Click here to switch to the map view.

The map label for this gene is yggW [H]

Identifier: 91787237

GI number: 91787237

Start: 1381053

End: 1382237

Strand: Direct

Name: yggW [H]

Synonym: Bpro_1341

Alternate gene names: 91787237

Gene position: 1381053-1382237 (Clockwise)

Preceding gene: 91787236

Following gene: 91787238

Centisome position: 26.56

GC content: 61.01

Gene sequence:

>1185_bases
GTGAAAGACATCCAGCACTACATGCGCAGCGGTACGCTGCAGCTGGCCGCCTTGCCGCCGCTGTCGCTGTATGTGCATTT
GCCGTGGTGCCTCAAGAAGTGTCCTTACTGCGACTTCAACTCGCATGAAGTCAGTGGCGAGATGCCCGAGCAGCGCTACC
TGGATGCGCTCATCGCTGACCTGGAGGCCGCCCTGCCGCTGGTCTGGGGCCGGACGGTGCACAGCATTTTTATTGGTGGT
GGCACGCCCAGCCTGTTCTCGCCGCAGGCGATTGACCGCCTGCTCGGCGATATTCGCGCCCGGCTCAGGCTGGAGGCCGA
TTGCGAGATCACGCTCGAAGCCAACCCCGGTACGTTTGAAAAAGACCGCTTCAAGGCCTTTCGCAGCGCCGGGGTGACGC
GCCTGTCCGTCGGCGTGCAGAGTTTTGACGACCGGCACCTGAAGGCCTTGGGCCGTGTGCACGACCGTGCCCAGGCGATT
GCGGCGGTTGAAGAGGCGGCGCAGGCGTTTGACACCTTCAACCTCGACATCATGTATGCCTTGCCGGGCCAGACGCTGGA
CAACCTCGCGCAGGACATGCGGCAGGCGCTTGCGTTGCAGCCACCGCATATTTCGATTTACCACCTGACGATTGAGCCGA
ACACCTACTTTGCCAAATTCCCGCCGGCCATTCCGGAAGAGGACATGGCTTATGCGATGCTGGACAAGATCACCGAGATG
ACCGAAGGCGCCGGGCTGCAGCGTTATGAGGTGTCGGCCTATGCCAGAGCCGGTCACCAGTGTTTTCACAACCTCAACTA
CTGGCAGTTTGGCGATTACCTGGGCATCGGCGCAGGCGCGCATGGCAAGCTCAGCTTCGCGCACAGGGTGGTTCGCCAGG
TCCGCTACCGCGACCCCAAGCTCTACATGGAAAAAGCCCTGGCCGGGGATGCCGTGACGCAGGAAACCGAAGTCAGCCGC
ACCGAGTTGCCTTTTGAGTTCATGCTCAACGCCTTGCGCCTGAGGGAGGGTTTCAAGCTCCAGGATTTTTGCGACAAGAC
CGGCCTGCCTCTCACCGCCATCCAGCAAGGCCTGGAAGAGGGCGAGCGCAAGGGCCTGCTTGAGCGCGACTTTGTCCGCG
TGAAGCCGACCGAGCGCGGTTTTGATTTTTTGAACGACTTGCAGTCACTGTTTTTGGCGCAGTAA

Upstream 100 bases:

>100_bases
TCAAGGGGGCGACGCCAGTGGCCTGGCAAAGCCAGTTCCACGGCGTCTGCTGGCCAAGCCACGCTGGTTGCCGACATCGC
GAACCGTGGGGATTGATCGC

Downstream 100 bases:

>100_bases
GCCAGTAAGCCAGCAAACAGCAGCGCGATCTTATGGAAACCACCAACATCATTCTTCTGCTTGTCACCTGTGCCATCAGC
TTCGGGTTGGGCCGGACCAT

Product: putative oxygen-independent coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKDIQHYMRSGTLQLAALPPLSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIADLEAALPLVWGRTVHSIFIGG
GTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFKAFRSAGVTRLSVGVQSFDDRHLKALGRVHDRAQAI
AAVEEAAQAFDTFNLDIMYALPGQTLDNLAQDMRQALALQPPHISIYHLTIEPNTYFAKFPPAIPEEDMAYAMLDKITEM
TEGAGLQRYEVSAYARAGHQCFHNLNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRYRDPKLYMEKALAGDAVTQETEVSR
TELPFEFMLNALRLREGFKLQDFCDKTGLPLTAIQQGLEEGERKGLLERDFVRVKPTERGFDFLNDLQSLFLAQ

Sequences:

>Translated_394_residues
MKDIQHYMRSGTLQLAALPPLSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIADLEAALPLVWGRTVHSIFIGG
GTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFKAFRSAGVTRLSVGVQSFDDRHLKALGRVHDRAQAI
AAVEEAAQAFDTFNLDIMYALPGQTLDNLAQDMRQALALQPPHISIYHLTIEPNTYFAKFPPAIPEEDMAYAMLDKITEM
TEGAGLQRYEVSAYARAGHQCFHNLNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRYRDPKLYMEKALAGDAVTQETEVSR
TELPFEFMLNALRLREGFKLQDFCDKTGLPLTAIQQGLEEGERKGLLERDFVRVKPTERGFDFLNDLQSLFLAQ
>Mature_394_residues
MKDIQHYMRSGTLQLAALPPLSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIADLEAALPLVWGRTVHSIFIGG
GTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFKAFRSAGVTRLSVGVQSFDDRHLKALGRVHDRAQAI
AAVEEAAQAFDTFNLDIMYALPGQTLDNLAQDMRQALALQPPHISIYHLTIEPNTYFAKFPPAIPEEDMAYAMLDKITEM
TEGAGLQRYEVSAYARAGHQCFHNLNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRYRDPKLYMEKALAGDAVTQETEVSR
TELPFEFMLNALRLREGFKLQDFCDKTGLPLTAIQQGLEEGERKGLLERDFVRVKPTERGFDFLNDLQSLFLAQ

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=296, Percent_Identity=35.8108108108108, Blast_Score=182, Evalue=6e-46,
Organism=Escherichia coli, GI1789325, Length=382, Percent_Identity=47.6439790575916, Blast_Score=360, Evalue=1e-101,
Organism=Escherichia coli, GI87082341, Length=277, Percent_Identity=29.6028880866426, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44460; Mature: 44460

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIQHYMRSGTLQLAALPPLSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIAD
CCHHHHHHHCCCEEEEECCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
LEAALPLVWGRTVHSIFIGGGTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFE
HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCH
KDRFKAFRSAGVTRLSVGVQSFDDRHLKALGRVHDRAQAIAAVEEAAQAFDTFNLDIMYA
HHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LPGQTLDNLAQDMRQALALQPPHISIYHLTIEPNTYFAKFPPAIPEEDMAYAMLDKITEM
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH
TEGAGLQRYEVSAYARAGHQCFHNLNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRYRDPK
HCCCCCEEEHHHHHHHHHHHHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHHCCCHH
LYMEKALAGDAVTQETEVSRTELPFEFMLNALRLREGFKLQDFCDKTGLPLTAIQQGLEE
HHHHHHHCCCHHCCHHHCHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHH
GERKGLLERDFVRVKPTERGFDFLNDLQSLFLAQ
HHHCCCCHHCCEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDIQHYMRSGTLQLAALPPLSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIAD
CCHHHHHHHCCCEEEEECCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
LEAALPLVWGRTVHSIFIGGGTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFE
HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCH
KDRFKAFRSAGVTRLSVGVQSFDDRHLKALGRVHDRAQAIAAVEEAAQAFDTFNLDIMYA
HHHHHHHHHCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LPGQTLDNLAQDMRQALALQPPHISIYHLTIEPNTYFAKFPPAIPEEDMAYAMLDKITEM
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH
TEGAGLQRYEVSAYARAGHQCFHNLNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRYRDPK
HCCCCCEEEHHHHHHHHHHHHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHHCCCHH
LYMEKALAGDAVTQETEVSRTELPFEFMLNALRLREGFKLQDFCDKTGLPLTAIQQGLEE
HHHHHHHCCCHHCCHHHCHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHH
GERKGLLERDFVRVKPTERGFDFLNDLQSLFLAQ
HHHCCCCHHCCEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]