Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is cyaB [H]
Identifier: 91790298
GI number: 91790298
Start: 4720041
End: 4721726
Strand: Reverse
Name: cyaB [H]
Synonym: Bpro_4465
Alternate gene names: 91790298
Gene position: 4721726-4720041 (Counterclockwise)
Preceding gene: 91790299
Following gene: 91790297
Centisome position: 90.8
GC content: 63.46
Gene sequence:
>1686_bases ATGGATGACGTAGCGAGGCCGGGAGCGGGCGAGCCGCTCCATTCCAGCGCCGGTGCCATGCGTGCACCCGTGCAGCGCCG TTCCCGCGTCCTTATCGTTGAAGACACGGCTGATATCCGCTACTTCCTCGAAACCCTGCTGAAGGATCAATACGAGGTCG CCGCAGCTTCTGCTGGCGAGACCGGCCTGCAGATGGCGACGGGCGAACCCCGCCCCGAGATCATCCTGCTGGACGTCATG ATGCCGGACATGGACGGCTATGAAGTCATGCGCCAGCTGGCCAAGGACCCGCGCACGGCGGAGATTCCGGTCATTTTCCT CACGGCCCTTGGCAGCGTGGCGGATGAGCAAAAAGGGCTGGATCTGGGTGCCACCGACTACATCACCAAGCCGATCAGTC CGCCCATTCTGCTGGCCCGCGTTAGGCTTCATCTGGAGCGCAGCGCCAATGCCAGGCGCCTGAAGGATTTGTCAGAGCAG CTGTCGCGCTACCTGGCGCCGCAGGTCTACCAGTCGCTGTTCGATGGTTCCCGCCAGGCTGAAATTCAGACGCAGCGCAA GCGGCTGACGGTGTTTTTTTCCGATATCAAGAACTTCACCGCCTCGACGGCGCAATGGCAGCCCGAAGAAGTCACGCTGC TGCTGAACAGCTATTTCGCCGAGATGTCGCAGATCGCTGCGGAATACGGCGCAACGCTGGACAAATTCATCGGCGACGCC ATCGTCATATTTTTTGGCGACCCGCACAGCCTGGGGCCGCGCCGGGATGCCTTGCAGTGCGTGAGGATGGCGGTGGCGAT GCAAAGGCGCATGCAGGATTTGCAGCGGCGCTGGCGCAGCATGGACATCAGCAAGACGTTCGAGATACGTATCGGTATCA ATTCCGGCTTCTGCGACGTGGGCAATTTCGGCAGTGCGCTGCGCATGGAATACACCATCATCGGGCGTGAGGTGAATCTC GCGGCCAGGCTTGAGCAGGCCGCCGAGCCCGGCGAGATACTGATCTCCAGTGAAACCTATGCCCTGGTGCGGGGCGAAAT CCTGGCTGATGCGCGGGAGCCCTTGCTGGCCAAGGGTTTTGCCGAGCCCATTGCCATCTATGCCGTTGATAAAGCCGCGA TGGAAGGGGACGGCGACGCCAGCATCATCCGGTGTGACAGGCCGGGACTGCGCATGGACATCGACCTGGGCCGGCTGACA GGCGCAGAGCGGACGCAAGCAGCCGTCCAGATTCGCAAGGCGCTTGTGAGCCTGGAAGCGTTGCCCGATGCCGCCGCTGT GCCCGAACCCGCGGCAGCGGATGCGGCCGATGTTTCATTGCCCGAACACATGGCGGGGTTGGACCTGGCGTTGGGACTGT CTCGCGCGATGGGGCTCAACCCGCTGTACGTCTCGATGCTCCGCCGCTTCCAGCAAAGCCACCAGGAAACGATCGCGCGC ATCCGCCAGGCGCTGGAAGACGGCGAGCTGAAAACGGCAGAGCTGCTGAGCCACTCGTTGCGCGGGGTGGCAGGGCAGAT TGGTGCAACGCGCGTGCCGCATGATGCCGAAGCGCTTGAGCAGGCCCTGGGGGGCAGCCAGCCGCGTGAAGCCATTGATG GGCGGCTGGCAGCGCTGGAGGTGTCTCTTGGGGAATTGATTGCCGCACTGCATGCCGGGCTGCCGCCCGAAGCCGCCGCG CCCTGA
Upstream 100 bases:
>100_bases CGGTGATTGACGCGATGCGGACTGCGCTGGCGAGCTGAAGCCGCGTGCCGGGCCGCCATCGCGAAGCCGAGGCGCCTGGT TTTAATGGAAGAGCCGGACC
Downstream 100 bases:
>100_bases TCATTCCGACGCCGGGGTCGGGGTAATATGCAGACGCTGGTACGCCAGAACCTGCGGGCGTGCTTTGGGGAGTCGCTTGC GAATGGGCGGGCCCTCAAGC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MDDVARPGAGEPLHSSAGAMRAPVQRRSRVLIVEDTADIRYFLETLLKDQYEVAAASAGETGLQMATGEPRPEIILLDVM MPDMDGYEVMRQLAKDPRTAEIPVIFLTALGSVADEQKGLDLGATDYITKPISPPILLARVRLHLERSANARRLKDLSEQ LSRYLAPQVYQSLFDGSRQAEIQTQRKRLTVFFSDIKNFTASTAQWQPEEVTLLLNSYFAEMSQIAAEYGATLDKFIGDA IVIFFGDPHSLGPRRDALQCVRMAVAMQRRMQDLQRRWRSMDISKTFEIRIGINSGFCDVGNFGSALRMEYTIIGREVNL AARLEQAAEPGEILISSETYALVRGEILADAREPLLAKGFAEPIAIYAVDKAAMEGDGDASIIRCDRPGLRMDIDLGRLT GAERTQAAVQIRKALVSLEALPDAAAVPEPAAADAADVSLPEHMAGLDLALGLSRAMGLNPLYVSMLRRFQQSHQETIAR IRQALEDGELKTAELLSHSLRGVAGQIGATRVPHDAEALEQALGGSQPREAIDGRLAALEVSLGELIAALHAGLPPEAAA P
Sequences:
>Translated_561_residues MDDVARPGAGEPLHSSAGAMRAPVQRRSRVLIVEDTADIRYFLETLLKDQYEVAAASAGETGLQMATGEPRPEIILLDVM MPDMDGYEVMRQLAKDPRTAEIPVIFLTALGSVADEQKGLDLGATDYITKPISPPILLARVRLHLERSANARRLKDLSEQ LSRYLAPQVYQSLFDGSRQAEIQTQRKRLTVFFSDIKNFTASTAQWQPEEVTLLLNSYFAEMSQIAAEYGATLDKFIGDA IVIFFGDPHSLGPRRDALQCVRMAVAMQRRMQDLQRRWRSMDISKTFEIRIGINSGFCDVGNFGSALRMEYTIIGREVNL AARLEQAAEPGEILISSETYALVRGEILADAREPLLAKGFAEPIAIYAVDKAAMEGDGDASIIRCDRPGLRMDIDLGRLT GAERTQAAVQIRKALVSLEALPDAAAVPEPAAADAADVSLPEHMAGLDLALGLSRAMGLNPLYVSMLRRFQQSHQETIAR IRQALEDGELKTAELLSHSLRGVAGQIGATRVPHDAEALEQALGGSQPREAIDGRLAALEVSLGELIAALHAGLPPEAAA P >Mature_561_residues MDDVARPGAGEPLHSSAGAMRAPVQRRSRVLIVEDTADIRYFLETLLKDQYEVAAASAGETGLQMATGEPRPEIILLDVM MPDMDGYEVMRQLAKDPRTAEIPVIFLTALGSVADEQKGLDLGATDYITKPISPPILLARVRLHLERSANARRLKDLSEQ LSRYLAPQVYQSLFDGSRQAEIQTQRKRLTVFFSDIKNFTASTAQWQPEEVTLLLNSYFAEMSQIAAEYGATLDKFIGDA IVIFFGDPHSLGPRRDALQCVRMAVAMQRRMQDLQRRWRSMDISKTFEIRIGINSGFCDVGNFGSALRMEYTIIGREVNL AARLEQAAEPGEILISSETYALVRGEILADAREPLLAKGFAEPIAIYAVDKAAMEGDGDASIIRCDRPGLRMDIDLGRLT GAERTQAAVQIRKALVSLEALPDAAAVPEPAAADAADVSLPEHMAGLDLALGLSRAMGLNPLYVSMLRRFQQSHQETIAR IRQALEDGELKTAELLSHSLRGVAGQIGATRVPHDAEALEQALGGSQPREAIDGRLAALEVSLGELIAALHAGLPPEAAA P
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Homo sapiens, GI24497587, Length=211, Percent_Identity=31.7535545023697, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI167830411, Length=156, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI4580422, Length=152, Percent_Identity=32.8947368421053, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=38.3333333333333, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1786784, Length=125, Percent_Identity=40, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082012, Length=121, Percent_Identity=40.495867768595, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789809, Length=128, Percent_Identity=35.9375, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786911, Length=123, Percent_Identity=39.0243902439024, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=27.6018099547511, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788550, Length=137, Percent_Identity=31.3868613138686, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1790860, Length=125, Percent_Identity=40, Blast_Score=69, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17534653, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71989805, Length=195, Percent_Identity=29.2307692307692, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17534655, Length=204, Percent_Identity=28.921568627451, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71989822, Length=195, Percent_Identity=29.2307692307692, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17534657, Length=184, Percent_Identity=29.8913043478261, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17534651, Length=231, Percent_Identity=26.8398268398268, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193207841, Length=240, Percent_Identity=28.3333333333333, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17534649, Length=205, Percent_Identity=26.3414634146341, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17534659, Length=210, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI212645052, Length=175, Percent_Identity=30.8571428571429, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24585694, Length=242, Percent_Identity=26.4462809917355, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI161076872, Length=156, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574512, Length=156, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221330470, Length=155, Percent_Identity=30.9677419354839, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330468, Length=155, Percent_Identity=30.9677419354839, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI161084260, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281366320, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 61101; Mature: 61101
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDVARPGAGEPLHSSAGAMRAPVQRRSRVLIVEDTADIRYFLETLLKDQYEVAAASAGE CCCCCCCCCCCCCCCCCCHHHCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC TGLQMATGEPRPEIILLDVMMPDMDGYEVMRQLAKDPRTAEIPVIFLTALGSVADEQKGL CCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCC DLGATDYITKPISPPILLARVRLHLERSANARRLKDLSEQLSRYLAPQVYQSLFDGSRQA CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EIQTQRKRLTVFFSDIKNFTASTAQWQPEEVTLLLNSYFAEMSQIAAEYGATLDKFIGDA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCE IVIFFGDPHSLGPRRDALQCVRMAVAMQRRMQDLQRRWRSMDISKTFEIRIGINSGFCDV EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC GNFGSALRMEYTIIGREVNLAARLEQAAEPGEILISSETYALVRGEILADAREPLLAKGF CCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHHCHHHHHCC AEPIAIYAVDKAAMEGDGDASIIRCDRPGLRMDIDLGRLTGAERTQAAVQIRKALVSLEA CCCEEEEEEHHHHHCCCCCCEEEEECCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHH LPDAAAVPEPAAADAADVSLPEHMAGLDLALGLSRAMGLNPLYVSMLRRFQQSHQETIAR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IRQALEDGELKTAELLSHSLRGVAGQIGATRVPHDAEALEQALGGSQPREAIDGRLAALE HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCHHEEH VSLGELIAALHAGLPPEAAAP HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDDVARPGAGEPLHSSAGAMRAPVQRRSRVLIVEDTADIRYFLETLLKDQYEVAAASAGE CCCCCCCCCCCCCCCCCCHHHCCHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC TGLQMATGEPRPEIILLDVMMPDMDGYEVMRQLAKDPRTAEIPVIFLTALGSVADEQKGL CCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCC DLGATDYITKPISPPILLARVRLHLERSANARRLKDLSEQLSRYLAPQVYQSLFDGSRQA CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EIQTQRKRLTVFFSDIKNFTASTAQWQPEEVTLLLNSYFAEMSQIAAEYGATLDKFIGDA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCE IVIFFGDPHSLGPRRDALQCVRMAVAMQRRMQDLQRRWRSMDISKTFEIRIGINSGFCDV EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC GNFGSALRMEYTIIGREVNLAARLEQAAEPGEILISSETYALVRGEILADAREPLLAKGF CCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCEEHHHHHHHHHHHCHHHHHCC AEPIAIYAVDKAAMEGDGDASIIRCDRPGLRMDIDLGRLTGAERTQAAVQIRKALVSLEA CCCEEEEEEHHHHHCCCCCCEEEEECCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHH LPDAAAVPEPAAADAADVSLPEHMAGLDLALGLSRAMGLNPLYVSMLRRFQQSHQETIAR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IRQALEDGELKTAELLSHSLRGVAGQIGATRVPHDAEALEQALGGSQPREAIDGRLAALE HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCHHEEH VSLGELIAALHAGLPPEAAAP HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]