Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788955
Identifier: 91788955
GI number: 91788955
Start: 3264038
End: 3264946
Strand: Reverse
Name: 91788955
Synonym: Bpro_3095
Alternate gene names: NA
Gene position: 3264946-3264038 (Counterclockwise)
Preceding gene: 91788958
Following gene: 91788951
Centisome position: 62.78
GC content: 60.73
Gene sequence:
>909_bases ATGCCCACCACCATGATGATCGGACCGCAGGCCACTTACGTACTCAGCCATCCCGGCGCCTTTGCGTTGCGGGTACTCAA GGGCTTTCGCGCCAACCAGGGCCTGCTGCTGGCCGGGGCCGTGGCTTACTACGCCTTGCTGTCGATTGTTCCGTTGCTGA TCTTGATGGCGATTGCACTGTCGCATGTGATTGACCAATCGGCACTGCTGGAAGCGCTGGGCCGCTACATCGGCTGGCTG GCGCCGGGACAGTCCGAATTCATTGTCGGAGAGCTCGCCAATTTCCTGGCGCATCGTGAAGTCATGGGCTGGCTGTTGCT GGCCACCATGCTGTTTTTCAGTTCACTGGCTTTTACCGTGCTTGAAAATGCGATGTCGGTGGTGTTTTTGCACCGCGTGG TCATTCGGCGGCGCCATTTTCTGGTGTCTGCCGTGCTGCCCTACTGCTACATCCTGTGCCTGGGGCTAGGCCTGCTACTG GTGACGCTGGTCTCGGGCAGCATGCAGGCGCTGGGCGAAAAAAGCGTGGAGTTTCTGGGCTACAGCTGGTCGCTCAGCGG ATTCTCGGGTGTGTTGCTATACCTGCTCGGGCTGGCCGGCGAGATTTTTCTGCTGACATCGGTGTACATGGTGATGCCGG TGGGCAGGCTGTCGCTGCGCCACGCGTTGATTGGCGGGGTCACGGCTGCGCTGCTTTGGGAGGTGACGCGCCATGCCTTG GTCTGGTACTTTGGCACGCTGTCGCAGGTGGGCCTGGTGTATGGCTCACTGACCACCGCCATCGTGGTTTTGCTGAGCCT GGAAATCGCCGCCACGCTGCTGTTGCTGGGCGCGCAGGTCATTTCCGAGTACGAACGCATCGGCACAGTCTTGGAAAACG CCCCGGCCCAGCCCATGCGGATGGACTAG
Upstream 100 bases:
>100_bases CTGCCCCCGAGAGGGGCGTTTTTCCCCAGGGGCGGCCGGTCGGAAAAAATATTGTGCAGCTACCATGCCCGCATGGCAGC CGAAAACGGCAGGAGACCCC
Downstream 100 bases:
>100_bases CCCGCACCCTTGCCTTTGAGGTGGCATCGGTCGCTGCCAAAACAATAGCTGCTTGCGCCCGCGCGGTAAGGGCGCAAGCT ACTTTTGACGACTGGTGCGC
Product: ribonuclease BN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWL APGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLL VTLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMRMD
Sequences:
>Translated_302_residues MPTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWL APGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLL VTLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMRMD >Mature_301_residues PTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWLA PGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLLV TLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHALV WYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMRMD
Specific function: Unknown
COG id: COG1295
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0761 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017039 - InterPro: IPR004664 [H]
Pfam domain/function: PF03631 Ribonuclease_BN [H]
EC number: NA
Molecular weight: Translated: 32762; Mature: 32631
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIAL CCCCEEECCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SHVIDQSALLEALGRYIGWLAPGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLLVTLVSGSMQALGEKSVEFLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC MD CC >Mature Secondary Structure PTTMMIGPQATYVLSHPGAFALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIAL CCCEEECCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SHVIDQSALLEALGRYIGWLAPGQSEFIVGELANFLAHREVMGWLLLATMLFFSSLAFTV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LENAMSVVFLHRVVIRRRHFLVSAVLPYCYILCLGLGLLLVTLVSGSMQALGEKSVEFLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YSWSLSGFSGVLLYLLGLAGEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWYFGTLSQVGLVYGSLTTAIVVLLSLEIAATLLLLGAQVISEYERIGTVLENAPAQPMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC MD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA