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The map label for this gene is ihfB [H]

Identifier: 91787670

GI number: 91787670

Start: 1848433

End: 1848747

Strand: Reverse

Name: ihfB [H]

Synonym: Bpro_1788

Alternate gene names: 91787670

Gene position: 1848747-1848433 (Counterclockwise)

Preceding gene: 91787671

Following gene: 91787669

Centisome position: 35.55

GC content: 61.27

Gene sequence:

>315_bases
ATGACCCGAAGCGACCTTGTAGAAGAACTGGCAGCCCGATTCAGCCAGCTGACGCACCGCGATGCCGAATATGCCGTCAA
GACGATTCTTGATGCCATGAGCGACGCGCTGGTACGCGGCCACCGGATTGAAATCAGGGGTTTTGGCAGTTTCTCCATCA
ACCGTCGCCCTCCCCGCATGGGTCGCAACCCCCGCTCCGGCGAAAGTGTGGCCATCCCCGAAAAGCGGGTGCCCCACTTC
AAGCCGGGAAAGGCGTTGCGGGAGGCGGTCGATGCACGGACCGAGGAATTGCTGACGGTCACGGACTCCAGATGA

Upstream 100 bases:

>100_bases
CCTGCTGCGTGCCAAGCTGGACAACAACGAGAAGTAAAGCAACCGCGCAGCGGTGTGATTCGCCCCAGGCGGGTCGCATC
GCTGCACAGCATCTTTATCC

Downstream 100 bases:

>100_bases
GGCTTTCAGTATTTCTCCCGGTGGGCTGGCTACAATCTCCAGACCACTAGGGGGATTGCCAGTGAAATACCTGATGTGGC
TGCTCAAGGCAGCCATTTTT

Product: integration host factor subunit beta

Products: NA

Alternate protein names: IHF-beta [H]

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTRSDLVEELAARFSQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSINRRPPRMGRNPRSGESVAIPEKRVPHF
KPGKALREAVDARTEELLTVTDSR

Sequences:

>Translated_104_residues
MTRSDLVEELAARFSQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSINRRPPRMGRNPRSGESVAIPEKRVPHF
KPGKALREAVDARTEELLTVTDSR
>Mature_103_residues
TRSDLVEELAARFSQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSINRRPPRMGRNPRSGESVAIPEKRVPHFK
PGKALREAVDARTEELLTVTDSR

Specific function: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

Organism=Escherichia coli, GI1787141, Length=88, Percent_Identity=53.4090909090909, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI1790433, Length=90, Percent_Identity=35.5555555555556, Blast_Score=73, Evalue=3e-15,
Organism=Escherichia coli, GI1786644, Length=91, Percent_Identity=34.0659340659341, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI1788005, Length=91, Percent_Identity=32.967032967033, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR010992
- InterPro:   IPR005685 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 11744; Mature: 11612

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSDLVEELAARFSQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSINRRPPRM
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
GRNPRSGESVAIPEKRVPHFKPGKALREAVDARTEELLTVTDSR
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRSDLVEELAARFSQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSINRRPPRM
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
GRNPRSGESVAIPEKRVPHFKPGKALREAVDARTEELLTVTDSR
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]