Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786754
Identifier: 91786754
GI number: 91786754
Start: 873338
End: 873706
Strand: Direct
Name: 91786754
Synonym: Bpro_0852
Alternate gene names: NA
Gene position: 873338-873706 (Clockwise)
Preceding gene: 91786749
Following gene: 91786760
Centisome position: 16.79
GC content: 59.62
Gene sequence:
>369_bases TTGGCCTGGATCAAACACCCTCAACCGTCTTTCTCGGGCCGCTTGCAGGGTGTGCCCCGTGACCCCACAACCGCTGCCAT GACCGCTTACCTGCTGACCAACCACCTGCTCAATTTCATGGCGCCTGCTGCGCTTGTTGCCATGCTGCTGGTGCTGTTGT CCCGCCTCTTGTCCCGATTCTTCACCTCAAAAAAGCCGCTGGTCCCCACATTCTGGCGGCAGGTAGCTATTGTTTTCATA GCAAATACGGCCGTTTTGACGGCCGGGCTGCTGGTTTTCGGCCATGACGGAAAGATGCTGACCTATGCCGGGCTCGTGGT GGTCGCGGCGCTGTGCCAGTGGGTGTTGTTGCGGGGGTGGAAGGCGTGA
Upstream 100 bases:
>100_bases GCGAATCGCCCGCGCAAATCGAGCGGTGCGGTGGTATGGTTTAGCCCCAGGGCCCAGACTGACATTCCCCGATTATAAAA TTGAAGTGCGGGACAGGCAT
Downstream 100 bases:
>100_bases GGGGCCTGGTGCCCCGTCTGCATCCCGTTGAGTGCTTGGGGCCGGACGAGGCGGCTTGAACGTCGTTGATCAAACCGGCC GGAAGGCATCCACCCGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAWIKHPQPSFSGRLQGVPRDPTTAAMTAYLLTNHLLNFMAPAALVAMLLVLLSRLLSRFFTSKKPLVPTFWRQVAIVFI ANTAVLTAGLLVFGHDGKMLTYAGLVVVAALCQWVLLRGWKA
Sequences:
>Translated_122_residues MAWIKHPQPSFSGRLQGVPRDPTTAAMTAYLLTNHLLNFMAPAALVAMLLVLLSRLLSRFFTSKKPLVPTFWRQVAIVFI ANTAVLTAGLLVFGHDGKMLTYAGLVVVAALCQWVLLRGWKA >Mature_121_residues AWIKHPQPSFSGRLQGVPRDPTTAAMTAYLLTNHLLNFMAPAALVAMLLVLLSRLLSRFFTSKKPLVPTFWRQVAIVFIA NTAVLTAGLLVFGHDGKMLTYAGLVVVAALCQWVLLRGWKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13420; Mature: 13289
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWIKHPQPSFSGRLQGVPRDPTTAAMTAYLLTNHLLNFMAPAALVAMLLVLLSRLLSRF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSKKPLVPTFWRQVAIVFIANTAVLTAGLLVFGHDGKMLTYAGLVVVAALCQWVLLRGW HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC KA CC >Mature Secondary Structure AWIKHPQPSFSGRLQGVPRDPTTAAMTAYLLTNHLLNFMAPAALVAMLLVLLSRLLSRF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTSKKPLVPTFWRQVAIVFIANTAVLTAGLLVFGHDGKMLTYAGLVVVAALCQWVLLRGW HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC KA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA