Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787065
Identifier: 91787065
GI number: 91787065
Start: 1211080
End: 1211919
Strand: Direct
Name: 91787065
Synonym: Bpro_1168
Alternate gene names: NA
Gene position: 1211080-1211919 (Clockwise)
Preceding gene: 91787064
Following gene: 91787066
Centisome position: 23.29
GC content: 67.14
Gene sequence:
>840_bases ATGAAATCCTCCCTGATGCAAATACTGGTTCACTTTGATGCATCACGGCGCGCTGCGCCTCGCCTGGAGTTCGCACGCCA GCTTGCGCGGCGGCACGGTGCCGCGGTGGCCGCGCTCTATGCGGTCACACCCAGCTTCGTGATGCCGCCATTTGCGCCCA CCATCGGCCCCGGTGTCGCCGTCACCTTGCGCGAGCTTGACGACGAGCGGCTGGCCGGGGCGCGCGCCACCTTCGATCGT GCGCTGGCCTCGACCGGCGTACCGGTCTCCTGGGGCGAAGTGATCGACTACCCTGTGACGGGTGCCTTCGCCCAGCAGGC GCTGTATGCCGACCTGCTGGTGTTGGGCCAGCACGACCCTTCGGATATCGAGTCCTCGGACGTGCCGCCCGATTTCGCGG AAACCGCGATGGCGATCAGCGGCAGGCCGGCCCTGATCCTGCCCTACGCCGTGGTGCCGCCGACGGTCGGCGAGACGGTG GTGATTGCCTGGAAGACGACGCGCGAGGCGGCGCGTGCTGTCACCGCAGCCATGCCCCTGCTGCAGAGTGCGCAGCGTGT TCATGTGGTCAACTGGTCAGCCGATGAGCCTGTCGTCGGTGGCGTTTCGCTGGATCTGGCTGGCTATTTGAAGCGCCATG GCGTTGAGGCGACCTGGCACCGCCAGGGGGATGAGCCGGAAAGGCTGGGCGAGTTGCTGTTGTCAAGCGCCTTCGACCTG GAAGCCGACCTGCTGGTGATGGGCTGCTACGGCCATAGCCGGGCGCGCGAGTGGCTGCTGGGCGGCACCTCGCGGGCGGT TTTGCAGTCCATGACCCTGCCGGTGCTGATGGCGCACTGA
Upstream 100 bases:
>100_bases TGTCTCCCGGCCAGATGAGATTGGGTTGATGATTGTCAAGGGGTGGGGGAGCCCGGCGGATTAACGTAGACGGACTGCAA TCTCTCGATGGAGTGCTTCC
Downstream 100 bases:
>100_bases CCGCCAGCGCAACCCGCCCTTGGGTCACAGGGTTCCGGATGGCCACTCTGGGAACCCGGATTTGGGGAAAGCGTGCTTGG CACTCGGACGATTCCTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress UspA Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKSSLMQILVHFDASRRAAPRLEFARQLARRHGAAVAALYAVTPSFVMPPFAPTIGPGVAVTLRELDDERLAGARATFDR ALASTGVPVSWGEVIDYPVTGAFAQQALYADLLVLGQHDPSDIESSDVPPDFAETAMAISGRPALILPYAVVPPTVGETV VIAWKTTREAARAVTAAMPLLQSAQRVHVVNWSADEPVVGGVSLDLAGYLKRHGVEATWHRQGDEPERLGELLLSSAFDL EADLLVMGCYGHSRAREWLLGGTSRAVLQSMTLPVLMAH
Sequences:
>Translated_279_residues MKSSLMQILVHFDASRRAAPRLEFARQLARRHGAAVAALYAVTPSFVMPPFAPTIGPGVAVTLRELDDERLAGARATFDR ALASTGVPVSWGEVIDYPVTGAFAQQALYADLLVLGQHDPSDIESSDVPPDFAETAMAISGRPALILPYAVVPPTVGETV VIAWKTTREAARAVTAAMPLLQSAQRVHVVNWSADEPVVGGVSLDLAGYLKRHGVEATWHRQGDEPERLGELLLSSAFDL EADLLVMGCYGHSRAREWLLGGTSRAVLQSMTLPVLMAH >Mature_279_residues MKSSLMQILVHFDASRRAAPRLEFARQLARRHGAAVAALYAVTPSFVMPPFAPTIGPGVAVTLRELDDERLAGARATFDR ALASTGVPVSWGEVIDYPVTGAFAQQALYADLLVLGQHDPSDIESSDVPPDFAETAMAISGRPALILPYAVVPPTVGETV VIAWKTTREAARAVTAAMPLLQSAQRVHVVNWSADEPVVGGVSLDLAGYLKRHGVEATWHRQGDEPERLGELLLSSAFDL EADLLVMGCYGHSRAREWLLGGTSRAVLQSMTLPVLMAH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29968; Mature: 29968
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSLMQILVHFDASRRAAPRLEFARQLARRHGAAVAALYAVTPSFVMPPFAPTIGPGVA CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCE VTLRELDDERLAGARATFDRALASTGVPVSWGEVIDYPVTGAFAQQALYADLLVLGQHDP EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHEECCCCC SDIESSDVPPDFAETAMAISGRPALILPYAVVPPTVGETVVIAWKTTREAARAVTAAMPL CCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHH LQSAQRVHVVNWSADEPVVGGVSLDLAGYLKRHGVEATWHRQGDEPERLGELLLSSAFDL HHCCCEEEEEECCCCCCEECCEEHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCC EADLLVMGCYGHSRAREWLLGGTSRAVLQSMTLPVLMAH CCCEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCEECC >Mature Secondary Structure MKSSLMQILVHFDASRRAAPRLEFARQLARRHGAAVAALYAVTPSFVMPPFAPTIGPGVA CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCE VTLRELDDERLAGARATFDRALASTGVPVSWGEVIDYPVTGAFAQQALYADLLVLGQHDP EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHEECCCCC SDIESSDVPPDFAETAMAISGRPALILPYAVVPPTVGETVVIAWKTTREAARAVTAAMPL CCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHH LQSAQRVHVVNWSADEPVVGGVSLDLAGYLKRHGVEATWHRQGDEPERLGELLLSSAFDL HHCCCEEEEEECCCCCCEECCEEHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCC EADLLVMGCYGHSRAREWLLGGTSRAVLQSMTLPVLMAH CCCEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA