The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is engD [H]

Identifier: 91787025

GI number: 91787025

Start: 1165747

End: 1166838

Strand: Direct

Name: engD [H]

Synonym: Bpro_1127

Alternate gene names: 91787025

Gene position: 1165747-1166838 (Clockwise)

Preceding gene: 91787024

Following gene: 91787026

Centisome position: 22.42

GC content: 57.78

Gene sequence:

>1092_bases
ATGAGTTTGAAGTGCGGCATCGTAGGCTTGCCTAACGTCGGAAAATCCACCCTGTTCAATGCGTTGACCAAAGCGGGGAT
CGCGGCCGAAAACTACCCTTTTTGCACGATTGAGCCCAATGTGGGCATTGTGGAAGTGCCCGACGCACGTCTGGACGCAC
TCTCTGCCATCGTCAACCCGCAAAAGGTTCAACGTGCGATTGTCGAGTTTGTGGATATTGCCGGTTTGGTGGCCGGTGCC
AGCACCGGCGAGGGCCTGGGCAACAAGTTTCTGGCCCATATTCGTGAAACCGATGCCACGATCAATGTGGTGCGCTGCTT
TGAAGACGACAACGTGGTTCACGTGGCCGGCAAGGTGGACCCGATCTCCGACATTGAAGTGATCCAGACCGAGTTGTGCC
TGGCTGATCTCGCGGCGGTTGAAAAGGCCCTGCATCGGGTGACCAAGACCGCGCGCTCCGGCGACAAGGAGTCCGCCCGG
CTGGTGGCGATTCTGGAAAAATGCCAGGCAGCCTTGAATGAAGCCAAACCCGTGCGCACCCTGGAGTTCAGCAAGGAAGA
GCAACCCCTGCTGGCGCAGTTTTTCCTGATCACCGCCAAGCCCGCCATGTTTGTGGCCAACGTGGCTGAAGATGGTTTTG
AGAACAATCCTTTCCTGGATCGTCTGAAAGCCTACGCGGCCGAGCAAAAGGCGCCCGTGGTGGCAATCTGCGCGAAGATG
GAAGCCGAAATGGCCGACATGGAGGAAGAAGACAAAAAAATGTTCCTCGCTGAAATCGGCCAGGACGAGCCCGGGCTGAA
CCGCCTGATCATGGCCGCCTACAAGCTGCTGGGCCTGCAGACCTACTTCACGGCGGGCGTGAAGGAAGTGCGTGCCTGGA
CCATCCATGTTGGCGATACCGGCCCGCAAGCCGCCGGCGTGATTCACACCGATTTCGAGAAGGGCTACATCCGTGCCCAG
ACCATTGCATATGATGACTTCATCGCCTTCAAGGGTGAGCAGGGTGCCAAAGACGCCGGCAAGATGCGCAGTGAAGGCAA
GGACTACGTCGTCAAGGATGGCGACGTGATGAACTTCCTGTTCAGCAGCTGA

Upstream 100 bases:

>100_bases
AGCCTGCGCTGGGGCTAACACGCCCGGGCCCGATGAGGCGCCGGGAACGTCCGTTTCCGGGCATCGAATACACTTCTGGA
TCTGTTTTTGAAGGTTTGTC

Downstream 100 bases:

>100_bases
AACTGGCCGATTGCCGCCCGGCAGGAAATCGTTCAAGCCTCTTGCCATGGTCGTCGCGGAACGAGGGCCGAAAGCTGATT
TTTGATGGCCATCGGGCGCT

Product: GTP-dependent nucleic acid-binding protein EngD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNPQKVQRAIVEFVDIAGLVAGA
STGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVDPISDIEVIQTELCLADLAAVEKALHRVTKTARSGDKESAR
LVAILEKCQAALNEAKPVRTLEFSKEEQPLLAQFFLITAKPAMFVANVAEDGFENNPFLDRLKAYAAEQKAPVVAICAKM
EAEMADMEEEDKKMFLAEIGQDEPGLNRLIMAAYKLLGLQTYFTAGVKEVRAWTIHVGDTGPQAAGVIHTDFEKGYIRAQ
TIAYDDFIAFKGEQGAKDAGKMRSEGKDYVVKDGDVMNFLFSS

Sequences:

>Translated_363_residues
MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNPQKVQRAIVEFVDIAGLVAGA
STGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVDPISDIEVIQTELCLADLAAVEKALHRVTKTARSGDKESAR
LVAILEKCQAALNEAKPVRTLEFSKEEQPLLAQFFLITAKPAMFVANVAEDGFENNPFLDRLKAYAAEQKAPVVAICAKM
EAEMADMEEEDKKMFLAEIGQDEPGLNRLIMAAYKLLGLQTYFTAGVKEVRAWTIHVGDTGPQAAGVIHTDFEKGYIRAQ
TIAYDDFIAFKGEQGAKDAGKMRSEGKDYVVKDGDVMNFLFSS
>Mature_362_residues
SLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNPQKVQRAIVEFVDIAGLVAGAS
TGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVDPISDIEVIQTELCLADLAAVEKALHRVTKTARSGDKESARL
VAILEKCQAALNEAKPVRTLEFSKEEQPLLAQFFLITAKPAMFVANVAEDGFENNPFLDRLKAYAAEQKAPVVAICAKME
AEMADMEEEDKKMFLAEIGQDEPGLNRLIMAAYKLLGLQTYFTAGVKEVRAWTIHVGDTGPQAAGVIHTDFEKGYIRAQT
IAYDDFIAFKGEQGAKDAGKMRSEGKDYVVKDGDVMNFLFSS

Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]

COG id: COG0012

COG function: function code J; Predicted GTPase, probable translation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=41.7344173441734, Blast_Score=287, Evalue=9e-78,
Organism=Homo sapiens, GI58761502, Length=218, Percent_Identity=34.4036697247706, Blast_Score=135, Evalue=8e-32,
Organism=Escherichia coli, GI1787454, Length=362, Percent_Identity=64.0883977900553, Blast_Score=493, Evalue=1e-141,
Organism=Escherichia coli, GI1789574, Length=127, Percent_Identity=30.7086614173228, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17509631, Length=367, Percent_Identity=42.2343324250681, Blast_Score=289, Evalue=1e-78,
Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=38.3783783783784, Blast_Score=246, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6321773, Length=382, Percent_Identity=32.7225130890052, Blast_Score=195, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6321649, Length=179, Percent_Identity=36.8715083798883, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24640873, Length=368, Percent_Identity=39.945652173913, Blast_Score=277, Evalue=9e-75,
Organism=Drosophila melanogaster, GI24640877, Length=368, Percent_Identity=39.945652173913, Blast_Score=277, Evalue=9e-75,
Organism=Drosophila melanogaster, GI24640875, Length=368, Percent_Identity=39.945652173913, Blast_Score=277, Evalue=9e-75,
Organism=Drosophila melanogaster, GI24640879, Length=326, Percent_Identity=37.1165644171779, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24585318, Length=187, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR004396
- InterPro:   IPR013029
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR012676
- InterPro:   IPR023192 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]

EC number: NA

Molecular weight: Translated: 39349; Mature: 39217

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNP
CCCEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHCCH
QKVQRAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCC
PISDIEVIQTELCLADLAAVEKALHRVTKTARSGDKESARLVAILEKCQAALNEAKPVRT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEE
LEFSKEEQPLLAQFFLITAKPAMFVANVAEDGFENNPFLDRLKAYAAEQKAPVVAICAKM
EECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHH
EAEMADMEEEDKKMFLAEIGQDEPGLNRLIMAAYKLLGLQTYFTAGVKEVRAWTIHVGDT
HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
GPQAAGVIHTDFEKGYIRAQTIAYDDFIAFKGEQGAKDAGKMRSEGKDYVVKDGDVMNFL
CCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCCEEEECCCHHHHH
FSS
HCC
>Mature Secondary Structure 
SLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLDALSAIVNP
CCEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHCCH
QKVQRAIVEFVDIAGLVAGASTGEGLGNKFLAHIRETDATINVVRCFEDDNVVHVAGKVD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCC
PISDIEVIQTELCLADLAAVEKALHRVTKTARSGDKESARLVAILEKCQAALNEAKPVRT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEE
LEFSKEEQPLLAQFFLITAKPAMFVANVAEDGFENNPFLDRLKAYAAEQKAPVVAICAKM
EECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHH
EAEMADMEEEDKKMFLAEIGQDEPGLNRLIMAAYKLLGLQTYFTAGVKEVRAWTIHVGDT
HHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
GPQAAGVIHTDFEKGYIRAQTIAYDDFIAFKGEQGAKDAGKMRSEGKDYVVKDGDVMNFL
CCCCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHCCCCCEEEECCCHHHHH
FSS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]