The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787141

Identifier: 91787141

GI number: 91787141

Start: 1289748

End: 1290248

Strand: Direct

Name: 91787141

Synonym: Bpro_1244

Alternate gene names: NA

Gene position: 1289748-1290248 (Clockwise)

Preceding gene: 91787140

Following gene: 91787142

Centisome position: 24.8

GC content: 62.28

Gene sequence:

>501_bases
GTGCTGCAGCCAACACCAGCGTTTCGTTTCGCCACCTTGCCCGCGCAGGGCAGTCACGGTCAGGGGACTGTGCAGTGGCT
TCTCAAGCGTCACTGTTCTGTCACGCCGGCTCAACTCGGATGGCTTTATGTGTCGCTGTGCGTGATGTCGCTGGGTATCG
CAGCATTTTTCTGGGCACAGGGCGCCACGCTGGTCATGCCCTTCGCGTGGCTGGAGTTATTGGCGGTGGGGGCAGCTTTT
CTGGCGTATGCGCGCCATGCAACCGACGGTGAAAAAATCGTCCTGCAGGGTGAGCGGCTGGTGGTTGAGCTGGAAACGGC
AGGGCGTACGCAACGAGCCGAGTTCAATCGTGAGTGGGTTCGGATCGAGCCCAAGGATGGAGACGGTTCGCTGATTGAGG
TGTCCGGTCAGGGGCGGTCGGTGCGGGTGGGGCGGCATGTGCGGCCTGAATTGCGTCCCGCACTGGCCCGGGAGATACGC
TGCGCGCTGCGAAGTTGTTGA

Upstream 100 bases:

>100_bases
TTAAACCGGGCTACAATCCGAAACAGAATTTCTGGGTATGTTCCCGCGCCTCATGCGGCCAATGCGGCGTATTGGTTGCA
GTTTTTTGGGGGGTTGCCAC

Downstream 100 bases:

>100_bases
GTGTGCGCTGAAAATCTTGTGTCAGTACAGTTGCGGCAGGGTGACCTGCCGCTAACTTTATAATCGCCGGTTAATTTGGT
CGGATAGTTCGGTGAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQGATLVMPFAWLELLAVGAAF
LAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWVRIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIR
CALRSC

Sequences:

>Translated_166_residues
MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQGATLVMPFAWLELLAVGAAF
LAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWVRIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIR
CALRSC
>Mature_166_residues
MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQGATLVMPFAWLELLAVGAAF
LAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWVRIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIR
CALRSC

Specific function: Unknown

COG id: COG5488

COG function: function code S; Integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18354; Mature: 18354

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQ
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GATLVMPFAWLELLAVGAAFLAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWV
CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCCEE
RIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIRCALRSC
EEECCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQ
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GATLVMPFAWLELLAVGAAFLAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWV
CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCCEE
RIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIRCALRSC
EEECCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA