Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788888
Identifier: 91788888
GI number: 91788888
Start: 3193670
End: 3194023
Strand: Reverse
Name: 91788888
Synonym: Bpro_3028
Alternate gene names: NA
Gene position: 3194023-3193670 (Counterclockwise)
Preceding gene: 91788889
Following gene: 91788884
Centisome position: 61.42
GC content: 52.26
Gene sequence:
>354_bases ATGAATTTCCGGTACTTGATTGCTCCTGTTTTAATAGCTGTCGGTGTGTTAACCATGCTGGCTTCCTGTACCCAGGAGCA GCAAAACAAGATCAGCCGCGACATCCAGAACTGGACCGGCACCAATGGCGTTCTGGAGTTTTATGCGGGCGACAAGCTGA TGCGCCGCTTCATCAAGATTGACAAACTGAGCACCGCCATGGGCACCGATGACGGCAAGGCGCGCTCCTACCGGTTTGGG TATGGCGTGCTGGATGAAAACCTGAACATGGTTGTCGACGCCGGCGAAAAGAAGGTGTATTTCGAGGTCAGCGATTACGG CTCAAACTACATCTTTTTCGAGAATCCCCGCTAA
Upstream 100 bases:
>100_bases CTCAACGTGTCGGTGGCCAGCGGCGTTTGCCTGTACGAAGCGCTGCGCCAGCGCAGCTGACCGGGCTTCTGTCACCCGCA TTTTCCTGGAGATGACTACG
Downstream 100 bases:
>100_bases CCTGACCAGGTGCCCCTCCCGGGGCAGATCAGCTTCGGAGCAAGCTCAGATTAACCCGAACCAGCCGAGTGCAGCGCCTG CGGCCAGCAGCCAGAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNFRYLIAPVLIAVGVLTMLASCTQEQQNKISRDIQNWTGTNGVLEFYAGDKLMRRFIKIDKLSTAMGTDDGKARSYRFG YGVLDENLNMVVDAGEKKVYFEVSDYGSNYIFFENPR
Sequences:
>Translated_117_residues MNFRYLIAPVLIAVGVLTMLASCTQEQQNKISRDIQNWTGTNGVLEFYAGDKLMRRFIKIDKLSTAMGTDDGKARSYRFG YGVLDENLNMVVDAGEKKVYFEVSDYGSNYIFFENPR >Mature_117_residues MNFRYLIAPVLIAVGVLTMLASCTQEQQNKISRDIQNWTGTNGVLEFYAGDKLMRRFIKIDKLSTAMGTDDGKARSYRFG YGVLDENLNMVVDAGEKKVYFEVSDYGSNYIFFENPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13341; Mature: 13341
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRYLIAPVLIAVGVLTMLASCTQEQQNKISRDIQNWTGTNGVLEFYAGDKLMRRFIKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH DKLSTAMGTDDGKARSYRFGYGVLDENLNMVVDAGEKKVYFEVSDYGSNYIFFENPR HHHHHHCCCCCCCCCEEECCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCC >Mature Secondary Structure MNFRYLIAPVLIAVGVLTMLASCTQEQQNKISRDIQNWTGTNGVLEFYAGDKLMRRFIKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH DKLSTAMGTDDGKARSYRFGYGVLDENLNMVVDAGEKKVYFEVSDYGSNYIFFENPR HHHHHHCCCCCCCCCEEECCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA