Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is ansB [H]
Identifier: 91788813
GI number: 91788813
Start: 3113666
End: 3114616
Strand: Reverse
Name: ansB [H]
Synonym: Bpro_2953
Alternate gene names: 91788813
Gene position: 3114616-3113666 (Counterclockwise)
Preceding gene: 91788823
Following gene: 91788806
Centisome position: 59.89
GC content: 64.35
Gene sequence:
>951_bases ATGAATCGTCAAACCATTGTGATTTTGGGTACCGGCGGCACGATTGCCGGTCGCGCAGCCTCGGCCTCGGACAATATCGG TTACACCGCGGCGGAAGTCGGTATTGAGCAGCTGGTGGCGGCGATTCCCGGGCTGGCCGATGCCGGCCCATTGATCGCCG AGCAGGTTGCGCAGCTTGACAGCAAGGACATGAGCTTTGCCGTGTGGGCGAAACTGGCCGGACGCGTCAACCATTTTCTG GCGCAGCCTGATGTCGCAGGGATCGTTGTTGTCCACGGCACCGACACGCTCGAAGAGACCGCGTATTTTTTACAGGCAGT CTGCGGTCCCGCCAAGCCGGTGGTGCTGACCTGTGCCATGCGCCCGGCAACGGCCCTGGTACCGGACGGCCCGCAGAACG TGCTCGATGCCGTGGCCGTGGCCCGGCACTCCGGGGCGAAAGGGGTGGTGGCCGTCTGCGCTGGCTCCGTCCACACTGCG CGGGACGTGCAGAAGGTGCATCCCTACCAGGTGGACGCGTTCAGTTCGGGCGACGCGGGCCCGCTGGGCTATGTCGAGGA GGGTAGCCTGAGGTTATTGAGGAATTGGCCTGAAGCTGACGCAAGCCGGGCGCCGGACGCCACGAAAATAATGGCAGCCC TCGACGACGCCACGGACTGGCCGCATGTTGAAATCGTCATGAGTCACGCCGGTGCCCGTGGCGCCGTGGTGCAAGCCCTT ATGCAGCAAGGCGTCCGGGGCCTGGTTGTCGCCACTACGGGCAACGGCACCGTACATCAGGCACTGGAAGCTGCTTTGCT CAAGGCGCAGGCCGCCGGCGTCAGCGTGGTTCGCGCAACGCGCTGCCCCAATGGCCGGGTGTTGCCCAAACCGGGTGATC TCATTCCCGATTCGCAGGGGTTGAGTCCGGTGAAGGCGCGGATAGACCTGATGCTTCGTTTGCTGGGCTGA
Upstream 100 bases:
>100_bases AACCCGGGGTTGTCGCGTGCGTCATCTGTTGTAGTGACCTGTTTTAATATCCAGTAACTGTATTTTCATCCAGTTTTTAA AAGAACGCAAGTCCCTCCAT
Downstream 100 bases:
>100_bases GGCCCGGCGCCATGCCGTCTTCAGGATGGCCCGAAGGCCTTTCGGGTCGCCTCAGCTTGACAGGGCCTGGAAGGCTCTTT CGGTGATCTCATCCACACCG
Product: asparaginase
Products: NA
Alternate protein names: L-ASNase; L-asparagine amidohydrolase [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNRQTIVILGTGGTIAGRAASASDNIGYTAAEVGIEQLVAAIPGLADAGPLIAEQVAQLDSKDMSFAVWAKLAGRVNHFL AQPDVAGIVVVHGTDTLEETAYFLQAVCGPAKPVVLTCAMRPATALVPDGPQNVLDAVAVARHSGAKGVVAVCAGSVHTA RDVQKVHPYQVDAFSSGDAGPLGYVEEGSLRLLRNWPEADASRAPDATKIMAALDDATDWPHVEIVMSHAGARGAVVQAL MQQGVRGLVVATTGNGTVHQALEAALLKAQAAGVSVVRATRCPNGRVLPKPGDLIPDSQGLSPVKARIDLMLRLLG
Sequences:
>Translated_316_residues MNRQTIVILGTGGTIAGRAASASDNIGYTAAEVGIEQLVAAIPGLADAGPLIAEQVAQLDSKDMSFAVWAKLAGRVNHFL AQPDVAGIVVVHGTDTLEETAYFLQAVCGPAKPVVLTCAMRPATALVPDGPQNVLDAVAVARHSGAKGVVAVCAGSVHTA RDVQKVHPYQVDAFSSGDAGPLGYVEEGSLRLLRNWPEADASRAPDATKIMAALDDATDWPHVEIVMSHAGARGAVVQAL MQQGVRGLVVATTGNGTVHQALEAALLKAQAAGVSVVRATRCPNGRVLPKPGDLIPDSQGLSPVKARIDLMLRLLG >Mature_316_residues MNRQTIVILGTGGTIAGRAASASDNIGYTAAEVGIEQLVAAIPGLADAGPLIAEQVAQLDSKDMSFAVWAKLAGRVNHFL AQPDVAGIVVVHGTDTLEETAYFLQAVCGPAKPVVLTCAMRPATALVPDGPQNVLDAVAVARHSGAKGVVAVCAGSVHTA RDVQKVHPYQVDAFSSGDAGPLGYVEEGSLRLLRNWPEADASRAPDATKIMAALDDATDWPHVEIVMSHAGARGAVVQAL MQQGVRGLVVATTGNGTVHQALEAALLKAQAAGVSVVRATRCPNGRVLPKPGDLIPDSQGLSPVKARIDLMLRLLG
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1789327, Length=298, Percent_Identity=36.5771812080537, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1788065, Length=295, Percent_Identity=27.4576271186441, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193207372, Length=240, Percent_Identity=28.3333333333333, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17558278, Length=240, Percent_Identity=28.3333333333333, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI193207374, Length=242, Percent_Identity=28.5123966942149, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17558280, Length=242, Percent_Identity=28.5123966942149, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323189, Length=330, Percent_Identity=30.9090909090909, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323187, Length=330, Percent_Identity=30.9090909090909, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323186, Length=330, Percent_Identity=30.9090909090909, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323184, Length=330, Percent_Identity=30.9090909090909, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320527, Length=323, Percent_Identity=30.6501547987616, Blast_Score=119, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004550 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 32554; Mature: 32554
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRQTIVILGTGGTIAGRAASASDNIGYTAAEVGIEQLVAAIPGLADAGPLIAEQVAQLD CCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC SKDMSFAVWAKLAGRVNHFLAQPDVAGIVVVHGTDTLEETAYFLQAVCGPAKPVVLTCAM CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEC RPATALVPDGPQNVLDAVAVARHSGAKGVVAVCAGSVHTARDVQKVHPYQVDAFSSGDAG CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCEEEECCCCCCCC PLGYVEEGSLRLLRNWPEADASRAPDATKIMAALDDATDWPHVEIVMSHAGARGAVVQAL CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHH MQQGVRGLVVATTGNGTVHQALEAALLKAQAAGVSVVRATRCPNGRVLPKPGDLIPDSQG HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCC LSPVKARIDLMLRLLG CCHHHHHHHHHHHHCC >Mature Secondary Structure MNRQTIVILGTGGTIAGRAASASDNIGYTAAEVGIEQLVAAIPGLADAGPLIAEQVAQLD CCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC SKDMSFAVWAKLAGRVNHFLAQPDVAGIVVVHGTDTLEETAYFLQAVCGPAKPVVLTCAM CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEC RPATALVPDGPQNVLDAVAVARHSGAKGVVAVCAGSVHTARDVQKVHPYQVDAFSSGDAG CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCEEEECCCCCCCC PLGYVEEGSLRLLRNWPEADASRAPDATKIMAALDDATDWPHVEIVMSHAGARGAVVQAL CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHH MQQGVRGLVVATTGNGTVHQALEAALLKAQAAGVSVVRATRCPNGRVLPKPGDLIPDSQG HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCC LSPVKARIDLMLRLLG CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3026924; 3194219; 3379033; 8348975 [H]