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The map label for this gene is glcF [C]

Identifier: 91787085

GI number: 91787085

Start: 1227517

End: 1228890

Strand: Direct

Name: glcF [C]

Synonym: Bpro_1188

Alternate gene names: 91787085

Gene position: 1227517-1228890 (Clockwise)

Preceding gene: 91787084

Following gene: 91787086

Centisome position: 23.6

GC content: 66.38

Gene sequence:

>1374_bases
ATGATTGACATGCTCGTATTCAAGCAGTTCCAGGAGGCCATTGAGCATCTGGGCGAGATGGCCCAGCCCGAGCCCATCGC
GGACGAGGAGCGGGTGTCCCGGGCCAAAGCGGTCATGCGGCGCAAGACCGACCGGGGTCTGGCGCTCGACCTCGAGGCTT
GCGTCAATTGCGGCTACTGTTCCGAGGCCTGCCACTTTTACCAGTCCACGCAGGACCCGAAGTACACGCCGACCCGCAAG
CTGGACCTGCTGCGCCGCGTGCACGCGCGGGAAAGCTCGGCGTTCGCCCCCATCGTGCGCTGGTTCACGCGCGACATCAG
CCTGGAGGATCTGCAGGAATGGCAGGAACTCGTCTATGACTCCTGCGCCGAGTGTGGCCGTTGTAGCATGGTCTGCCCGA
TGGGCATCAACATTGCCCGCGGCGTCAACGTGATGCGCGAGGCGCTGTCCGAAGCGGGCCTGGCGCCGCTGGAACTGATG
GCGGTTGCCCAGGAGCAGGCCGGTCGCGGAACGGTGTTTGGGGTCGGACCGGCCGAACTGGCGCAGGTGGTCAAGGCGCT
GCGCGAGCAGGGTATCCGCGTGCCGCTCGACGAGCCACGGGCCGATGTGTTGCTGGTCACGACCGTGATCGACGTGCTGC
TGTTCCAGGACGCGTTGGCTGCGACCGCACGAATCCTCAATCATCTGGGTGTCGACTGGACGCTGCGCAGCGCCGGGTTC
GAGGCCGCCAACTTCGGGCTGCTGGCCGGCAACGAGGCCTTGCAGAAGGCGGCCAGCCAACGGCTCATTGACGAAGCGCT
GGTGATTGGCGCCAAGGTCCTGATCCTTCCGGAATGTGGCCACGCCTACCCGGCTCTGCGCTGGGAAGGGAAGTTGGCCG
ATGGAAAGCCACTGCCGTTCGAGGTGCTGGCGGCGGCCGAGTTCGTTGGACGCGAGATCCGCGGGGGGCGCCTCGCACTC
TCGCCCGGCGATTCGAACCGCAAGCTGACCTATCACGATGCCTGCAAGCTCGCGCGCCATGGCGGCGTGATCGACGAGCC
CCGCGTCGCGCTGCGCGCGCTGGGCGTCGATTTCCGCGAAACAACGCCCACGGCCGAGCTGAACTGGTGCTGTGGCGGGG
GAGCCGGGGCCTTCCTGATCAATCGTGCAGCGCCGCTGCGGCACAAGGCATGGGAAATCAAGCGGGCGCAAATCGATGCC
ACCGGCGCCGACACGGTCGTGGTGTCGTGCGCGAGTTGCCGCCTCAACTTCATGGAAGGCGCCGAAATCGGGCAGTCGCG
GATGCGCATTGAAAGCCTGGTCGAGCTCGTCGTCGCCCAATTGCCAGGACTACCGGCTACCGTGCGCGAGCCATCCCCCG
ACCCGGATGTGTGA

Upstream 100 bases:

>100_bases
TGCTGGCCTGGTTTCCGTTCGGCAAGCTGATGCATGCGTTCCTGGTTCTGCCTGCACGCATGCAACTGGCCACATTCCTC
GGCCGCCGCGGGGTGCCGCC

Downstream 100 bases:

>100_bases
GCTCCTCGCCATGTCGGGCCGGCGCTCGACGCAGTTGAACTTCTCGCTTCAGACGCTGGCTGCCCACAGCGCTGGCGGCA
GCACGACCCGCGACGGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: HMC operon ORF 6 [H]

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MIDMLVFKQFQEAIEHLGEMAQPEPIADEERVSRAKAVMRRKTDRGLALDLEACVNCGYCSEACHFYQSTQDPKYTPTRK
LDLLRRVHARESSAFAPIVRWFTRDISLEDLQEWQELVYDSCAECGRCSMVCPMGINIARGVNVMREALSEAGLAPLELM
AVAQEQAGRGTVFGVGPAELAQVVKALREQGIRVPLDEPRADVLLVTTVIDVLLFQDALAATARILNHLGVDWTLRSAGF
EAANFGLLAGNEALQKAASQRLIDEALVIGAKVLILPECGHAYPALRWEGKLADGKPLPFEVLAAAEFVGREIRGGRLAL
SPGDSNRKLTYHDACKLARHGGVIDEPRVALRALGVDFRETTPTAELNWCCGGGAGAFLINRAAPLRHKAWEIKRAQIDA
TGADTVVVSCASCRLNFMEGAEIGQSRMRIESLVELVVAQLPGLPATVREPSPDPDV

Sequences:

>Translated_457_residues
MIDMLVFKQFQEAIEHLGEMAQPEPIADEERVSRAKAVMRRKTDRGLALDLEACVNCGYCSEACHFYQSTQDPKYTPTRK
LDLLRRVHARESSAFAPIVRWFTRDISLEDLQEWQELVYDSCAECGRCSMVCPMGINIARGVNVMREALSEAGLAPLELM
AVAQEQAGRGTVFGVGPAELAQVVKALREQGIRVPLDEPRADVLLVTTVIDVLLFQDALAATARILNHLGVDWTLRSAGF
EAANFGLLAGNEALQKAASQRLIDEALVIGAKVLILPECGHAYPALRWEGKLADGKPLPFEVLAAAEFVGREIRGGRLAL
SPGDSNRKLTYHDACKLARHGGVIDEPRVALRALGVDFRETTPTAELNWCCGGGAGAFLINRAAPLRHKAWEIKRAQIDA
TGADTVVVSCASCRLNFMEGAEIGQSRMRIESLVELVVAQLPGLPATVREPSPDPDV
>Mature_457_residues
MIDMLVFKQFQEAIEHLGEMAQPEPIADEERVSRAKAVMRRKTDRGLALDLEACVNCGYCSEACHFYQSTQDPKYTPTRK
LDLLRRVHARESSAFAPIVRWFTRDISLEDLQEWQELVYDSCAECGRCSMVCPMGINIARGVNVMREALSEAGLAPLELM
AVAQEQAGRGTVFGVGPAELAQVVKALREQGIRVPLDEPRADVLLVTTVIDVLLFQDALAATARILNHLGVDWTLRSAGF
EAANFGLLAGNEALQKAASQRLIDEALVIGAKVLILPECGHAYPALRWEGKLADGKPLPFEVLAAAEFVGREIRGGRLAL
SPGDSNRKLTYHDACKLARHGGVIDEPRVALRALGVDFRETTPTAELNWCCGGGAGAFLINRAAPLRHKAWEIKRAQIDA
TGADTVVVSCASCRLNFMEGAEIGQSRMRIESLVELVVAQLPGLPATVREPSPDPDV

Specific function: HMWC (high-molecular-weight cytochrome c precursor), ORF2, ORF3, ORF4, ORF5, ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfa

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 49845; Mature: 49845

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDMLVFKQFQEAIEHLGEMAQPEPIADEERVSRAKAVMRRKTDRGLALDLEACVNCGYC
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCH
SEACHFYQSTQDPKYTPTRKLDLLRRVHARESSAFAPIVRWFTRDISLEDLQEWQELVYD
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
SCAECGRCSMVCPMGINIARGVNVMREALSEAGLAPLELMAVAQEQAGRGTVFGVGPAEL
HHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCHHHH
AQVVKALREQGIRVPLDEPRADVLLVTTVIDVLLFQDALAATARILNHLGVDWTLRSAGF
HHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
EAANFGLLAGNEALQKAASQRLIDEALVIGAKVLILPECGHAYPALRWEGKLADGKPLPF
CHHCCCEEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEECCCCCCCCCCCH
EVLAAAEFVGREIRGGRLALSPGDSNRKLTYHDACKLARHGGVIDEPRVALRALGVDFRE
HHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCHHC
TTPTAELNWCCGGGAGAFLINRAAPLRHKAWEIKRAQIDATGADTVVVSCASCRLNFMEG
CCCCCCEEEEECCCCCHHHEECCCCCHHHHHHHHHHEECCCCCCCEEEEHHHHHHHHHHH
AEIGQSRMRIESLVELVVAQLPGLPATVREPSPDPDV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDMLVFKQFQEAIEHLGEMAQPEPIADEERVSRAKAVMRRKTDRGLALDLEACVNCGYC
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCH
SEACHFYQSTQDPKYTPTRKLDLLRRVHARESSAFAPIVRWFTRDISLEDLQEWQELVYD
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
SCAECGRCSMVCPMGINIARGVNVMREALSEAGLAPLELMAVAQEQAGRGTVFGVGPAEL
HHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCHHHH
AQVVKALREQGIRVPLDEPRADVLLVTTVIDVLLFQDALAATARILNHLGVDWTLRSAGF
HHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
EAANFGLLAGNEALQKAASQRLIDEALVIGAKVLILPECGHAYPALRWEGKLADGKPLPF
CHHCCCEEECCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEECCCCCCCCCCCH
EVLAAAEFVGREIRGGRLALSPGDSNRKLTYHDACKLARHGGVIDEPRVALRALGVDFRE
HHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCHHC
TTPTAELNWCCGGGAGAFLINRAAPLRHKAWEIKRAQIDATGADTVVVSCASCRLNFMEG
CCCCCCEEEEECCCCCHHHEECCCCCHHHHHHHHHHEECCCCCCCEEEEHHHHHHHHHHH
AEIGQSRMRIESLVELVVAQLPGLPATVREPSPDPDV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]