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The map label for this gene is gbpR [H]

Identifier: 91788694

GI number: 91788694

Start: 2986444

End: 2987463

Strand: Reverse

Name: gbpR [H]

Synonym: Bpro_2833

Alternate gene names: 91788694

Gene position: 2987463-2986444 (Counterclockwise)

Preceding gene: 91788707

Following gene: 91788685

Centisome position: 57.45

GC content: 63.53

Gene sequence:

>1020_bases
ATGCTCATCGAGGCCCCCTCAAGGTCATCAAGGTCATCAAGGTCATCATCTTTTTTCTGCGCTGCTTCCATGTCCCATCC
TGCACCCATTCCCCAGCTTCTCAACCGCCTGCGCATGCGCCAGGTGGCCCTCATCCTGGCGGTGGGCGAGCACGGCACCC
TGCGCAAGGCTTCGGCCGAGCTGGGCATGACGCAGCCGGCGGCCACCAAAATGATCCAGGAGCTGGAGTCGGCCCTGGGT
CAGCGCCTGTTTGAACGGGTCGGGCGCGGGCAGAAGCTCACCGCAGCGGGCACCAGCGTGCTGGGCTACTTTCGCGGCAT
GCGGGGCTCGATGGAATCGATGACGCGCGAGCTGGCCGAGTTGCAGCTGGGCTCTTCGGGGCGGCTCTCAATCGGTACCA
TCATGGCGCCGTCACCCACCTTGCTGACGAACGCCATCATTGCGCTCAAGAAGGCCTACCCACTGTTGTCGGTCGGCATC
ACCATGGACACCAGCGACCGACTGCTGGAGTTGCTGCGCGAAGGCGCGCTGGACGTGGCGATTGGCCGTATGCGTGATGA
ACACTGGCAGGACTACAGCTTTGCGTCGCTGGATAACGAAGCGCTGTCGGTGGTGGTGGGGGCGCACCACCCGCTGGGCC
ACAAAAAATCGGTGAAGTTTGCCAGCCTGCTGGACTACCCCTGGATATTGCAGCCTACCGGCAGCCCGATGCGTGAGGTG
CTGGACCAGGAGTTTCGCATGCTGCAGATGCCGGCGCCCCGAAGCCTGATTGAAACCGCTTCCATCCTGACCACCACCGA
CCTGATCGACAAGACGGACATGATTGCCGTCATGCCGCGGTCGATTGCCGACACCTATGCCCAACACGGCCTGCTCAAGG
TCCTGCCTTGCGAGATCCGGCACAAGATGGAGTCGTTCGGCTCCATCACCCGCAAGGACAGGCCGCTCAGCGAGGCGGCG
CGGTTTTTCCTCGGGGCGCTGCACCAGCGGGCGCCGTCTGGCCTTGCCGATGGGGTGTAG

Upstream 100 bases:

>100_bases
ATCATTGTTGTGAACGAATGCGCTGATGGTAGAGACCCTGACAGTTAACGTAAATTGAAAATTGATGATTATTTGATAAT
CTGTGGTTATCATTCAAAAG

Downstream 100 bases:

>100_bases
CTACCTGAAATTCAATCCGCCCCCGACCGCCACACCCGCGCCAGCGTAGCGAGCTTGCCGCGCACGCTGAGGCGGTCGTT
CGACAGTGCGTCGATAAAGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Galactose-binding protein regulator; GBP regulator [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLIEAPSRSSRSSRSSSFFCAASMSHPAPIPQLLNRLRMRQVALILAVGEHGTLRKASAELGMTQPAATKMIQELESALG
QRLFERVGRGQKLTAAGTSVLGYFRGMRGSMESMTRELAELQLGSSGRLSIGTIMAPSPTLLTNAIIALKKAYPLLSVGI
TMDTSDRLLELLREGALDVAIGRMRDEHWQDYSFASLDNEALSVVVGAHHPLGHKKSVKFASLLDYPWILQPTGSPMREV
LDQEFRMLQMPAPRSLIETASILTTTDLIDKTDMIAVMPRSIADTYAQHGLLKVLPCEIRHKMESFGSITRKDRPLSEAA
RFFLGALHQRAPSGLADGV

Sequences:

>Translated_339_residues
MLIEAPSRSSRSSRSSSFFCAASMSHPAPIPQLLNRLRMRQVALILAVGEHGTLRKASAELGMTQPAATKMIQELESALG
QRLFERVGRGQKLTAAGTSVLGYFRGMRGSMESMTRELAELQLGSSGRLSIGTIMAPSPTLLTNAIIALKKAYPLLSVGI
TMDTSDRLLELLREGALDVAIGRMRDEHWQDYSFASLDNEALSVVVGAHHPLGHKKSVKFASLLDYPWILQPTGSPMREV
LDQEFRMLQMPAPRSLIETASILTTTDLIDKTDMIAVMPRSIADTYAQHGLLKVLPCEIRHKMESFGSITRKDRPLSEAA
RFFLGALHQRAPSGLADGV
>Mature_339_residues
MLIEAPSRSSRSSRSSSFFCAASMSHPAPIPQLLNRLRMRQVALILAVGEHGTLRKASAELGMTQPAATKMIQELESALG
QRLFERVGRGQKLTAAGTSVLGYFRGMRGSMESMTRELAELQLGSSGRLSIGTIMAPSPTLLTNAIIALKKAYPLLSVGI
TMDTSDRLLELLREGALDVAIGRMRDEHWQDYSFASLDNEALSVVVGAHHPLGHKKSVKFASLLDYPWILQPTGSPMREV
LDQEFRMLQMPAPRSLIETASILTTTDLIDKTDMIAVMPRSIADTYAQHGLLKVLPCEIRHKMESFGSITRKDRPLSEAA
RFFLGALHQRAPSGLADGV

Specific function: Does not seem to be required for sbpA expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=298, Percent_Identity=26.1744966442953, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787601, Length=284, Percent_Identity=27.4647887323944, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI157672245, Length=256, Percent_Identity=27.34375, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1789506, Length=285, Percent_Identity=22.8070175438596, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787879, Length=197, Percent_Identity=27.9187817258883, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787530, Length=212, Percent_Identity=24.5283018867925, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787128, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI145693105, Length=283, Percent_Identity=25.4416961130742, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790399, Length=204, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 37110; Mature: 37110

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEAPSRSSRSSRSSSFFCAASMSHPAPIPQLLNRLRMRQVALILAVGEHGTLRKASAE
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH
LGMTQPAATKMIQELESALGQRLFERVGRGQKLTAAGTSVLGYFRGMRGSMESMTRELAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHH
LQLGSSGRLSIGTIMAPSPTLLTNAIIALKKAYPLLSVGITMDTSDRLLELLREGALDVA
HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEECEEECCHHHHHHHHHHCCHHHH
IGRMRDEHWQDYSFASLDNEALSVVVGAHHPLGHKKSVKFASLLDYPWILQPTGSPMREV
HHHHHHHHCCCCCHHHCCCHHHEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCHHHHH
LDQEFRMLQMPAPRSLIETASILTTTDLIDKTDMIAVMPRSIADTYAQHGLLKVLPCEIR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCHHHH
HKMESFGSITRKDRPLSEAARFFLGALHQRAPSGLADGV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLIEAPSRSSRSSRSSSFFCAASMSHPAPIPQLLNRLRMRQVALILAVGEHGTLRKASAE
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHH
LGMTQPAATKMIQELESALGQRLFERVGRGQKLTAAGTSVLGYFRGMRGSMESMTRELAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHH
LQLGSSGRLSIGTIMAPSPTLLTNAIIALKKAYPLLSVGITMDTSDRLLELLREGALDVA
HHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEECEEECCHHHHHHHHHHCCHHHH
IGRMRDEHWQDYSFASLDNEALSVVVGAHHPLGHKKSVKFASLLDYPWILQPTGSPMREV
HHHHHHHHCCCCCHHHCCCHHHEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCHHHHH
LDQEFRMLQMPAPRSLIETASILTTTDLIDKTDMIAVMPRSIADTYAQHGLLKVLPCEIR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCHHHH
HKMESFGSITRKDRPLSEAARFFLGALHQRAPSGLADGV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10361275 [H]