Click here to switch to the map view.

The map label for this gene is yiaO [C]

Identifier: 91790331

GI number: 91790331

Start: 4754419

End: 4755429

Strand: Reverse

Name: yiaO [C]

Synonym: Bpro_4499

Alternate gene names: 91790331

Gene position: 4755429-4754419 (Counterclockwise)

Preceding gene: 91790332

Following gene: 91790330

Centisome position: 91.45

GC content: 59.84

Gene sequence:

>1011_bases
ATGAAACGTCTGATGATCAAGACCGTGGTGGCCGTTGCCGCACTGACCGCTTTCGGCATGGCCAGCGCACAGGACATCAA
GGAGCGCAACATCAAGTTCGCCACCCAGAACCCCAAGGGTCATCCGATCGTGACGGGCATGGAAAAATTCGCCGAGATCG
TTGCCGCCAAATCCGGCGGCAAGATCAAGGTCAACCTGTTCCCCGGCGGTGTGCTTGGTGGCGATGCACCCAACGTCTCG
GCGCTGCAGGGCGGCACCATTGAAATGGTGTCCATGAACTCGGGCATTCTGGCCAGCCAGGTCAAGGAATTTGCCATTTT
TGACTTCCCCTTCCTGTTTGCCAACAGCAAGGAAGCCGATGCCGTGGTTGATGGCCCGTTCGGCAGGAAAATGCACGACA
AGCTGCGGGAAAAGGGCATTGTGGGCCTGACCTATTGGGAACTGGGCTTTCGCAATATGACCAACGGCAAGCGCCCCCTC
AACAAGGTGGAAGACTTCGCCGGCCTGAAGATCCGCGTGATCCCCAACCCGATCAATCTGGACTGGGTCAAGGCGCTGGA
TGCCAACCCCACGCCCATGGCCTTCCCCGAAGTCTATGGCGCTCTGGAAGCCAAGGCGCTGGACGGACAGGAAAACCCGT
TCACCGTGATCCAGGCCAACAAACTCAATGAGGTCCAGAAGTACCTGACGGTGACCAACCACGTCTACAACCCGCAGTCC
GTCATCATCAGCAAGAAGTTCTGGGACACGCTGAGCGGCGTCGAGAAAAAACTGCTGGGCGACGCTGCCGTGGAAGCCGG
CAAATACCAGCGCCAGGTCGCGCGGGAAGCCTCGGGCACTGCGCTGGCGGCACTGAAGAAGGCCGGCATGCAGGTCAACG
AGCTGCCCGCGCCCGAAATGGACAAGCTGCGCGACAAGATGCGCCCGGTGATTGCCAAGTACGCCGTATCCGTCGGCCAG
GAGACCGTCACGGAAATGCAAGGCGAGCTGGCCAAGGCCCGCAGCAAGTAA

Upstream 100 bases:

>100_bases
GCCCGGCGCCAGTCCTGATTTCCATGGTGTGGGGCGTGTCTGGTACGCCAAGCTCCGCACCTCAATCGTTTGCGTACTGG
ATTTTTACTAGGAGACAAGC

Downstream 100 bases:

>100_bases
TTTTGATTTTCAACAAGGACTGAAACGAAACTCTGCCATCCCGGCCTTCGCCGGGATGGCAACCCATACCGAGTGCGATC
TGCGATCTGAATTCCTGCTG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKRLMIKTVVAVAALTAFGMASAQDIKERNIKFATQNPKGHPIVTGMEKFAEIVAAKSGGKIKVNLFPGGVLGGDAPNVS
ALQGGTIEMVSMNSGILASQVKEFAIFDFPFLFANSKEADAVVDGPFGRKMHDKLREKGIVGLTYWELGFRNMTNGKRPL
NKVEDFAGLKIRVIPNPINLDWVKALDANPTPMAFPEVYGALEAKALDGQENPFTVIQANKLNEVQKYLTVTNHVYNPQS
VIISKKFWDTLSGVEKKLLGDAAVEAGKYQRQVAREASGTALAALKKAGMQVNELPAPEMDKLRDKMRPVIAKYAVSVGQ
ETVTEMQGELAKARSK

Sequences:

>Translated_336_residues
MKRLMIKTVVAVAALTAFGMASAQDIKERNIKFATQNPKGHPIVTGMEKFAEIVAAKSGGKIKVNLFPGGVLGGDAPNVS
ALQGGTIEMVSMNSGILASQVKEFAIFDFPFLFANSKEADAVVDGPFGRKMHDKLREKGIVGLTYWELGFRNMTNGKRPL
NKVEDFAGLKIRVIPNPINLDWVKALDANPTPMAFPEVYGALEAKALDGQENPFTVIQANKLNEVQKYLTVTNHVYNPQS
VIISKKFWDTLSGVEKKLLGDAAVEAGKYQRQVAREASGTALAALKKAGMQVNELPAPEMDKLRDKMRPVIAKYAVSVGQ
ETVTEMQGELAKARSK
>Mature_336_residues
MKRLMIKTVVAVAALTAFGMASAQDIKERNIKFATQNPKGHPIVTGMEKFAEIVAAKSGGKIKVNLFPGGVLGGDAPNVS
ALQGGTIEMVSMNSGILASQVKEFAIFDFPFLFANSKEADAVVDGPFGRKMHDKLREKGIVGLTYWELGFRNMTNGKRPL
NKVEDFAGLKIRVIPNPINLDWVKALDANPTPMAFPEVYGALEAKALDGQENPFTVIQANKLNEVQKYLTVTNHVYNPQS
VIISKKFWDTLSGVEKKLLGDAAVEAGKYQRQVAREASGTALAALKKAGMQVNELPAPEMDKLRDKMRPVIAKYAVSVGQ
ETVTEMQGELAKARSK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=292, Percent_Identity=34.2465753424658, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36536; Mature: 36536

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLMIKTVVAVAALTAFGMASAQDIKERNIKFATQNPKGHPIVTGMEKFAEIVAAKSGG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHCCCCC
KIKVNLFPGGVLGGDAPNVSALQGGTIEMVSMNSGILASQVKEFAIFDFPFLFANSKEAD
EEEEEEECCCCCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHCCCHHEECCCCCCC
AVVDGPFGRKMHDKLREKGIVGLTYWELGFRNMTNGKRPLNKVEDFAGLKIRVIPNPINL
EEECCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCC
DWVKALDANPTPMAFPEVYGALEAKALDGQENPFTVIQANKLNEVQKYLTVTNHVYNPQS
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHH
VIISKKFWDTLSGVEKKLLGDAAVEAGKYQRQVAREASGTALAALKKAGMQVNELPAPEM
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCH
DKLRDKMRPVIAKYAVSVGQETVTEMQGELAKARSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLMIKTVVAVAALTAFGMASAQDIKERNIKFATQNPKGHPIVTGMEKFAEIVAAKSGG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHCCCCC
KIKVNLFPGGVLGGDAPNVSALQGGTIEMVSMNSGILASQVKEFAIFDFPFLFANSKEAD
EEEEEEECCCCCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHCCCHHEECCCCCCC
AVVDGPFGRKMHDKLREKGIVGLTYWELGFRNMTNGKRPLNKVEDFAGLKIRVIPNPINL
EEECCCCCHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCC
DWVKALDANPTPMAFPEVYGALEAKALDGQENPFTVIQANKLNEVQKYLTVTNHVYNPQS
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHH
VIISKKFWDTLSGVEKKLLGDAAVEAGKYQRQVAREASGTALAALKKAGMQVNELPAPEM
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCH
DKLRDKMRPVIAKYAVSVGQETVTEMQGELAKARSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]