Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786848
Identifier: 91786848
GI number: 91786848
Start: 967901
End: 968995
Strand: Direct
Name: 91786848
Synonym: Bpro_0946
Alternate gene names: NA
Gene position: 967901-968995 (Clockwise)
Preceding gene: 91786847
Following gene: 91786852
Centisome position: 18.61
GC content: 64.47
Gene sequence:
>1095_bases ATGAAGCCCCTCTACCTTGCCCTTTCGGGCGGAGGAATGCGCGCCATGGTCTTTCACTGCGGCGTGCTGAAATCCCTGGC GGAGCATGGGGCGCTGGAACACGTGAGCAAGGTCTCCACCGTGTCCGGCGGAAGCCTGCTGGTGGGCCTGCTCCTGCAGC TCAATGGCATGCGCTGGCCCACCAGCGATGAGTACCTCGAGGCGCTGTTGCCGAAGCTGAAGGACGTGCTGACACAGACA GACCTGCAAAAGGCCGCGATGCTGGCCATGCTGCGCCCGGCCAACTGGCGCTTTGCCCTGTCCCGCGCCAACGTGCTGGC TTCGGCCATTGGCAGCACCTGGGGTGTCGATGCCCTGCTCGATGAACTTCCCGCATCGCCGGTCTGGTCGATCAATGCCA CCACCGCTAAAACCGGCAAGCGCGCCTGCATTGAAGGCGGCCAGTTGCGCGACTGGACACTGGGGTCCACCCCAATGAAG CGATTTCCGCTGCGCGACGCCATGGCCGTGTCAGCGGCCTTCCCCGGGCTGATAGGCCCTTACGTCCTGCAAGCCGACAG CTTCGACTGGGACCTGCCGATGTATGCATCGGGCGATGAGGCCCGGCCGGCGGAAGACCGCTTCGCCAGAATTCATCTTT ACGACGGCGGTGTATACGACAACCTCGGGCTTGAGCCATTCTTTGATGCGGGTTTCGGCCCGAAGCCGAAAGTTGACGGC GTGATCATTTCGTCCGACGCAGGCGCGCCTCTGCCCAAAGGCTTCGATATGGGGCGGCTGAACCTGTTCCGGCTCAAGCG CGTGGCCGACATCATGTCTGACCAGACCCGGGCATTGCGCGCGAGAGGGCTGATGGCCTATGCGTCGAAAGCAAGCGGGC GCGCCGCTTATTTGCGGCTTGGCGCCACCGCCCAGGACATCGCCAGGCGCTCGGGCGCCGCATGCCCCGCCGGCCACTGG CTCGACAAGGAGCGCGTGAAGGCTGCAGCCGCGTACCCGACCTCGCTGAAAAAGGTGCCACTGCAGGCCTACGAGCTCCT TTTCAGGCACGGCTACGAATCCGCCGCCATCGGGCGTGCCGTGTTCGGGTTATGA
Upstream 100 bases:
>100_bases GCCTTGCAGGCTGCGGCTCGCGGGACGCTTCGCTGCGGCCTTTGACGCGCGGCCGCCGGTGCGATGACGTTCGCGCCACG GCAATGCGGCGGGTATGGGT
Downstream 100 bases:
>100_bases CAGGCTGCCTCAACCCTGCGCCAGCAACACCACCAGCGCCCCGGCGCCGCCTTCGGCCGGCCGGGCCTGCACGAAGGCCA GCACTTCCTGCTTCTGGATC
Product: patatin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKPLYLALSGGGMRAMVFHCGVLKSLAEHGALEHVSKVSTVSGGSLLVGLLLQLNGMRWPTSDEYLEALLPKLKDVLTQT DLQKAAMLAMLRPANWRFALSRANVLASAIGSTWGVDALLDELPASPVWSINATTAKTGKRACIEGGQLRDWTLGSTPMK RFPLRDAMAVSAAFPGLIGPYVLQADSFDWDLPMYASGDEARPAEDRFARIHLYDGGVYDNLGLEPFFDAGFGPKPKVDG VIISSDAGAPLPKGFDMGRLNLFRLKRVADIMSDQTRALRARGLMAYASKASGRAAYLRLGATAQDIARRSGAACPAGHW LDKERVKAAAAYPTSLKKVPLQAYELLFRHGYESAAIGRAVFGL
Sequences:
>Translated_364_residues MKPLYLALSGGGMRAMVFHCGVLKSLAEHGALEHVSKVSTVSGGSLLVGLLLQLNGMRWPTSDEYLEALLPKLKDVLTQT DLQKAAMLAMLRPANWRFALSRANVLASAIGSTWGVDALLDELPASPVWSINATTAKTGKRACIEGGQLRDWTLGSTPMK RFPLRDAMAVSAAFPGLIGPYVLQADSFDWDLPMYASGDEARPAEDRFARIHLYDGGVYDNLGLEPFFDAGFGPKPKVDG VIISSDAGAPLPKGFDMGRLNLFRLKRVADIMSDQTRALRARGLMAYASKASGRAAYLRLGATAQDIARRSGAACPAGHW LDKERVKAAAAYPTSLKKVPLQAYELLFRHGYESAAIGRAVFGL >Mature_364_residues MKPLYLALSGGGMRAMVFHCGVLKSLAEHGALEHVSKVSTVSGGSLLVGLLLQLNGMRWPTSDEYLEALLPKLKDVLTQT DLQKAAMLAMLRPANWRFALSRANVLASAIGSTWGVDALLDELPASPVWSINATTAKTGKRACIEGGQLRDWTLGSTPMK RFPLRDAMAVSAAFPGLIGPYVLQADSFDWDLPMYASGDEARPAEDRFARIHLYDGGVYDNLGLEPFFDAGFGPKPKVDG VIISSDAGAPLPKGFDMGRLNLFRLKRVADIMSDQTRALRARGLMAYASKASGRAAYLRLGATAQDIARRSGAACPAGHW LDKERVKAAAAYPTSLKKVPLQAYELLFRHGYESAAIGRAVFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39226; Mature: 39226
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLYLALSGGGMRAMVFHCGVLKSLAEHGALEHVSKVSTVSGGSLLVGLLLQLNGMRWP CCCEEEEECCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC TSDEYLEALLPKLKDVLTQTDLQKAAMLAMLRPANWRFALSRANVLASAIGSTWGVDALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHH DELPASPVWSINATTAKTGKRACIEGGQLRDWTLGSTPMKRFPLRDAMAVSAAFPGLIGP HHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCHHCC YVLQADSFDWDLPMYASGDEARPAEDRFARIHLYDGGVYDNLGLEPFFDAGFGPKPKVDG CEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCE VIISSDAGAPLPKGFDMGRLNLFRLKRVADIMSDQTRALRARGLMAYASKASGRAAYLRL EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE GATAQDIARRSGAACPAGHWLDKERVKAAAAYPTSLKKVPLQAYELLFRHGYESAAIGRA CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCHHHHHHH VFGL HHCC >Mature Secondary Structure MKPLYLALSGGGMRAMVFHCGVLKSLAEHGALEHVSKVSTVSGGSLLVGLLLQLNGMRWP CCCEEEEECCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC TSDEYLEALLPKLKDVLTQTDLQKAAMLAMLRPANWRFALSRANVLASAIGSTWGVDALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHH DELPASPVWSINATTAKTGKRACIEGGQLRDWTLGSTPMKRFPLRDAMAVSAAFPGLIGP HHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCHHCC YVLQADSFDWDLPMYASGDEARPAEDRFARIHLYDGGVYDNLGLEPFFDAGFGPKPKVDG CEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCE VIISSDAGAPLPKGFDMGRLNLFRLKRVADIMSDQTRALRARGLMAYASKASGRAAYLRL EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE GATAQDIARRSGAACPAGHWLDKERVKAAAAYPTSLKKVPLQAYELLFRHGYESAAIGRA CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCHHHHHHH VFGL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA