The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788723

Identifier: 91788723

GI number: 91788723

Start: 3017644

End: 3018450

Strand: Reverse

Name: 91788723

Synonym: Bpro_2862

Alternate gene names: NA

Gene position: 3018450-3017644 (Counterclockwise)

Preceding gene: 91788724

Following gene: 91788722

Centisome position: 58.04

GC content: 64.06

Gene sequence:

>807_bases
ATGGCCAGCCTGTCCGACCAGGAAATCCGGCACTATCGGGACCAGGGCTACGTCATTCCGCAGTTCCGGCTCAGCGATGC
CTGGGTCCGCCGCATGCAGGATGCGCTGAACACCTTGATCCGCAACAACCCGGGCGTGCGCCCCGAAAAACTGGTGAGCG
CCCATATCGAGGGCCACAACGATGAGGGCGTGCGGGGCAACCGGGATTTTTTCGATCTCGCCATGAACCCGGATATCGTT
GACCTGGTCACGCAGGTGATCGGGCCCGACGTCATCCTGTGGGGCTGCCACGTATTCTGCAAGCCGGCCAGCGAAGGTTT
TGAAACGCCCTGGCACCAGGACGGCCATTACTGGCCCATCCGCCCGCTGGCCAACTGCACCGTCTGGGTGGCGCTGGAGC
CGAGCACGCGCGAGAATGGCTGCCTGCGCGTGATCCCCGGTTCGCACGCCGCCAAAGTGCTTCATCCTCACCTGCATGAA
GACCGCACCGATCTGACGCTGAACCAGCGCATGGCCGAAGGCAGCTTTGACGTGAACGACGCGGTGGATCTGGAACTTGA
GCCCGGCCAGATGTCTTTGCACGACATCTACATGATCCATGGCGCCCAGGCCAATACCTCCGGCATCCGGCGCACCGGCG
TGGCGCTGCGCTATATGCCGGGCACTTCATTGTTCGACCGCAGCCTGCGCCCATCGGACGGCGAGACCGGCGTCCCGGTC
AGCTTTGCTACGCGGCCTTTGTGGCTGCTCCGGGGCGAGGACCGGACAGGGCGCAATGATTTCTCGGTGGGCCACCGTGG
CTCGTAG

Upstream 100 bases:

>100_bases
GACCGCCGCTACGAACGGCTGCAGAGCTATGGCCGTTTCACCGACACCAAAGCCGACGCCGGCAAATAGGGCGCTACGGC
AAGCCCAAGCGAACAAGCCC

Downstream 100 bases:

>100_bases
CGCGACGGCGCAAGGCTTACCCGAAGCGCTGGCTTCTTTCTCTCCGGGCCTGCCTTTCGCTGTAGCGCTCAGCGGCGGCG
CCGATTCAACCGCCTTGCTG

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; L-Proline 4-Hydroxylase; Non-Ribosomal Peptide Synthase Related Protein; Coronamic Acid Synthetase Chlorinating Component; SnoK-Like Protein; Phytanoyl-CoA Dioxygenase Superfamily Protein; Phytanoyl-CoA Dioxygenase PhyH Family

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MASLSDQEIRHYRDQGYVIPQFRLSDAWVRRMQDALNTLIRNNPGVRPEKLVSAHIEGHNDEGVRGNRDFFDLAMNPDIV
DLVTQVIGPDVILWGCHVFCKPASEGFETPWHQDGHYWPIRPLANCTVWVALEPSTRENGCLRVIPGSHAAKVLHPHLHE
DRTDLTLNQRMAEGSFDVNDAVDLELEPGQMSLHDIYMIHGAQANTSGIRRTGVALRYMPGTSLFDRSLRPSDGETGVPV
SFATRPLWLLRGEDRTGRNDFSVGHRGS

Sequences:

>Translated_268_residues
MASLSDQEIRHYRDQGYVIPQFRLSDAWVRRMQDALNTLIRNNPGVRPEKLVSAHIEGHNDEGVRGNRDFFDLAMNPDIV
DLVTQVIGPDVILWGCHVFCKPASEGFETPWHQDGHYWPIRPLANCTVWVALEPSTRENGCLRVIPGSHAAKVLHPHLHE
DRTDLTLNQRMAEGSFDVNDAVDLELEPGQMSLHDIYMIHGAQANTSGIRRTGVALRYMPGTSLFDRSLRPSDGETGVPV
SFATRPLWLLRGEDRTGRNDFSVGHRGS
>Mature_267_residues
ASLSDQEIRHYRDQGYVIPQFRLSDAWVRRMQDALNTLIRNNPGVRPEKLVSAHIEGHNDEGVRGNRDFFDLAMNPDIVD
LVTQVIGPDVILWGCHVFCKPASEGFETPWHQDGHYWPIRPLANCTVWVALEPSTRENGCLRVIPGSHAAKVLHPHLHED
RTDLTLNQRMAEGSFDVNDAVDLELEPGQMSLHDIYMIHGAQANTSGIRRTGVALRYMPGTSLFDRSLRPSDGETGVPVS
FATRPLWLLRGEDRTGRNDFSVGHRGS

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI5453884, Length=229, Percent_Identity=27.0742358078603, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI83281447, Length=153, Percent_Identity=32.0261437908497, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544582, Length=236, Percent_Identity=29.2372881355932, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30134; Mature: 30003

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLSDQEIRHYRDQGYVIPQFRLSDAWVRRMQDALNTLIRNNPGVRPEKLVSAHIEGHN
CCCCCHHHHHHHHHCCEEECEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCC
DEGVRGNRDFFDLAMNPDIVDLVTQVIGPDVILWGCHVFCKPASEGFETPWHQDGHYWPI
CCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECEEEECCCCCCCCCCCCCCCCEECC
RPLANCTVWVALEPSTRENGCLRVIPGSHAAKVLHPHLHEDRTDLTLNQRMAEGSFDVND
CCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCC
AVDLELEPGQMSLHDIYMIHGAQANTSGIRRTGVALRYMPGTSLFDRSLRPSDGETGVPV
EEEEEECCCCCCEEEEEEEECCCCCCCCCEECCEEEEECCCCHHHHCCCCCCCCCCCCCE
SFATRPLWLLRGEDRTGRNDFSVGHRGS
EECCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASLSDQEIRHYRDQGYVIPQFRLSDAWVRRMQDALNTLIRNNPGVRPEKLVSAHIEGHN
CCCCHHHHHHHHHCCEEECEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCC
DEGVRGNRDFFDLAMNPDIVDLVTQVIGPDVILWGCHVFCKPASEGFETPWHQDGHYWPI
CCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECEEEECCCCCCCCCCCCCCCCEECC
RPLANCTVWVALEPSTRENGCLRVIPGSHAAKVLHPHLHEDRTDLTLNQRMAEGSFDVND
CCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCC
AVDLELEPGQMSLHDIYMIHGAQANTSGIRRTGVALRYMPGTSLFDRSLRPSDGETGVPV
EEEEEECCCCCCEEEEEEEECCCCCCCCCEECCEEEEECCCCHHHHCCCCCCCCCCCCCE
SFATRPLWLLRGEDRTGRNDFSVGHRGS
EECCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA