Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787159
Identifier: 91787159
GI number: 91787159
Start: 1306349
End: 1306705
Strand: Direct
Name: 91787159
Synonym: Bpro_1262
Alternate gene names: NA
Gene position: 1306349-1306705 (Clockwise)
Preceding gene: 91787158
Following gene: 91787175
Centisome position: 25.12
GC content: 59.1
Gene sequence:
>357_bases ATGAAGCAATCCATGAAAGGCGTGGCGAAACGCCTTACCTTTTCGCTGGTTGTCGTGTCTGCCCTGGGTGGATGCGCGGT TTATGGGCCTGCCGACCCTGGACCCTATGCGTACGGAACGTATGCCACCGGCCAACCCGTTTATGTGGCGCCTCCCGTTT ACGCCAATCCCTACCCTTATCCTTACGTCTACCCCTATCCCTACTACTATGACCCTTTGTACATAGGCCCGCCTGTGTCC TTCAACTTCGGCTTCAGCTCATGGAGCGGTCATCGCAGTCATGATCGGGGATTTCGGGGTGGGCATGGCGGCTTTCGGGG GAGTCACGGCGGTGGCTCCCGGCGCGGTGACCGGTAA
Upstream 100 bases:
>100_bases GCCGCGCGCGGCACAGGTTTGCAGCCCTTGCACCCCGCGGTGAGGGTGTAAAGAACAAAAATTCCACTGAACTGTGGGAA ACGCCGCGTCTCTAACGCCT
Downstream 100 bases:
>100_bases TTTCCTGATTCCTCGTGGCTGAAAACGCGGGAGCAATACCGGGCCCGCCTGGGCTGGCGGTAGTGGTGTTGGCTGCCCCG GGATGGTCATCCCCCTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKQSMKGVAKRLTFSLVVVSALGGCAVYGPADPGPYAYGTYATGQPVYVAPPVYANPYPYPYVYPYPYYYDPLYIGPPVS FNFGFSSWSGHRSHDRGFRGGHGGFRGSHGGGSRRGDR
Sequences:
>Translated_118_residues MKQSMKGVAKRLTFSLVVVSALGGCAVYGPADPGPYAYGTYATGQPVYVAPPVYANPYPYPYVYPYPYYYDPLYIGPPVS FNFGFSSWSGHRSHDRGFRGGHGGFRGSHGGGSRRGDR >Mature_118_residues MKQSMKGVAKRLTFSLVVVSALGGCAVYGPADPGPYAYGTYATGQPVYVAPPVYANPYPYPYVYPYPYYYDPLYIGPPVS FNFGFSSWSGHRSHDRGFRGGHGGFRGSHGGGSRRGDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12828; Mature: 12828
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSMKGVAKRLTFSLVVVSALGGCAVYGPADPGPYAYGTYATGQPVYVAPPVYANPYPY CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC PYVYPYPYYYDPLYIGPPVSFNFGFSSWSGHRSHDRGFRGGHGGFRGSHGGGSRRGDR CEECCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQSMKGVAKRLTFSLVVVSALGGCAVYGPADPGPYAYGTYATGQPVYVAPPVYANPYPY CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC PYVYPYPYYYDPLYIGPPVSFNFGFSSWSGHRSHDRGFRGGHGGFRGSHGGGSRRGDR CEECCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA