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The map label for this gene is sspB [H]

Identifier: 91786727

GI number: 91786727

Start: 847239

End: 847796

Strand: Direct

Name: sspB [H]

Synonym: Bpro_0825

Alternate gene names: 91786727

Gene position: 847239-847796 (Clockwise)

Preceding gene: 91786726

Following gene: 91786729

Centisome position: 16.29

GC content: 61.11

Gene sequence:

>558_bases
ATGAACGCACCGGATTCTTCGTCGACCCGCCCGTACCTGATACGGGCCCTGTACGAATGGTGTACCGACAACGGCCTCAC
GCCCTATGTGGCGGTGGCGGTGGACGAAACCGTGCAGGTACCGCGCGAGTACGTCAAGAACAATGAGATCGTGCTCAACA
TCAGCTTTGATGCGACCAGCTCGCTCAAACTGGGCAATGACTTTATCGAATTCAAGGCGCGTTTTGCCGGCAGCGCCCGC
GAGATCATCGTTCCTATCACCCATGTGATTGCCATCTATGCCCGTGAAAATGGGCAGGGCATGGCGTTTCCCATGGTGGC
ATCTCCACCGGCATCGTCGGCAGGTCCTGCGGGTGGTGTGGAGGCTGCTGCAGCTGTGACTGACATGTCTGCTCCGGCCG
ATGCATCAGGGTTGGCAGGCGCGGGTGAGGGGGTGGACAGCAAGATCATGCAACTGGTCCCCGACAGTGTGCCCGAGGCT
GGCGATCCCGGCCCTGATTCCCCCGAGCCCCCGAAGTCACCGCCGCGCACGCGTCCGTCACTCAAGCGCGTCAAGTAA

Upstream 100 bases:

>100_bases
CTGCGCCTGCGGCCCGGCAAAGCCGGTTCCGCGGCCCTTGCTAGTGAGGACGGCGCCGTTTTGAATACCGCGCGGGTCCA
GATCTAAGTTGGCTGATCTG

Downstream 100 bases:

>100_bases
AATAGTTTTGTGCCGCTTTAGCTCAGTTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTCAGTTCGATTCCGACAAGC
GGCACCATTTCTCAGCGCAT

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MNAPDSSSTRPYLIRALYEWCTDNGLTPYVAVAVDETVQVPREYVKNNEIVLNISFDATSSLKLGNDFIEFKARFAGSAR
EIIVPITHVIAIYARENGQGMAFPMVASPPASSAGPAGGVEAAAAVTDMSAPADASGLAGAGEGVDSKIMQLVPDSVPEA
GDPGPDSPEPPKSPPRTRPSLKRVK

Sequences:

>Translated_185_residues
MNAPDSSSTRPYLIRALYEWCTDNGLTPYVAVAVDETVQVPREYVKNNEIVLNISFDATSSLKLGNDFIEFKARFAGSAR
EIIVPITHVIAIYARENGQGMAFPMVASPPASSAGPAGGVEAAAAVTDMSAPADASGLAGAGEGVDSKIMQLVPDSVPEA
GDPGPDSPEPPKSPPRTRPSLKRVK
>Mature_185_residues
MNAPDSSSTRPYLIRALYEWCTDNGLTPYVAVAVDETVQVPREYVKNNEIVLNISFDATSSLKLGNDFIEFKARFAGSAR
EIIVPITHVIAIYARENGQGMAFPMVASPPASSAGPAGGVEAAAAVTDMSAPADASGLAGAGEGVDSKIMQLVPDSVPEA
GDPGPDSPEPPKSPPRTRPSLKRVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=104, Percent_Identity=50, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 19368; Mature: 19368

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPDSSSTRPYLIRALYEWCTDNGLTPYVAVAVDETVQVPREYVKNNEIVLNISFDATS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCEEEEEECCCCC
SLKLGNDFIEFKARFAGSAREIIVPITHVIAIYARENGQGMAFPMVASPPASSAGPAGGV
CCCCCCHHHHHHHHHCCCCCEEHEEHHHEEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
EAAAAVTDMSAPADASGLAGAGEGVDSKIMQLVPDSVPEAGDPGPDSPEPPKSPPRTRPS
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LKRVK
CCCCC
>Mature Secondary Structure
MNAPDSSSTRPYLIRALYEWCTDNGLTPYVAVAVDETVQVPREYVKNNEIVLNISFDATS
CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCEEEEEECCCCC
SLKLGNDFIEFKARFAGSAREIIVPITHVIAIYARENGQGMAFPMVASPPASSAGPAGGV
CCCCCCHHHHHHHHHCCCCCEEHEEHHHEEEEEECCCCCCEEEEEEECCCCCCCCCCCCC
EAAAAVTDMSAPADASGLAGAGEGVDSKIMQLVPDSVPEAGDPGPDSPEPPKSPPRTRPS
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LKRVK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]