Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787194
Identifier: 91787194
GI number: 91787194
Start: 1340627
End: 1342606
Strand: Direct
Name: 91787194
Synonym: Bpro_1298
Alternate gene names: NA
Gene position: 1340627-1342606 (Clockwise)
Preceding gene: 91787193
Following gene: 91787195
Centisome position: 25.78
GC content: 62.17
Gene sequence:
>1980_bases ATGTCTTTTAACGAAAAATTTGACCAGCACGGCGCATGGCGACGCGGATTTGCCCTGCGGCTGAAGTTGCTTGCCGAGTG GATGAAAGACCACGACCTGCTCGACGCGGCAGTGGAAGAGCGGCTGCACAGGCTGGAGTCGCAGGTGCGCTCCGACAAGG TCATGGTGGCTTTTGTGGCGGAATTTTCGCGTGGCAAATCCGAGCTGATCAATGCCATCTTCTTTGCCGGCTATGGCCGC CGCATCATGCCGGCGAGCGCTGGCCGCACTACCATGTGCCCGACCGAGCTGGGCTACGACGCCGATGTGCCACCCTGCCT GCGCCTGTTGCCGATCGAGACGCGCCTGAAGTCCCAGGCGCTGATGGAATGGCGCATGGTGCCCGAAAAGTGGACGCGCG TTGACCTGGACGTGAACGACCCGGCCCAGCTGGCGCAGGCCCTCGAGAAGGTCGCCGAGGTTCGGCATGTCACCCAGGAA GAGGCCCGCTTGCTCGGATTCTGGAACGACAGCACGCCGGAAGACAACCCCCTGGTGGGCGCCGATGGCTTGATCGAAGT GCCGAAGTGGCGTCATGCGCTGATCAACATCGCGCATCCGCTGCTCAAGCAGGGTCTGGTTATCCTCGATACGCCGGGCC TGAATGCGATAGGCGCCGAGCCTGAGCTGACCGTCAGCCTGATCCCTCAGGCGCATGCGGTGGTGTTCATCCTCGCCGCT GATACCGGTGTGACCAAATCCGACCTGTCCATCTGGCGCGAACACCTGATCACCGAGGGTGACGCCAGCGACGCGCGCCT GGTGGTGCTGAACAAGATCGACACCATGTGGGATGCCTTGAGCACACCCGAGCAGGTGCAGGCGCAAATTGACCGGCAAA GGGTGACATCGGCCGAAATCCTGGGGCTGCCCGAGTCGCAGGTCATTCCGGTTTCTGCGCAAAAAGGATTGCTTGCCAAG GTGACGGGCGACAAGGCGCTTTTGCAGGCCAGCCGCTTGCCGGTGCTTGAGCTCGCATTGGCCCAGGGCGTGATGGGCCA GCGCCAGAAGATCCTGCGCACGGCAGTGGCCGGCGGTATTGGCGAGCTGAGAATCGAGGCGGGGCGCGCCATGCACATTC GCCGGCGTGACCTGGCCGAGCAGATGATCGAGCTGCGCGGCCTGAGAGGCAAGAACATCTCCGTGATCAAGCACATGCGC ACGCGCATCGAGCAGGAGCAGGGCGAATTTGACACCAGCGGCGCCAAAATACATGCCGTGCGGTCCGTGCACCTCAAATT GCTTCGGGAAATGTTTACCCTGCTCAGCACGCCAACGCTGAAGGCCGAGTTGGCCGAACTGACGGCGACGCTCAAGAAGT CGGGTATCAAACTCGGCGTGAGGAAGGCTTACGGCCAGACCTTTTCCCGGCTGCGCGAGGGCCTGCAGAAGTGCCAAATT CTCAGTGGCGAAATCCAGTCCATGCTGACCGCCTCTTTTCGGCAGTTGAATGCTGAATTCAGCTTCTCGCTGCAGGCGCC CAAGGAGCCTGAGCTGGTCCGGTACGTCAACGACCTGGAACTGATACAGCGCAGCCACCTGCAATACCTGGGGGTGAGCA ATATCCTGAAACTGTCGCAGGCCGAGTTTTCCGAGCGGCTGGTTCGGGCGCTGGCCACGCGCCTGCGGGTGGTGTACGAG TCCGCCTTGGGCGAAGTGGAACTCTGGAACAAGTCAGCAGCATCACAGCTGGACGCGCAGCTGCGCGAGCGGCGCCGCAA TTTCGGGCGCAGGCTCGAAGCGATCGAGCGTATCCAGCAGGCAGCATCCGGCCTGGACGAGCGCATTGCCGAGATTGAGG ACCAGGAGAATGTCCTCAATGAGCTCGACACCAAGCTCAAAGAGCTGACCGAGCATCTGATGGGCGGGCCTGCAACCCAT CCCAAGGCAGAAGAGCCGGCGGTCGCCATGGAACAGGCGGCGATGAGCCAGGCAGCCTGA
Upstream 100 bases:
>100_bases TGCGTCAGTTGCCAGAAACCGTGAGCGTTCCAGAGCGGGCGCCCATGGTTGTTTCAGGTGGGCGATGCTATATTGACCAT TCACACCCACACAGTTGACT
Downstream 100 bases:
>100_bases CCCGTGGTCCCTCACCGCTGATGAAGGCCGCAGGCGTTACGCGCAAAGGCCGGCCGACGAATCCGCCTGCTCGTGAGCCA CGCGGGAATCCGGACGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MSFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVAEFSRGKSELINAIFFAGYGR RIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQALMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQE EARLLGFWNDSTPEDNPLVGADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPESQVIPVSAQKGLLAK VTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGIGELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMR TRIEQEQGEFDTSGAKIHAVRSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQAEFSERLVRALATRLRVVYE SALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQAASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATH PKAEEPAVAMEQAAMSQAA
Sequences:
>Translated_659_residues MSFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVAEFSRGKSELINAIFFAGYGR RIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQALMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQE EARLLGFWNDSTPEDNPLVGADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPESQVIPVSAQKGLLAK VTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGIGELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMR TRIEQEQGEFDTSGAKIHAVRSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQAEFSERLVRALATRLRVVYE SALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQAASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATH PKAEEPAVAMEQAAMSQAA >Mature_658_residues SFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVAEFSRGKSELINAIFFAGYGRR IMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQALMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQEE ARLLGFWNDSTPEDNPLVGADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAAD TGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEILGLPESQVIPVSAQKGLLAKV TGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGIGELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMRT RIEQEQGEFDTSGAKIHAVRSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQIL SGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQAEFSERLVRALATRLRVVYES ALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQAASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATHP KAEEPAVAMEQAAMSQAA
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73614; Mature: 73483
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVA CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EFSRGKSELINAIFFAGYGRRIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQA HHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHCCCCCCCCHHHHHCCHHHHHHHHH LMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQEEARLLGFWNDSTPEDNPLVG HHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEC ADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA CCCCEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEC DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEI CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LGLPESQVIPVSAQKGLLAKVTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGI CCCCCCCEEECCCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC GELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMRTRIEQEQGEFDTSGAKIHAV HHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHH RSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQ HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH AEFSERLVRALATRLRVVYESALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQ HHHHHHHHHHHHHHHHHHHHHHCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATHPKAEEPAVAMEQAAMSQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SFNEKFDQHGAWRRGFALRLKLLAEWMKDHDLLDAAVEERLHRLESQVRSDKVMVAFVA CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EFSRGKSELINAIFFAGYGRRIMPASAGRTTMCPTELGYDADVPPCLRLLPIETRLKSQA HHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHCCCCCCCCHHHHHCCHHHHHHHHH LMEWRMVPEKWTRVDLDVNDPAQLAQALEKVAEVRHVTQEEARLLGFWNDSTPEDNPLVG HHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEC ADGLIEVPKWRHALINIAHPLLKQGLVILDTPGLNAIGAEPELTVSLIPQAHAVVFILAA CCCCEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEC DTGVTKSDLSIWREHLITEGDASDARLVVLNKIDTMWDALSTPEQVQAQIDRQRVTSAEI CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LGLPESQVIPVSAQKGLLAKVTGDKALLQASRLPVLELALAQGVMGQRQKILRTAVAGGI CCCCCCCEEECCCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC GELRIEAGRAMHIRRRDLAEQMIELRGLRGKNISVIKHMRTRIEQEQGEFDTSGAKIHAV HHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHH RSVHLKLLREMFTLLSTPTLKAELAELTATLKKSGIKLGVRKAYGQTFSRLREGLQKCQI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSGEIQSMLTASFRQLNAEFSFSLQAPKEPELVRYVNDLELIQRSHLQYLGVSNILKLSQ HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH AEFSERLVRALATRLRVVYESALGEVELWNKSAASQLDAQLRERRRNFGRRLEAIERIQQ HHHHHHHHHHHHHHHHHHHHHHCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASGLDERIAEIEDQENVLNELDTKLKELTEHLMGGPATHPKAEEPAVAMEQAAMSQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA