Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787141
Identifier: 91787141
GI number: 91787141
Start: 1289748
End: 1290248
Strand: Direct
Name: 91787141
Synonym: Bpro_1244
Alternate gene names: NA
Gene position: 1289748-1290248 (Clockwise)
Preceding gene: 91787140
Following gene: 91787142
Centisome position: 24.8
GC content: 62.28
Gene sequence:
>501_bases GTGCTGCAGCCAACACCAGCGTTTCGTTTCGCCACCTTGCCCGCGCAGGGCAGTCACGGTCAGGGGACTGTGCAGTGGCT TCTCAAGCGTCACTGTTCTGTCACGCCGGCTCAACTCGGATGGCTTTATGTGTCGCTGTGCGTGATGTCGCTGGGTATCG CAGCATTTTTCTGGGCACAGGGCGCCACGCTGGTCATGCCCTTCGCGTGGCTGGAGTTATTGGCGGTGGGGGCAGCTTTT CTGGCGTATGCGCGCCATGCAACCGACGGTGAAAAAATCGTCCTGCAGGGTGAGCGGCTGGTGGTTGAGCTGGAAACGGC AGGGCGTACGCAACGAGCCGAGTTCAATCGTGAGTGGGTTCGGATCGAGCCCAAGGATGGAGACGGTTCGCTGATTGAGG TGTCCGGTCAGGGGCGGTCGGTGCGGGTGGGGCGGCATGTGCGGCCTGAATTGCGTCCCGCACTGGCCCGGGAGATACGC TGCGCGCTGCGAAGTTGTTGA
Upstream 100 bases:
>100_bases TTAAACCGGGCTACAATCCGAAACAGAATTTCTGGGTATGTTCCCGCGCCTCATGCGGCCAATGCGGCGTATTGGTTGCA GTTTTTTGGGGGGTTGCCAC
Downstream 100 bases:
>100_bases GTGTGCGCTGAAAATCTTGTGTCAGTACAGTTGCGGCAGGGTGACCTGCCGCTAACTTTATAATCGCCGGTTAATTTGGT CGGATAGTTCGGTGAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Integral Membrane Protein-Like Protein
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQGATLVMPFAWLELLAVGAAF LAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWVRIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIR CALRSC
Sequences:
>Translated_166_residues MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQGATLVMPFAWLELLAVGAAF LAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWVRIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIR CALRSC >Mature_166_residues MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQGATLVMPFAWLELLAVGAAF LAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWVRIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIR CALRSC
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18354; Mature: 18354
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQ CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GATLVMPFAWLELLAVGAAFLAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWV CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCCEE RIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIRCALRSC EEECCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLQPTPAFRFATLPAQGSHGQGTVQWLLKRHCSVTPAQLGWLYVSLCVMSLGIAAFFWAQ CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GATLVMPFAWLELLAVGAAFLAYARHATDGEKIVLQGERLVVELETAGRTQRAEFNREWV CCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCCEE RIEPKDGDGSLIEVSGQGRSVRVGRHVRPELRPALAREIRCALRSC EEECCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA