The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is osmY [C]

Identifier: 91786776

GI number: 91786776

Start: 897253

End: 897744

Strand: Direct

Name: osmY [C]

Synonym: Bpro_0874

Alternate gene names: 91786776

Gene position: 897253-897744 (Clockwise)

Preceding gene: 91786775

Following gene: 91786783

Centisome position: 17.25

GC content: 58.54

Gene sequence:

>492_bases
ATGAAAGAAACACCTTCCGATCATTGCAAGCCCCGGGTGAGGCTGACAGGCAGTTTGCTGGTCCTTCTTTTCGCCTTGAG
TGCTTGCGGCAAGCAAGATGATGGCAAAACGGCCGGCCAGCAGCTGGACACCGCCATTGCGAAAACCGAACAGGCCGCCG
AGAAAGCGAAAGCCAAGACCGAAAGTGCCATGGCCAATGCCGGTGTGGCGATGAAAGATGCGACCCGGGAGGTTGAAGCC
TCCGGCAAGCAGATAGCGGACAAGGCCGGGGAAAAGATCAACGACGTGACCATCACCGCCGCAGTGTCGTCCGGGCTTGC
CAGGGATCCCGAGCTGAGCGCCCTGAAAATCAATGTGGATACCAAAAATGGCGCTGTCACCTTGACGGGCTCTGCCCCTA
CCGAAGCTGCGCGCGAGAGAGCCGGCACCCTTGCCAAAACTGTCAAAGGTGTGAATTCGGTCGAGAACCGGCTCACCGTG
AAGGCGGGTTAA

Upstream 100 bases:

>100_bases
CGGCTCAGGATCGTCGCCTGCTGTGTGGTCCGGCCCCACTTGCTCGTTGAGCGTGCCTGGTGCCTATTTCACGACGACAG
GATCACGAACAGGAGTACTC

Downstream 100 bases:

>100_bases
CAGAGAAACGCTGCCGCATGACCTCCACCGGCCAGGTGCAGGTGGAAGCAGGCGGAAAAAGCAGACGATGAAAACTCCAC
CGTCTGCCTTCGGTTGACCC

Product: transport protein

Products: NA

Alternate protein names: Transport-Associated Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKTESAMANAGVAMKDATREVEA
SGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVDTKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTV
KAG

Sequences:

>Translated_163_residues
MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKTESAMANAGVAMKDATREVEA
SGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVDTKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTV
KAG
>Mature_163_residues
MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKTESAMANAGVAMKDATREVEA
SGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVDTKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTV
KAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16791; Mature: 16791

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKT
CCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ESAMANAGVAMKDATREVEASGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVD
HHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEE
TKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTVKAG
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MKETPSDHCKPRVRLTGSLLVLLFALSACGKQDDGKTAGQQLDTAIAKTEQAAEKAKAKT
CCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ESAMANAGVAMKDATREVEASGKQIADKAGEKINDVTITAAVSSGLARDPELSALKINVD
HHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEE
TKNGAVTLTGSAPTEAARERAGTLAKTVKGVNSVENRLTVKAG
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA