Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787322
Identifier: 91787322
GI number: 91787322
Start: 1473839
End: 1474843
Strand: Direct
Name: 91787322
Synonym: Bpro_1427
Alternate gene names: NA
Gene position: 1473839-1474843 (Clockwise)
Preceding gene: 91787321
Following gene: 91787324
Centisome position: 28.34
GC content: 66.07
Gene sequence:
>1005_bases ATGAATGACACGTCCACGGGCGCCCTGAGCCGCCGCCAAGCCCTGCTGTTATCTGCAGGTACTGCCGCCAGTCTGGTGCT TCCCGCAGCGCGGGCGCAAGGCCCTTCCGCCTATCCCGACCGCGCCGTCAAGATCGTGGTGCCTTTTGCACCGGGCGCCG GTACCGACGCCATGGCGCGCCTGGTCGCACAAAAGCTTGGCGAAGTCATGAACGCCACCTTTGTGGTGGACAACAAGGCC GGCGCGTCCGGCGCGATTGGCACGCAGTATGTGGCCCAGGCTCCGGCCGATGGCTACACCCTGCTGCTGGTGGCCTCGCC GTTCACCACGGTGGCGGCATCGCTGCCCAGCGCCAACTACGACCCGCTGCGCCAATTCACGCCGGTCGGCATGATCGCCA GCGGCCCGCTGGTCTGGGCGGCCAACGCCCAGTTGCCGGTCAGCAACATGAAAGAGCTGGTCAAACTGGCCCGGCAGCGG CCGGGTGCCCTCAACTACGGCTCGGCCGGCGCGGGGGGCGTCAACCACCTGGTGCTGGAACTGCTGAAGGCGCGCACCGG CACCTTCATCACGCATATTCCTTACCGCGGCGTGGCACCCGCCACCATGGACATGATTGGTGGGCAAATCCAGCTTGTCA CCGGCACCATTCCCGCCCTGTTGCCTTTCATCAGGAATGGCAGCATCAAGCCCCTGGCCGTCACGAGCGCCAAGCGTTCC AGTGCGTTGCCCGATGTGCCCAGCATGACCGAGGCCGGCATGCCCGGTATCGATGTGGTGAACTATTTCGCGTTGATGGC GCCCATGGGCACGCCCGTGCCCATCGTCAATGCCCTGAACGCCGCCATCAACAAGGTGGTGGCGCTGCCCGACGTGCTCG CCCGCTTCAAGGCCGACGCCGTGGAGCCCGCACCCGGCTCGCCCGCGCTGCTGGGCCACTTCATCGAAGCCGACTACCGC GCCTGGCGCAACGTCGTGAAGACGCAAAACCTCAAAATAGAGTGA
Upstream 100 bases:
>100_bases CGGGAGCTGAGCGAGGCGCACGGCGGCTGTCACGCCGCTGTCATGCTGCCGTCATGGGCGGCGACGACAATCCGCCGGTT GCCACTTTTTTGGGTTCTAC
Downstream 100 bases:
>100_bases CCCCCACGCTTGCTCACTTCGTGTAGCCGCTGCCCCCTGAGGGGGCCGCCCGCCTGCGGCCCGGCAAAGCCGGTTCCGCG GCTCAGGCTAGGTTGAAGAT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNDTSTGALSRRQALLLSAGTAASLVLPAARAQGPSAYPDRAVKIVVPFAPGAGTDAMARLVAQKLGEVMNATFVVDNKA GASGAIGTQYVAQAPADGYTLLLVASPFTTVAASLPSANYDPLRQFTPVGMIASGPLVWAANAQLPVSNMKELVKLARQR PGALNYGSAGAGGVNHLVLELLKARTGTFITHIPYRGVAPATMDMIGGQIQLVTGTIPALLPFIRNGSIKPLAVTSAKRS SALPDVPSMTEAGMPGIDVVNYFALMAPMGTPVPIVNALNAAINKVVALPDVLARFKADAVEPAPGSPALLGHFIEADYR AWRNVVKTQNLKIE
Sequences:
>Translated_334_residues MNDTSTGALSRRQALLLSAGTAASLVLPAARAQGPSAYPDRAVKIVVPFAPGAGTDAMARLVAQKLGEVMNATFVVDNKA GASGAIGTQYVAQAPADGYTLLLVASPFTTVAASLPSANYDPLRQFTPVGMIASGPLVWAANAQLPVSNMKELVKLARQR PGALNYGSAGAGGVNHLVLELLKARTGTFITHIPYRGVAPATMDMIGGQIQLVTGTIPALLPFIRNGSIKPLAVTSAKRS SALPDVPSMTEAGMPGIDVVNYFALMAPMGTPVPIVNALNAAINKVVALPDVLARFKADAVEPAPGSPALLGHFIEADYR AWRNVVKTQNLKIE >Mature_334_residues MNDTSTGALSRRQALLLSAGTAASLVLPAARAQGPSAYPDRAVKIVVPFAPGAGTDAMARLVAQKLGEVMNATFVVDNKA GASGAIGTQYVAQAPADGYTLLLVASPFTTVAASLPSANYDPLRQFTPVGMIASGPLVWAANAQLPVSNMKELVKLARQR PGALNYGSAGAGGVNHLVLELLKARTGTFITHIPYRGVAPATMDMIGGQIQLVTGTIPALLPFIRNGSIKPLAVTSAKRS SALPDVPSMTEAGMPGIDVVNYFALMAPMGTPVPIVNALNAAINKVVALPDVLARFKADAVEPAPGSPALLGHFIEADYR AWRNVVKTQNLKIE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34596; Mature: 34596
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTSTGALSRRQALLLSAGTAASLVLPAARAQGPSAYPDRAVKIVVPFAPGAGTDAMAR CCCCCCHHHHHHHEEEEECCCHHHHHCCHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHH LVAQKLGEVMNATFVVDNKAGASGAIGTQYVAQAPADGYTLLLVASPFTTVAASLPSANY HHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCC DPLRQFTPVGMIASGPLVWAANAQLPVSNMKELVKLARQRPGALNYGSAGAGGVNHLVLE CHHHHCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH LLKARTGTFITHIPYRGVAPATMDMIGGQIQLVTGTIPALLPFIRNGSIKPLAVTSAKRS HHHHCCCCEEEECCCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEEECCHHC SALPDVPSMTEAGMPGIDVVNYFALMAPMGTPVPIVNALNAAINKVVALPDVLARFKADA CCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VEPAPGSPALLGHFIEADYRAWRNVVKTQNLKIE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDTSTGALSRRQALLLSAGTAASLVLPAARAQGPSAYPDRAVKIVVPFAPGAGTDAMAR CCCCCCHHHHHHHEEEEECCCHHHHHCCHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHH LVAQKLGEVMNATFVVDNKAGASGAIGTQYVAQAPADGYTLLLVASPFTTVAASLPSANY HHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCC DPLRQFTPVGMIASGPLVWAANAQLPVSNMKELVKLARQRPGALNYGSAGAGGVNHLVLE CHHHHCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH LLKARTGTFITHIPYRGVAPATMDMIGGQIQLVTGTIPALLPFIRNGSIKPLAVTSAKRS HHHHCCCCEEEECCCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEEECCHHC SALPDVPSMTEAGMPGIDVVNYFALMAPMGTPVPIVNALNAAINKVVALPDVLARFKADA CCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VEPAPGSPALLGHFIEADYRAWRNVVKTQNLKIE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]