Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yxiE [H]
Identifier: 91787094
GI number: 91787094
Start: 1239027
End: 1239482
Strand: Direct
Name: yxiE [H]
Synonym: Bpro_1197
Alternate gene names: 91787094
Gene position: 1239027-1239482 (Clockwise)
Preceding gene: 91787086
Following gene: 91787095
Centisome position: 23.83
GC content: 64.91
Gene sequence:
>456_bases ATGTACCACCGAATCCTCGTTCCCCTCGATGGCAGTGCTACGGCTGAGCGCGGCCTGCGCGAAGCCATCGGCCTGGCCGC CGAGCAAAAAGCACGGCTGTCCCTGCTGCACGTGGCGGACAATTTTCCGATGCTTGTGGAGATGTCGTCCGTGACCAGCT CCCAGGAAATGCTGAACGACCTTCGCCGGTACGGAGAAGACGTGCTCGCCAAAGCCAAGCGTGCTGCCGCCGATGCCGGT GTGCAGGCCGACACCCTGCTGCGCGAGGTGACGCAGGGGCGCATTGCCGATGTGATCATCGATGAAACCAAAAAGGCCGG TTGCGGCCTGATCGTGATGGGCACCCATGGCCGTCGCGGCTTCAGCCGCCTGACCCTGGGCAGCGAGGCCGAACGGGTGG TGCGCAGCAGCACGGTGCCCGTGTTGCTGGTGCGGCTGGACGAGCCGAAGTCGTGA
Upstream 100 bases:
>100_bases TATCTCAAGTGCACGCGTCCTTCCGGGATACAGAATTCACCCGTCCGCCCGGATGGCCGGCGGCGGGCACTCTCCTGGAC CGGCCTGTAAGGAACCCACT
Downstream 100 bases:
>100_bases GCCGGCGTCTCACAGGTTACATACCGGTCACACATACGCGCTACAGTGCTCCCTGGATACTGACAATTTGCGGCCGCTAT TGCGGCGCGGCCTCTGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MYHRILVPLDGSATAERGLREAIGLAAEQKARLSLLHVADNFPMLVEMSSVTSSQEMLNDLRRYGEDVLAKAKRAAADAG VQADTLLREVTQGRIADVIIDETKKAGCGLIVMGTHGRRGFSRLTLGSEAERVVRSSTVPVLLVRLDEPKS
Sequences:
>Translated_151_residues MYHRILVPLDGSATAERGLREAIGLAAEQKARLSLLHVADNFPMLVEMSSVTSSQEMLNDLRRYGEDVLAKAKRAAADAG VQADTLLREVTQGRIADVIIDETKKAGCGLIVMGTHGRRGFSRLTLGSEAERVVRSSTVPVLLVRLDEPKS >Mature_151_residues MYHRILVPLDGSATAERGLREAIGLAAEQKARLSLLHVADNFPMLVEMSSVTSSQEMLNDLRRYGEDVLAKAKRAAADAG VQADTLLREVTQGRIADVIIDETKKAGCGLIVMGTHGRRGFSRLTLGSEAERVVRSSTVPVLLVRLDEPKS
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16383; Mature: 16383
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHRILVPLDGSATAERGLREAIGLAAEQKARLSLLHVADNFPMLVEMSSVTSSQEMLND CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHCCCHHHHHHH LRRYGEDVLAKAKRAAADAGVQADTLLREVTQGRIADVIIDETKKAGCGLIVMGTHGRRG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCCCC FSRLTLGSEAERVVRSSTVPVLLVRLDEPKS CHHCCCCHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MYHRILVPLDGSATAERGLREAIGLAAEQKARLSLLHVADNFPMLVEMSSVTSSQEMLND CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEHHCCCHHHHHHH LRRYGEDVLAKAKRAAADAGVQADTLLREVTQGRIADVIIDETKKAGCGLIVMGTHGRRG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCCCC FSRLTLGSEAERVVRSSTVPVLLVRLDEPKS CHHCCCCHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]