Click here to switch to the map view.

The map label for this gene is ppdD [C]

Identifier: 91788743

GI number: 91788743

Start: 3043380

End: 3043778

Strand: Reverse

Name: ppdD [C]

Synonym: Bpro_2882

Alternate gene names: 91788743

Gene position: 3043778-3043380 (Counterclockwise)

Preceding gene: 91788754

Following gene: 91788742

Centisome position: 58.53

GC content: 60.9

Gene sequence:

>399_bases
ATGCGCGTCGGCAAGCAAAATGGGTTCACGCTGATCGAACTGATGGTCACGGTGGCTATCGTCGGAATCCTGGCTGCGGT
GGCCTATCCCTCCTACACCAGCCACATCAGGAAAGGCGTGCGGCGGGCGGCCCAGGCTCAGATGATGGATATCGCCAATC
GGGAGCAGCAATACCTGCTGGCCAACCGTACTTTCGCCTCCTACGATACGTTGATGCTCAGTGGCTATTCGCTGCCCACT
GACCTCACTGCCAAGTACACGCCCACGATCGCCCTGGTCGGCGGTACGACTACGGCGCCCGGATTCACCATCACGTTCAC
GGCCATTGGCGGCCAGGCCGAAGATGGCAACCTGACGCTCACCAGCGAAGGGGTGAAGGACCCGGTGGGCAAATGGTAG

Upstream 100 bases:

>100_bases
CACTCGTTCGGGTAAAGCGACCGGTTGTCGGGCAGTAGGTGCTTTCGGAAGTCGCCTGCGCTAAGGTTCAGCCTGAAATA
ACCTAACAACCGGAGATGGC

Downstream 100 bases:

>100_bases
CCCGCGTGCCGTCCCGCATCCCGCGTCAACAACTCGGCGCTTCGATGATCGAAGTGCTGGTCACCATGATCATCATCGCC
TTCGGCCTGCTCGGGATGGC

Product: methylation

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilE; General Secretion Pathway Protein H; Type 4 Fimbrial Biogenesis Transmembrane Protein; Methylation; Type 4 Fimbrial Biogenesis Protein PilE; Type IV Pilin-Related Protein; Type IV Pilin; Protein Involved In Methylation; Fimbrial Protein Pilin; Type IV PilE-Like Pilus Assembly Protein; Fimbrial Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRVGKQNGFTLIELMVTVAIVGILAAVAYPSYTSHIRKGVRRAAQAQMMDIANREQQYLLANRTFASYDTLMLSGYSLPT
DLTAKYTPTIALVGGTTTAPGFTITFTAIGGQAEDGNLTLTSEGVKDPVGKW

Sequences:

>Translated_132_residues
MRVGKQNGFTLIELMVTVAIVGILAAVAYPSYTSHIRKGVRRAAQAQMMDIANREQQYLLANRTFASYDTLMLSGYSLPT
DLTAKYTPTIALVGGTTTAPGFTITFTAIGGQAEDGNLTLTSEGVKDPVGKW
>Mature_132_residues
MRVGKQNGFTLIELMVTVAIVGILAAVAYPSYTSHIRKGVRRAAQAQMMDIANREQQYLLANRTFASYDTLMLSGYSLPT
DLTAKYTPTIALVGGTTTAPGFTITFTAIGGQAEDGNLTLTSEGVKDPVGKW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14150; Mature: 14150

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGKQNGFTLIELMVTVAIVGILAAVAYPSYTSHIRKGVRRAAQAQMMDIANREQQYLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ANRTFASYDTLMLSGYSLPTDLTAKYTPTIALVGGTTTAPGFTITFTAIGGQAEDGNLTL
HCCCCCCHHHEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEEE
TSEGVKDPVGKW
ECCCCCCCCCCC
>Mature Secondary Structure
MRVGKQNGFTLIELMVTVAIVGILAAVAYPSYTSHIRKGVRRAAQAQMMDIANREQQYLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ANRTFASYDTLMLSGYSLPTDLTAKYTPTIALVGGTTTAPGFTITFTAIGGQAEDGNLTL
HCCCCCCHHHEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEEE
TSEGVKDPVGKW
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA