Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789061
Identifier: 91789061
GI number: 91789061
Start: 3385345
End: 3386829
Strand: Reverse
Name: 91789061
Synonym: Bpro_3201
Alternate gene names: NA
Gene position: 3386829-3385345 (Counterclockwise)
Preceding gene: 91789062
Following gene: 91789057
Centisome position: 65.13
GC content: 61.95
Gene sequence:
>1485_bases ATGGAAGACACCATCAATGCGTCGCGTCGCAGTCTTTTGAAGGGCGGCACGGCCGCTGTCGCTATCCCGTTCGTCGCAAC GCTGCAGGCATTTGCAGCACAACATGCCAACGCCGCGCAGCCAGCGCCATCATCGATCGTCGGCCCTTATGGTCCGATTC GCCCAAGCAGGGACCTGAGTACCGGGTTGGAACTGCTTCAGCTTCCCGACGGATTCAGCTATCGCAGCCTGTCATGGACG GGTGATCTGATGGCCAACGGGCAGCCGACGCCACGCGGCCATGACGGTATGGCTGTCGTCGCAGAACGTAACGGGCCAAG GGGCCCCGAAATTGTGCTGATCCGTAATCATGAGCTGGGTGAGGGCGCAGAAGTCATCGGTGCGGGCGCGCAGTATGACC GCAGCCAGGTTCAAGGCGGAACCACCAACATCACTTTCCGGCACGGCACCTCGGAACCGGCCCTCACCGTGCCGAGCCTT GGCGGTACGCTGGTCAACTGTGCCGGTGGCGTCACGCCATGGGGCACCTGGCTGACCTGCGAGGAAACCATCGCGGACCG TACTTCAGTGGGCGGAAGAAAGCACGGCTATGTTTTCGAAGTCACAGCCGACCCCTCACAGACAACAGGCCAGCCGATTG TCGACATGGGTCGTTTCAGCCATGAAGCGGTCGCAGTCGATCCCGCCACCAGCATTGTTTACCTGACGCAGGATGACCGC AACAAGTCGGGCCTGTATCGTTTTATTCCGCGCAATACCAGCATGCAGCCGGGGGCGCTGGCGCAGGGCGGCACTTTGCA GGCGGCGCGTGTCAAAGGCCAGCCAAAAGCGAGCCTGATGGTTGCAACGCTGGGTGACACGTACGAGCTGGAATGGGTCA ACATCCAGTATCCGGACGCCGACCCGCAGGTGTACCTTGTGCCGGATGCGTCCGGCCCCGTTGCCGGCCCCTTTGTGCAG GCCTGGGACCAGGGCGCGCTGCGTATGAGCCGCGGCGAAGGCGCGTGGTATTTCAACCGCAAGATGTATTTCGTCGATAC ATCGACGGGCAGGGATGCCGGCGGCCGGCCAGGACGCGGTGAGGGCGCAGTGTGGGAGCTCGATCTGGCGACGATGCGTT TGAAGGCGGTTTTCGTCTCCGGCAGTGCTATTGCGGGCAACAACCCCGACAACATCACCGTCAGCCCTCGCGGCGGCGTG CTGTTGTGCGAAGACGGTGGTGGCGTGGCGGACGAGTTCGGATTCGGCGATCGTCTGATGGGCCTGATGTCAAACGGCGC AAGCTACATTTTTGCGAAAAACAATATCGTCCTGACGCCGCAGGACATCACCAGCTCCGGCAAGAAAGTTGCGCCGGAAG ACTACCGCGATCGCGAATTCGCAGGAGCCTGTTTCGATGCCAAGGGGCAGACGCTGTTCGTCAACATCCAGACGCCGGGT ATTACCTTTGCGATCTGGGGGCCATGGGCGCGCGGCACGCTGTAA
Upstream 100 bases:
>100_bases CTTTCATTGATAAGAGGTGCCAACGCTGTCACAGCAACTTCATCTGCCTGTGTTTTTATCGAATCGGGAATTGTCCCAAA AACACCCCGGAGAGAAACGT
Downstream 100 bases:
>100_bases AGCTGGTCGATTGGCAAACAAGAAGAAAGGCGACTCGCTGAAATTCAGGAGCCGCCTTTGTGTCTTCGGGTCCTTGTCTT TGAGTCTTTGTCTTGGTGTA
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: WD40 Domain-Containing Protein Beta Propeller; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; Phosphatase; Tat Pathway Signal Sequence Domain Protein; WD40 Domain-Containing Protein; LB Protein; WD40 Domain Protein Beta Propeller; DTDP-Glucose 4 6-Dehydratase; Signal Peptide
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MEDTINASRRSLLKGGTAAVAIPFVATLQAFAAQHANAAQPAPSSIVGPYGPIRPSRDLSTGLELLQLPDGFSYRSLSWT GDLMANGQPTPRGHDGMAVVAERNGPRGPEIVLIRNHELGEGAEVIGAGAQYDRSQVQGGTTNITFRHGTSEPALTVPSL GGTLVNCAGGVTPWGTWLTCEETIADRTSVGGRKHGYVFEVTADPSQTTGQPIVDMGRFSHEAVAVDPATSIVYLTQDDR NKSGLYRFIPRNTSMQPGALAQGGTLQAARVKGQPKASLMVATLGDTYELEWVNIQYPDADPQVYLVPDASGPVAGPFVQ AWDQGALRMSRGEGAWYFNRKMYFVDTSTGRDAGGRPGRGEGAVWELDLATMRLKAVFVSGSAIAGNNPDNITVSPRGGV LLCEDGGGVADEFGFGDRLMGLMSNGASYIFAKNNIVLTPQDITSSGKKVAPEDYRDREFAGACFDAKGQTLFVNIQTPG ITFAIWGPWARGTL
Sequences:
>Translated_494_residues MEDTINASRRSLLKGGTAAVAIPFVATLQAFAAQHANAAQPAPSSIVGPYGPIRPSRDLSTGLELLQLPDGFSYRSLSWT GDLMANGQPTPRGHDGMAVVAERNGPRGPEIVLIRNHELGEGAEVIGAGAQYDRSQVQGGTTNITFRHGTSEPALTVPSL GGTLVNCAGGVTPWGTWLTCEETIADRTSVGGRKHGYVFEVTADPSQTTGQPIVDMGRFSHEAVAVDPATSIVYLTQDDR NKSGLYRFIPRNTSMQPGALAQGGTLQAARVKGQPKASLMVATLGDTYELEWVNIQYPDADPQVYLVPDASGPVAGPFVQ AWDQGALRMSRGEGAWYFNRKMYFVDTSTGRDAGGRPGRGEGAVWELDLATMRLKAVFVSGSAIAGNNPDNITVSPRGGV LLCEDGGGVADEFGFGDRLMGLMSNGASYIFAKNNIVLTPQDITSSGKKVAPEDYRDREFAGACFDAKGQTLFVNIQTPG ITFAIWGPWARGTL >Mature_494_residues MEDTINASRRSLLKGGTAAVAIPFVATLQAFAAQHANAAQPAPSSIVGPYGPIRPSRDLSTGLELLQLPDGFSYRSLSWT GDLMANGQPTPRGHDGMAVVAERNGPRGPEIVLIRNHELGEGAEVIGAGAQYDRSQVQGGTTNITFRHGTSEPALTVPSL GGTLVNCAGGVTPWGTWLTCEETIADRTSVGGRKHGYVFEVTADPSQTTGQPIVDMGRFSHEAVAVDPATSIVYLTQDDR NKSGLYRFIPRNTSMQPGALAQGGTLQAARVKGQPKASLMVATLGDTYELEWVNIQYPDADPQVYLVPDASGPVAGPFVQ AWDQGALRMSRGEGAWYFNRKMYFVDTSTGRDAGGRPGRGEGAVWELDLATMRLKAVFVSGSAIAGNNPDNITVSPRGGV LLCEDGGGVADEFGFGDRLMGLMSNGASYIFAKNNIVLTPQDITSSGKKVAPEDYRDREFAGACFDAKGQTLFVNIQTPG ITFAIWGPWARGTL
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52415; Mature: 52415
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDTINASRRSLLKGGTAAVAIPFVATLQAFAAQHANAAQPAPSSIVGPYGPIRPSRDLS CCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH TGLELLQLPDGFSYRSLSWTGDLMANGQPTPRGHDGMAVVAERNGPRGPEIVLIRNHELG HCHHEEECCCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCC EGAEVIGAGAQYDRSQVQGGTTNITFRHGTSEPALTVPSLGGTLVNCAGGVTPWGTWLTC CCCCEEECCCCCCHHHCCCCCEEEEEEECCCCCCEECCCCCCEEEECCCCCCCCCCEEEE EETIADRTSVGGRKHGYVFEVTADPSQTTGQPIVDMGRFSHEAVAVDPATSIVYLTQDDR HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEECCCCEEEEEEECCC NKSGLYRFIPRNTSMQPGALAQGGTLQAARVKGQPKASLMVATLGDTYELEWVNIQYPDA CCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCC DPQVYLVPDASGPVAGPFVQAWDQGALRMSRGEGAWYFNRKMYFVDTSTGRDAGGRPGRG CCEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCCCCC EGAVWELDLATMRLKAVFVSGSAIAGNNPDNITVSPRGGVLLCEDGGGVADEFGFGDRLM CCCEEEEEHEEEEEEEEEEECCEEECCCCCEEEECCCCCEEEECCCCCCCHHCCCHHHHH GLMSNGASYIFAKNNIVLTPQDITSSGKKVAPEDYRDREFAGACFDAKGQTLFVNIQTPG HHHCCCCEEEEECCCEEECCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCC ITFAIWGPWARGTL EEEEEECCCCCCCC >Mature Secondary Structure MEDTINASRRSLLKGGTAAVAIPFVATLQAFAAQHANAAQPAPSSIVGPYGPIRPSRDLS CCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH TGLELLQLPDGFSYRSLSWTGDLMANGQPTPRGHDGMAVVAERNGPRGPEIVLIRNHELG HCHHEEECCCCCCEEEEEECCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCC EGAEVIGAGAQYDRSQVQGGTTNITFRHGTSEPALTVPSLGGTLVNCAGGVTPWGTWLTC CCCCEEECCCCCCHHHCCCCCEEEEEEECCCCCCEECCCCCCEEEECCCCCCCCCCEEEE EETIADRTSVGGRKHGYVFEVTADPSQTTGQPIVDMGRFSHEAVAVDPATSIVYLTQDDR HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEEEECCCCEEEEEEECCC NKSGLYRFIPRNTSMQPGALAQGGTLQAARVKGQPKASLMVATLGDTYELEWVNIQYPDA CCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCC DPQVYLVPDASGPVAGPFVQAWDQGALRMSRGEGAWYFNRKMYFVDTSTGRDAGGRPGRG CCEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCCCCCC EGAVWELDLATMRLKAVFVSGSAIAGNNPDNITVSPRGGVLLCEDGGGVADEFGFGDRLM CCCEEEEEHEEEEEEEEEEECCEEECCCCCEEEECCCCCEEEECCCCCCCHHCCCHHHHH GLMSNGASYIFAKNNIVLTPQDITSSGKKVAPEDYRDREFAGACFDAKGQTLFVNIQTPG HHHCCCCEEEEECCCEEECCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCC ITFAIWGPWARGTL EEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA