Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788936
Identifier: 91788936
GI number: 91788936
Start: 3243512
End: 3244717
Strand: Reverse
Name: 91788936
Synonym: Bpro_3076
Alternate gene names: NA
Gene position: 3244717-3243512 (Counterclockwise)
Preceding gene: 91788937
Following gene: 91788932
Centisome position: 62.4
GC content: 65.92
Gene sequence:
>1206_bases ATGACCCGTGAATTGGCCCGCCTGATCCTGGCGCAGATCTGCCTGCATGCCTGCATGGCCGGCACACGCATGACGGCACC GCTGCTGGCGCTGCGTGAGGGCTATAGTCCTGCGGCGGTCGGCGTGCTGCTGGCACTTTTTGCCGTCACCCAGGTATTCC TCGCCCTGCCCGCAGGGCGCTTTGCCGACCGCCATGGCCTCAGGCGGCCCATGGGCTTCAGTGTGATGGCTGCGGTGGCC GGTGCCAGCGCCGCAGTGGCTTTTCCGGTGTTCCCGGTGCTGTGCCTGGCCGCATTGCTGACCGGCGGCGCTACGGGGGC TGCGGTAATTTCGCTGCAGCGCCACGTGGGGCGGGCGGCATCCGGGCCCTTGCAGCTCAGGCAGGTCTTCAGCTGGCTGT CGATTGGCCCTGCGGTTTCCAATTTCATTGGGCCTTTCACGGCCGGCCTGCTGATTGACCACGCGGGCGCCGTGCCCGGC AGCCTGGAGGGCTATCGGGCAGCTTTTTTCCTGATGGCGGTGTTGCCTATTGCCAGCTGGTTTCTGGTTCGGCGCACCCG TGAACTGCCGCCGGTGATTGCCGCAACGGGCGGTGTGCAACCCAAGGCCTGGGATCTGCTGCGCGAGCCCACGTTTCGCC GGCTCATGCTGGTGAACTGGTTTTTGTCGTCCTGCTGGGATGTACACACCTTTGTCGTGCCGGTGCTGGGCTTTGAAAGA GGCATCAGCGCTTCGGTCATCGGCTCCATCCTCGGTGCCTTTGCCATCGCCGCGGCCGTCATTCGCATGGTGATGCCGCT GCTGGCCGCTCACCTGCGGGAATGGCGGGTGCTGGCCAGCGCCATGCTGGCCACGGCAGCGCTGTTCGCAATTTACCCGC TGATGCGGTCGGCGCTGGGCATGGGTGTCTGCTCGGTGTTGCTGGGTTTTGCCCTTGGCACGGTGCAGCCCATGATCATG AGCATGCTGCACCAGATCACTCCAGAAGCCCGCCACGGCGAGGCGCTGGGGCTGCGGTTGATGGCGATCAACGCCTCCAG TGTGCTGATGCCCATGCTGTTTGGTTTCGCCGGCGCCCTGGTGGGCATTGCGGGCGTTTTCTGGGTCACTGGTGCGCTGG TGGGGGCCGGTTCGCGCACGGCCTGGCTGCTGCAGCACAGCCTGCCACTCCATGACGGGCACCCCGAGCAGAATCGGCCG CAGTGA
Upstream 100 bases:
>100_bases GCGCAACGTCGAGGCCTTGCCGGACGCCGAGTCGGCCCGGCTGATTCCGATGGACAAGGATGTGGATGAGAGTTGAGTCG CGTTTCATGACCCGTCCCGC
Downstream 100 bases:
>100_bases TCTGCGCGAGATCCAAAGGCAATTTCCGCCAGACCCGCGTTGGTGCGCCGGTATCCCCAAGGGTTTAGCCCCGCAGGGCG AGCGTGGAGGCGCCCCGCTT
Product: major facilitator transporter
Products: NA
Alternate protein names: Inner Membrane Efflux Protein; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; MFS Transporter; Multidrug Resistance Protein
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTRELARLILAQICLHACMAGTRMTAPLLALREGYSPAAVGVLLALFAVTQVFLALPAGRFADRHGLRRPMGFSVMAAVA GASAAVAFPVFPVLCLAALLTGGATGAAVISLQRHVGRAASGPLQLRQVFSWLSIGPAVSNFIGPFTAGLLIDHAGAVPG SLEGYRAAFFLMAVLPIASWFLVRRTRELPPVIAATGGVQPKAWDLLREPTFRRLMLVNWFLSSCWDVHTFVVPVLGFER GISASVIGSILGAFAIAAAVIRMVMPLLAAHLREWRVLASAMLATAALFAIYPLMRSALGMGVCSVLLGFALGTVQPMIM SMLHQITPEARHGEALGLRLMAINASSVLMPMLFGFAGALVGIAGVFWVTGALVGAGSRTAWLLQHSLPLHDGHPEQNRP Q
Sequences:
>Translated_401_residues MTRELARLILAQICLHACMAGTRMTAPLLALREGYSPAAVGVLLALFAVTQVFLALPAGRFADRHGLRRPMGFSVMAAVA GASAAVAFPVFPVLCLAALLTGGATGAAVISLQRHVGRAASGPLQLRQVFSWLSIGPAVSNFIGPFTAGLLIDHAGAVPG SLEGYRAAFFLMAVLPIASWFLVRRTRELPPVIAATGGVQPKAWDLLREPTFRRLMLVNWFLSSCWDVHTFVVPVLGFER GISASVIGSILGAFAIAAAVIRMVMPLLAAHLREWRVLASAMLATAALFAIYPLMRSALGMGVCSVLLGFALGTVQPMIM SMLHQITPEARHGEALGLRLMAINASSVLMPMLFGFAGALVGIAGVFWVTGALVGAGSRTAWLLQHSLPLHDGHPEQNRP Q >Mature_400_residues TRELARLILAQICLHACMAGTRMTAPLLALREGYSPAAVGVLLALFAVTQVFLALPAGRFADRHGLRRPMGFSVMAAVAG ASAAVAFPVFPVLCLAALLTGGATGAAVISLQRHVGRAASGPLQLRQVFSWLSIGPAVSNFIGPFTAGLLIDHAGAVPGS LEGYRAAFFLMAVLPIASWFLVRRTRELPPVIAATGGVQPKAWDLLREPTFRRLMLVNWFLSSCWDVHTFVVPVLGFERG ISASVIGSILGAFAIAAAVIRMVMPLLAAHLREWRVLASAMLATAALFAIYPLMRSALGMGVCSVLLGFALGTVQPMIMS MLHQITPEARHGEALGLRLMAINASSVLMPMLFGFAGALVGIAGVFWVTGALVGAGSRTAWLLQHSLPLHDGHPEQNRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42437; Mature: 42306
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRELARLILAQICLHACMAGTRMTAPLLALREGYSPAAVGVLLALFAVTQVFLALPAGR CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH FADRHGLRRPMGFSVMAAVAGASAAVAFPVFPVLCLAALLTGGATGAAVISLQRHVGRAA HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC SGPLQLRQVFSWLSIGPAVSNFIGPFTAGLLIDHAGAVPGSLEGYRAAFFLMAVLPIASW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FLVRRTRELPPVIAATGGVQPKAWDLLREPTFRRLMLVNWFLSSCWDVHTFVVPVLGFER HHHHHHHCCCCCEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GISASVIGSILGAFAIAAAVIRMVMPLLAAHLREWRVLASAMLATAALFAIYPLMRSALG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVCSVLLGFALGTVQPMIMSMLHQITPEARHGEALGLRLMAINASSVLMPMLFGFAGAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCEEEEEECHHHHHHHHHHHHHHHH VGIAGVFWVTGALVGAGSRTAWLLQHSLPLHDGHPEQNRPQ HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TRELARLILAQICLHACMAGTRMTAPLLALREGYSPAAVGVLLALFAVTQVFLALPAGR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH FADRHGLRRPMGFSVMAAVAGASAAVAFPVFPVLCLAALLTGGATGAAVISLQRHVGRAA HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC SGPLQLRQVFSWLSIGPAVSNFIGPFTAGLLIDHAGAVPGSLEGYRAAFFLMAVLPIASW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FLVRRTRELPPVIAATGGVQPKAWDLLREPTFRRLMLVNWFLSSCWDVHTFVVPVLGFER HHHHHHHCCCCCEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GISASVIGSILGAFAIAAAVIRMVMPLLAAHLREWRVLASAMLATAALFAIYPLMRSALG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVCSVLLGFALGTVQPMIMSMLHQITPEARHGEALGLRLMAINASSVLMPMLFGFAGAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCEEEEEECHHHHHHHHHHHHHHHH VGIAGVFWVTGALVGAGSRTAWLLQHSLPLHDGHPEQNRPQ HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA