Click here to switch to the map view.

The map label for this gene is yiaM [C]

Identifier: 91788966

GI number: 91788966

Start: 3279280

End: 3279768

Strand: Reverse

Name: yiaM [C]

Synonym: Bpro_3106

Alternate gene names: 91788966

Gene position: 3279768-3279280 (Counterclockwise)

Preceding gene: 91788967

Following gene: 91788965

Centisome position: 63.07

GC content: 59.1

Gene sequence:

>489_bases
ATGTACACAAAATTTTGCGCAATGCTGTCCAAGCTCAGCCTGATCCTGGCCGTGATCGGGCTGCTCGCGGTTGTCCTGTG
CGTCCAGTGGCAGGTCATTGGACGTTACGTCTTCAATGACACGCCGACATGGGCCGAAGCACTGGCCCTGTTGCTGGTGC
TGTTCGTCACTGCATTCGGCGTGGCGGTCGGTGTGCGCGATGCCGGCCACATTGGCCTGGAGTCCCTCGTTGTGCTGCTG
CCCGAGAAGTGGCAGCACCGCATCGAAATCCTGATTCATGTTCTTGTCGGCGGCTTCGGTGCGCTGATGGTCTACGGTGG
CTGGTTATGGATGGCCGCCAAATGGGGCGAGAAAAAACCCATGTTGCCCGTCCCGGATGGCATCGACTACCTGCCGGTGG
TGATTGCCGGCGTGCTGATCGTCCTGTTTTCAATTGAACATGTGATCGCGCTGGTGCGCGGCCAAGTAGTGGAGCCCGCA
TGGAACTGA

Upstream 100 bases:

>100_bases
GCTGCCGGGCAGGCCATGCCTCCTGCCGCAAGGCGGGGGGCGCCTGTCTTCCTGTCCTTTGCGGGGCGGTGGGACGGCCG
GGTCAGAAAAAGATTAATCC

Downstream 100 bases:

>100_bases
CCGTACTCGCCCTGAGCTTCACGCTCTTCCTCGTGATTGGCGTGCCGGTCGCGTTTGCCATCGGCCTGTCGTCGGTCGCC
ACCATCATCGCCGCCGGTCT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: Dicarboxylate Transporter Membrane Protein; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate ABC Transporter Permease Component; TRAP Family C4-Dicarboxylate Transmembrane Transporter; C4-Dicarboxylate Transport Small Permease Component

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MYTKFCAMLSKLSLILAVIGLLAVVLCVQWQVIGRYVFNDTPTWAEALALLLVLFVTAFGVAVGVRDAGHIGLESLVVLL
PEKWQHRIEILIHVLVGGFGALMVYGGWLWMAAKWGEKKPMLPVPDGIDYLPVVIAGVLIVLFSIEHVIALVRGQVVEPA
WN

Sequences:

>Translated_162_residues
MYTKFCAMLSKLSLILAVIGLLAVVLCVQWQVIGRYVFNDTPTWAEALALLLVLFVTAFGVAVGVRDAGHIGLESLVVLL
PEKWQHRIEILIHVLVGGFGALMVYGGWLWMAAKWGEKKPMLPVPDGIDYLPVVIAGVLIVLFSIEHVIALVRGQVVEPA
WN
>Mature_162_residues
MYTKFCAMLSKLSLILAVIGLLAVVLCVQWQVIGRYVFNDTPTWAEALALLLVLFVTAFGVAVGVRDAGHIGLESLVVLL
PEKWQHRIEILIHVLVGGFGALMVYGGWLWMAAKWGEKKPMLPVPDGIDYLPVVIAGVLIVLFSIEHVIALVRGQVVEPA
WN

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17787; Mature: 17787

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTKFCAMLSKLSLILAVIGLLAVVLCVQWQVIGRYVFNDTPTWAEALALLLVLFVTAFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VAVGVRDAGHIGLESLVVLLPEKWQHRIEILIHVLVGGFGALMVYGGWLWMAAKWGEKKP
HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
MLPVPDGIDYLPVVIAGVLIVLFSIEHVIALVRGQVVEPAWN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYTKFCAMLSKLSLILAVIGLLAVVLCVQWQVIGRYVFNDTPTWAEALALLLVLFVTAFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VAVGVRDAGHIGLESLVVLLPEKWQHRIEILIHVLVGGFGALMVYGGWLWMAAKWGEKKP
HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
MLPVPDGIDYLPVVIAGVLIVLFSIEHVIALVRGQVVEPAWN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA