Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788865
Identifier: 91788865
GI number: 91788865
Start: 3167489
End: 3167773
Strand: Reverse
Name: 91788865
Synonym: Bpro_3005
Alternate gene names: NA
Gene position: 3167773-3167489 (Counterclockwise)
Preceding gene: 91788867
Following gene: 91788861
Centisome position: 60.92
GC content: 63.16
Gene sequence:
>285_bases GTGGCGATGGGTGTCGCGGAAGGGGCTACGGCGGCCTTGGGTTCCGGCACCTGGGGCGGGAGCTTGGGCGACCTGGTATC GGGGCAGCCCGCCAGCAACATGGCGGCCAGGCTCAATGGCAAGAGGTATTTCATGCGGTCTCCAGAGCAGTCGTCTTGCA ATACTGAAATCATAGGCCGCCGTGCGGCGCTATGCCAGTCCGCTGCGTTAATTGGCGGTGGAGGCCTACACGGCAACGTG GGAAAAGGCCTGCCGTGTTGTCTGATGCGGCCACCGATCAGCTAA
Upstream 100 bases:
>100_bases TGTACCCGGCTGGCGCGGCCACCCATGCGCAGGCGCCCAGGCACAGGGTGGCCAGCGCGATCAGGACTTTCATGCGCAGA TCGGGCAGGGGCGCAGCATC
Downstream 100 bases:
>100_bases CACCCATGCGTCGCAGCGCCTCGCTGAGGCATTGTGGCGGTTGCGGGTCATCGACCGTGGTGGCGCATTGCTGCTGCGCC TGGGAGGAGGGCGCGGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MAMGVAEGATAALGSGTWGGSLGDLVSGQPASNMAARLNGKRYFMRSPEQSSCNTEIIGRRAALCQSAALIGGGGLHGNV GKGLPCCLMRPPIS
Sequences:
>Translated_94_residues MAMGVAEGATAALGSGTWGGSLGDLVSGQPASNMAARLNGKRYFMRSPEQSSCNTEIIGRRAALCQSAALIGGGGLHGNV GKGLPCCLMRPPIS >Mature_93_residues AMGVAEGATAALGSGTWGGSLGDLVSGQPASNMAARLNGKRYFMRSPEQSSCNTEIIGRRAALCQSAALIGGGGLHGNVG KGLPCCLMRPPIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9421; Mature: 9290
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00071 GAPDH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMGVAEGATAALGSGTWGGSLGDLVSGQPASNMAARLNGKRYFMRSPEQSSCNTEIIGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHHHHH RAALCQSAALIGGGGLHGNVGKGLPCCLMRPPIS HHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure AMGVAEGATAALGSGTWGGSLGDLVSGQPASNMAARLNGKRYFMRSPEQSSCNTEIIGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHHHHH RAALCQSAALIGGGGLHGNVGKGLPCCLMRPPIS HHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA