMGVLIIIPIGGADMPVVVSMLNSYSGWAAA GIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEAGTAVAGTKEQRPVKSGSADDAAYILGNAETV IIVPGYGLAVARAQHAVNELAEKLIHRGVNVKYAIHPVAGRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVAIILG ANDVVNPAALTKGSPIYGMPILEAYRAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMGKAIE
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=480, Percent_Identity=44.1666666666667, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI122939153, Length=480, Percent_Identity=44.1666666666667, Blast_Score=354, Evalue=1e-97, Organism=Escherichia coli, GI1787886, Length=479, Percent_Identity=50.7306889352818, Blast_Score=429, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17550456, Length=479, Percent_Identity=43.4237995824635, Blast_Score=335, Evalue=3e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 49595; Mature: 49464
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMNLVTLLYLVASVCFIQALKGLSHPTSSIRGNLFGMVGMAIAMLTTAALIVEISGGKA CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCH LGMAYVLVGLVVGGGYGAWRAKTVEMTKMPELVAFFHSMIGLAAVFIAVAAVAEPYAFGI HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE AAKGSPIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGTYKFRLFQGAPVQFAGQHKLNL ECCCCCCCCCCCEEEEEHHHHHHEEECCCEEEEEECCCEEEEEEEECCCCEECCCHHHHH ILGLLTIGLGLVFMFTGSWPAFFAMLALSFVMGVLIIIPIGGADMPVVVSMLNSYSGWAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE AGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEAGTAVAGTKEQ ECCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEECCCCCC RPVKSGSADDAAYILGNAETVIIVPGYGLAVARAQHAVNELAEKLIHRGVNVKYAIHPVA CCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC GRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVAIILGANDVVNPAALTKGSPIYGM CCCCCCCEEEEEECCCCHHHHEEHHCCCCCCCCCCEEEEECCCCCCCCHHCCCCCCCCCC PILEAYRAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMGKAIE HHHHHHCCEEEEEECCHHHCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure SMNLVTLLYLVASVCFIQALKGLSHPTSSIRGNLFGMVGMAIAMLTTAALIVEISGGKA CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCH LGMAYVLVGLVVGGGYGAWRAKTVEMTKMPELVAFFHSMIGLAAVFIAVAAVAEPYAFGI HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE AAKGSPIPTGNRLELFLGAAIGAITFSGSVIAFGKLSGTYKFRLFQGAPVQFAGQHKLNL ECCCCCCCCCCCEEEEEHHHHHHEEECCCEEEEEECCCEEEEEEEECCCCEECCCHHHHH ILGLLTIGLGLVFMFTGSWPAFFAMLALSFVMGVLIIIPIGGADMPVVVSMLNSYSGWAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE AGIGFSLNNSMLIIAGSLVGSSGAILSYIMCKAMNRSFFNVILGGFGGEAGTAVAGTKEQ ECCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEECCCCCC RPVKSGSADDAAYILGNAETVIIVPGYGLAVARAQHAVNELAEKLIHRGVNVKYAIHPVA CCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC GRMPGHMNVLLAEAEVPYDQVFEMEDINGEFGQADVAIILGANDVVNPAALTKGSPIYGM CCCCCCCEEEEEECCCCHHHHEEHHCCCCCCCCCCEEEEECCCCCCCCHHCCCCCCCCCC PILEAYRAKTVIVNKRSMAAGYAGLDNELFYMDKTMMVFGDAKKVIEDMGKAIE HHHHHHCCEEEEEECCHHHCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]