The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yxjH [H]

Identifier: 91789244

GI number: 91789244

Start: 3581730

End: 3582863

Strand: Direct

Name: yxjH [H]

Synonym: Bpro_3388

Alternate gene names: 91789244

Gene position: 3581730-3582863 (Clockwise)

Preceding gene: 91789233

Following gene: 91789248

Centisome position: 68.88

GC content: 63.14

Gene sequence:

>1134_bases
ATGAGCAACACGAGCAACACCGCCCCTCACCTGCCCGCGCGCTATGACCACGTGGGCAGTTTTTTGCGCCCGAAATATTT
GCTGGAAGCCCGCGAACAAAAAGCCCAGGGCCAGATCACGCCCGAGCAGTTGCGCCAGGTGGAAGACCGGGCCATCACCG
AGATTGTGAGATTCCAGGAAGACGTGGGCCTGAAAAGCATCACCGACGGCGAGTTTCGCCGCACCTACTTTCACATTGAC
TTTCTGGAGCAGATCGGCGGCGTGAAAACCGACATCCCGGTGACCGTGATCCGGCCCGACGGCTCGCAGGAGCTGGCCCC
GCCGGTGATGCGCGTGATTGACAAGGTGCGCCACGTCAAGGACATCCAGCTGGCCGACTTCCAGTACCTCAAGAGCCAGG
TATCGGCAGGCAATACGCCCAAGGTGACCATTCCGTCACCGACCATGCTGCACTTTCGCGGCGGCCGGGCCGGCATCAGC
AAGGAGCACTACCCCGAGCTGGACCCGCAGTTCTACCAGGACGTGGCCAACGCCTACGGTGACGAGCTGCGCTCGCTGGC
CGCCGCCGGCTGCACCTATGTGCAGATGGACGACACCAACCTGGCCTACCTGTGCGACGAAAAAATGCGCGAAGCCGCAC
GCCAGCGCGGCGACGACCCCAATGAGCTGCCGCACCGCTACGCCAAATTCATCAACCTCGTTGTCGCGCAAAAGCCGCCC
GGCATGCTGCTGGCCATGCACCTGTGCCGTGGCAACTTCAAGAGCACGCACGCGGCATCGGGCAATTACGAGCCGGTGGC
CGAGGCGCTGCTGAAAGAAATGAACCTCGACGCCTACTTCATGGAGTACGACGACGCGCGCAGCGGCGACTTCAAACCGC
TGCGTTACCTGCCCAAGGGAAAGACCGTGGTGCTGGGACTCGTCACCACCAAGTTTGGCTCGCTGGAAGACAAGGACGAC
CTGAAACGCCGCATTGAAGCCGCGGCCCGCTACGCGCCGCTGGAGCAGCTGGCGCTGTCACCGCAGTGCGGCTTCAGCAG
CACCGTGCACGGCAATGACATTGCCGTTGAGGCGCAGCGCGCCAAGCTGCGGCTGGTGGTGGAAACGGCGCAGGAGGTTT
GGGGAACGGCCTGA

Upstream 100 bases:

>100_bases
TAGCCATTTCTAGGTGTTTTCACCAGTTTTTGTATTCATTGAAAGAGTTGATCAATGCCTTAACATGCAAGTTAATCACC
GCCTCAACCAAGGACTCCGT

Downstream 100 bases:

>100_bases
AGCATCACCACCGCAGGCCATGACACGAGCCGGCGCGGTCGGTGGCCAGCGCGTGGCGCCGCGGCTTCACGACACAAAAG
CCGACGGCACGGGGGCTTCG

Product: methionine synthase, vitamin-B12 independent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSNTSNTAPHLPARYDHVGSFLRPKYLLEAREQKAQGQITPEQLRQVEDRAITEIVRFQEDVGLKSITDGEFRRTYFHID
FLEQIGGVKTDIPVTVIRPDGSQELAPPVMRVIDKVRHVKDIQLADFQYLKSQVSAGNTPKVTIPSPTMLHFRGGRAGIS
KEHYPELDPQFYQDVANAYGDELRSLAAAGCTYVQMDDTNLAYLCDEKMREAARQRGDDPNELPHRYAKFINLVVAQKPP
GMLLAMHLCRGNFKSTHAASGNYEPVAEALLKEMNLDAYFMEYDDARSGDFKPLRYLPKGKTVVLGLVTTKFGSLEDKDD
LKRRIEAAARYAPLEQLALSPQCGFSSTVHGNDIAVEAQRAKLRLVVETAQEVWGTA

Sequences:

>Translated_377_residues
MSNTSNTAPHLPARYDHVGSFLRPKYLLEAREQKAQGQITPEQLRQVEDRAITEIVRFQEDVGLKSITDGEFRRTYFHID
FLEQIGGVKTDIPVTVIRPDGSQELAPPVMRVIDKVRHVKDIQLADFQYLKSQVSAGNTPKVTIPSPTMLHFRGGRAGIS
KEHYPELDPQFYQDVANAYGDELRSLAAAGCTYVQMDDTNLAYLCDEKMREAARQRGDDPNELPHRYAKFINLVVAQKPP
GMLLAMHLCRGNFKSTHAASGNYEPVAEALLKEMNLDAYFMEYDDARSGDFKPLRYLPKGKTVVLGLVTTKFGSLEDKDD
LKRRIEAAARYAPLEQLALSPQCGFSSTVHGNDIAVEAQRAKLRLVVETAQEVWGTA
>Mature_376_residues
SNTSNTAPHLPARYDHVGSFLRPKYLLEAREQKAQGQITPEQLRQVEDRAITEIVRFQEDVGLKSITDGEFRRTYFHIDF
LEQIGGVKTDIPVTVIRPDGSQELAPPVMRVIDKVRHVKDIQLADFQYLKSQVSAGNTPKVTIPSPTMLHFRGGRAGISK
EHYPELDPQFYQDVANAYGDELRSLAAAGCTYVQMDDTNLAYLCDEKMREAARQRGDDPNELPHRYAKFINLVVAQKPPG
MLLAMHLCRGNFKSTHAASGNYEPVAEALLKEMNLDAYFMEYDDARSGDFKPLRYLPKGKTVVLGLVTTKFGSLEDKDDL
KRRIEAAARYAPLEQLALSPQCGFSSTVHGNDIAVEAQRAKLRLVVETAQEVWGTA

Specific function: Unknown

COG id: COG0620

COG function: function code E; Methionine synthase II (cobalamin-independent)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yxjG [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002629 [H]

Pfam domain/function: PF01717 Meth_synt_2 [H]

EC number: NA

Molecular weight: Translated: 42270; Mature: 42139

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTSNTAPHLPARYDHVGSFLRPKYLLEAREQKAQGQITPEQLRQVEDRAITEIVRFQE
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DVGLKSITDGEFRRTYFHIDFLEQIGGVKTDIPVTVIRPDGSQELAPPVMRVIDKVRHVK
HCCCCCCCCCCHHHHEEEEEHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
DIQLADFQYLKSQVSAGNTPKVTIPSPTMLHFRGGRAGISKEHYPELDPQFYQDVANAYG
CCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
DELRSLAAAGCTYVQMDDTNLAYLCDEKMREAARQRGDDPNELPHRYAKFINLVVAQKPP
HHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
GMLLAMHLCRGNFKSTHAASGNYEPVAEALLKEMNLDAYFMEYDDARSGDFKPLRYLPKG
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCC
KTVVLGLVTTKFGSLEDKDDLKRRIEAAARYAPLEQLALSPQCGFSSTVHGNDIAVEAQR
CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEHH
AKLRLVVETAQEVWGTA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNTSNTAPHLPARYDHVGSFLRPKYLLEAREQKAQGQITPEQLRQVEDRAITEIVRFQE
CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DVGLKSITDGEFRRTYFHIDFLEQIGGVKTDIPVTVIRPDGSQELAPPVMRVIDKVRHVK
HCCCCCCCCCCHHHHEEEEEHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
DIQLADFQYLKSQVSAGNTPKVTIPSPTMLHFRGGRAGISKEHYPELDPQFYQDVANAYG
CCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
DELRSLAAAGCTYVQMDDTNLAYLCDEKMREAARQRGDDPNELPHRYAKFINLVVAQKPP
HHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
GMLLAMHLCRGNFKSTHAASGNYEPVAEALLKEMNLDAYFMEYDDARSGDFKPLRYLPKG
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEECCCC
KTVVLGLVTTKFGSLEDKDDLKRRIEAAARYAPLEQLALSPQCGFSSTVHGNDIAVEAQR
CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEHH
AKLRLVVETAQEVWGTA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]