| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is estA [H]
Identifier: 91786658
GI number: 91786658
Start: 774486
End: 776429
Strand: Direct
Name: estA [H]
Synonym: Bpro_0756
Alternate gene names: 91786658
Gene position: 774486-776429 (Clockwise)
Preceding gene: 91786657
Following gene: 91786663
Centisome position: 14.89
GC content: 63.89
Gene sequence:
>1944_bases ATGACGCTCAATTACTCTTTCTCATACTTCATGCAAAAACCAATCCGCTACAGCCTGACCGCCGCTGCCTGCCTTCTGGC CTTTTCGGCCCAGGCCCAGCTCATCAGCAATCTCTACTCTGTCGGCGACAGCCTGACCGATGCCGGCACCTATGCGCCGA CCACGCAATTGTTCGTACCCGATTCCGGCCGCTTCACCACCAACCCTGGCCTGGTCTGGACGCAGTACCTGGGCCAGTCG CTGGGGCTTTCCAGCGAGGCGGCGATCGTCAATCAATTTGGCGCACCGACCCGGACGCCCAACGGCGGAACCAACTATGC GCAGGGCGGTTCGCGCGTCTTGCTGAGCCCTGGCGTGGGAGTCGGTGCCGGCGTCTGGTTTACGGCCGACCCGGTCAGCA GCCAGGTTGACCGCCTGCTGGCCGACACCGGCGGCCGCATTGACGGCAAAGCCCTGGTCACGGTCTGGGCGGGAGCCAAC GACGTACTTACCCAATATGGCGCGGTGGGCTTGGGCTTGCCGGTGCCCTCGGCGCTGGGCAATGTCGGCACCTCGGCCGG CGACCTCAACGCCCAGATCATGCGCCTGCAGGCGGCGGGGGCCAAACTGATCCTCGTCAACACACTGCCGGATCTGGGTG TCACGCCATTCGGACTTTCTCAAGGGCCGGCGGGCGCCGGCTTGCTGACGGCGATGTCTGACACCTTCAACCAGCAACTG CTACAGGCCACCGCCGGGCGCAATGTGCTGGTGTTTGACACCAACAGGGTGCTCAACGATCTGCGGGCGCGGCCGGCTGC ATACGGCTTTACCGCACTGAATGCGGCGACCCAGCCGGCCTGCCTGCCGTCCGGCAGCTCATCGCTCCTGTGCGTCAATC CCCCGGAGGCCGATACCTATGTGTTCGCCGATGGGGTGCATCCGACCTCGGCAACGCACAAGGTCTTTGCCCAGGTGACG CTGGCAAGCATGCGTGCCGCAGGCCAGAACAGCACGCTGGCGGTCGCGCCCCTGGTGGCCATCCGGCAGCATGCGCAAAC GCTGGAAGGGCGCCTGACATCGGGTGCGCTGGTGGTCGAGCAGCCCGATGACAGCAAAATCGTGCTTCGTCCAAAGGGTC ATCTTGAGATGTACACCGCGCTGGAGAGCGGCCGCTTTGGTGCTTCGACGCTGGGCGTGCGCATGGGCAACGAAGCCAAA ACCACCGTGGTGCTGGTCGGCGGCGACATCACGCTGGCGCCCAATGCACTGGCCGGGCTGGTGCTGTCGCATGCGGAGGG CGATTTGTCATTCTCCGAAAACACCGGCGGCTTCAAGACCCGGCAGACCACCGTCGGTACCTATGCTACCGTGGCCCTGT CGCCCGAGTGGTACCTGAATGCGGCGCTGGCTTACGGCGACCTTGACTTTGACAACATTCACCGCGATGTGCGGCTGGGA TCCACGCAGTTGCTGGTGTCCTCGACGGGACAAACCACCGGCAGCTATGCGTCAGCGCGCGTGGGCGGCGGCTACATCTT GAAGGCGGGCCGGTTCTTTGGCGGTCCCACGCTGTCGCTGACCGAAGAGCGCGTGAAGGTGAAGGCTTACACCGAAGCGC CCGGCCCGCTGGCCTTCAGCTTTGGCGATACCACATACAGGTCACGACGCGTGTCACTGGGTTTCAATGGCACTTACGAC GTGGGGCGCATCAAACCCTTTGCCCGTGTGAGCCTGGAAAAAGACCTGAACCATGACCCCTTGCGCGTGACGATGGGCAG CTATGCGAGCAACGCCATCACCGTCGATGGCGACAGGCCGGATGGCTTGTTTGCGCTGGCAACGCTGGGCGTCAAGGGCC TGCTGGGCGGTGGCATGCAATGGAGCCTGCTGTACAGCACCACTGTGTCGCAAAACGACATCCGCGGCTGGTCGGTGGGC GCAGCCCTGCAAGTACCTTTTTAA
Upstream 100 bases:
>100_bases GCGACCGGATAGCGATTCAATCCAGTCCTTTTGCAACCCACTTTTGCAATTTTTTTATTGCAATCCTTTATTGCAATCCT TTTGTGCAGTCCTTGTGATC
Downstream 100 bases:
>100_bases CCAGACCCCGAAGTTCTGCGCACGGACGCTGACCCGTCCTGCCATAGGTTGACACCTATGAAACACAAATAGCTGAGCCG TGAAGGCCAGCCAGAGACGC
Product: Outer membrane autotransporter barrel domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 647; Mature: 646
Protein sequence:
>647_residues MTLNYSFSYFMQKPIRYSLTAAACLLAFSAQAQLISNLYSVGDSLTDAGTYAPTTQLFVPDSGRFTTNPGLVWTQYLGQS LGLSSEAAIVNQFGAPTRTPNGGTNYAQGGSRVLLSPGVGVGAGVWFTADPVSSQVDRLLADTGGRIDGKALVTVWAGAN DVLTQYGAVGLGLPVPSALGNVGTSAGDLNAQIMRLQAAGAKLILVNTLPDLGVTPFGLSQGPAGAGLLTAMSDTFNQQL LQATAGRNVLVFDTNRVLNDLRARPAAYGFTALNAATQPACLPSGSSSLLCVNPPEADTYVFADGVHPTSATHKVFAQVT LASMRAAGQNSTLAVAPLVAIRQHAQTLEGRLTSGALVVEQPDDSKIVLRPKGHLEMYTALESGRFGASTLGVRMGNEAK TTVVLVGGDITLAPNALAGLVLSHAEGDLSFSENTGGFKTRQTTVGTYATVALSPEWYLNAALAYGDLDFDNIHRDVRLG STQLLVSSTGQTTGSYASARVGGGYILKAGRFFGGPTLSLTEERVKVKAYTEAPGPLAFSFGDTTYRSRRVSLGFNGTYD VGRIKPFARVSLEKDLNHDPLRVTMGSYASNAITVDGDRPDGLFALATLGVKGLLGGGMQWSLLYSTTVSQNDIRGWSVG AALQVPF
Sequences:
>Translated_647_residues MTLNYSFSYFMQKPIRYSLTAAACLLAFSAQAQLISNLYSVGDSLTDAGTYAPTTQLFVPDSGRFTTNPGLVWTQYLGQS LGLSSEAAIVNQFGAPTRTPNGGTNYAQGGSRVLLSPGVGVGAGVWFTADPVSSQVDRLLADTGGRIDGKALVTVWAGAN DVLTQYGAVGLGLPVPSALGNVGTSAGDLNAQIMRLQAAGAKLILVNTLPDLGVTPFGLSQGPAGAGLLTAMSDTFNQQL LQATAGRNVLVFDTNRVLNDLRARPAAYGFTALNAATQPACLPSGSSSLLCVNPPEADTYVFADGVHPTSATHKVFAQVT LASMRAAGQNSTLAVAPLVAIRQHAQTLEGRLTSGALVVEQPDDSKIVLRPKGHLEMYTALESGRFGASTLGVRMGNEAK TTVVLVGGDITLAPNALAGLVLSHAEGDLSFSENTGGFKTRQTTVGTYATVALSPEWYLNAALAYGDLDFDNIHRDVRLG STQLLVSSTGQTTGSYASARVGGGYILKAGRFFGGPTLSLTEERVKVKAYTEAPGPLAFSFGDTTYRSRRVSLGFNGTYD VGRIKPFARVSLEKDLNHDPLRVTMGSYASNAITVDGDRPDGLFALATLGVKGLLGGGMQWSLLYSTTVSQNDIRGWSVG AALQVPF >Mature_646_residues TLNYSFSYFMQKPIRYSLTAAACLLAFSAQAQLISNLYSVGDSLTDAGTYAPTTQLFVPDSGRFTTNPGLVWTQYLGQSL GLSSEAAIVNQFGAPTRTPNGGTNYAQGGSRVLLSPGVGVGAGVWFTADPVSSQVDRLLADTGGRIDGKALVTVWAGAND VLTQYGAVGLGLPVPSALGNVGTSAGDLNAQIMRLQAAGAKLILVNTLPDLGVTPFGLSQGPAGAGLLTAMSDTFNQQLL QATAGRNVLVFDTNRVLNDLRARPAAYGFTALNAATQPACLPSGSSSLLCVNPPEADTYVFADGVHPTSATHKVFAQVTL ASMRAAGQNSTLAVAPLVAIRQHAQTLEGRLTSGALVVEQPDDSKIVLRPKGHLEMYTALESGRFGASTLGVRMGNEAKT TVVLVGGDITLAPNALAGLVLSHAEGDLSFSENTGGFKTRQTTVGTYATVALSPEWYLNAALAYGDLDFDNIHRDVRLGS TQLLVSSTGQTTGSYASARVGGGYILKAGRFFGGPTLSLTEERVKVKAYTEAPGPLAFSFGDTTYRSRRVSLGFNGTYDV GRIKPFARVSLEKDLNHDPLRVTMGSYASNAITVDGDRPDGLFALATLGVKGLLGGGMQWSLLYSTTVSQNDIRGWSVGA ALQVPF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 67591; Mature: 67460
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNYSFSYFMQKPIRYSLTAAACLLAFSAQAQLISNLYSVGDSLTDAGTYAPTTQLFVP CEEECEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC DSGRFTTNPGLVWTQYLGQSLGLSSEAAIVNQFGAPTRTPNGGTNYAQGGSRVLLSPGVG CCCCEECCCCEEEHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC VGAGVWFTADPVSSQVDRLLADTGGRIDGKALVTVWAGANDVLTQYGAVGLGLPVPSALG CCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCCCEEECCCCCHHHH NVGTSAGDLNAQIMRLQAAGAKLILVNTLPDLGVTPFGLSQGPAGAGLLTAMSDTFNQQL CCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LQATAGRNVLVFDTNRVLNDLRARPAAYGFTALNAATQPACLPSGSSSLLCVNPPEADTY HHHHCCCEEEEEECHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCEE VFADGVHPTSATHKVFAQVTLASMRAAGQNSTLAVAPLVAIRQHAQTLEGRLTSGALVVE EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEE QPDDSKIVLRPKGHLEMYTALESGRFGASTLGVRMGNEAKTTVVLVGGDITLAPNALAGL CCCCCEEEECCCCCEEEEEEHHCCCCCCCEEEEEECCCCCEEEEEECCCEEECCHHHHHH VLSHAEGDLSFSENTGGFKTRQTTVGTYATVALSPEWYLNAALAYGDLDFDNIHRDVRLG HEECCCCCCEECCCCCCCEEEEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHHEECC STQLLVSSTGQTTGSYASARVGGGYILKAGRFFGGPTLSLTEERVKVKAYTEAPGPLAFS CEEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCCCEEEECCEEEEEEEECCCCCEEEE FGDTTYRSRRVSLGFNGTYDVGRIKPFARVSLEKDLNHDPLRVTMGSYASNAITVDGDRP CCCCCCCCEEEEECCCCCCCCCCCCHHHEEEEHHCCCCCCEEEEECCCCCCEEEECCCCC DGLFALATLGVKGLLGGGMQWSLLYSTTVSQNDIRGWSVGAALQVPF CCEEEEEHHCHHHHHCCCEEEEEEEEEECCCCCCCCEECCCEEECCC >Mature Secondary Structure TLNYSFSYFMQKPIRYSLTAAACLLAFSAQAQLISNLYSVGDSLTDAGTYAPTTQLFVP EEECEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC DSGRFTTNPGLVWTQYLGQSLGLSSEAAIVNQFGAPTRTPNGGTNYAQGGSRVLLSPGVG CCCCEECCCCEEEHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC VGAGVWFTADPVSSQVDRLLADTGGRIDGKALVTVWAGANDVLTQYGAVGLGLPVPSALG CCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCCCEEECCCCCHHHH NVGTSAGDLNAQIMRLQAAGAKLILVNTLPDLGVTPFGLSQGPAGAGLLTAMSDTFNQQL CCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LQATAGRNVLVFDTNRVLNDLRARPAAYGFTALNAATQPACLPSGSSSLLCVNPPEADTY HHHHCCCEEEEEECHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCEE VFADGVHPTSATHKVFAQVTLASMRAAGQNSTLAVAPLVAIRQHAQTLEGRLTSGALVVE EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEE QPDDSKIVLRPKGHLEMYTALESGRFGASTLGVRMGNEAKTTVVLVGGDITLAPNALAGL CCCCCEEEECCCCCEEEEEEHHCCCCCCCEEEEEECCCCCEEEEEECCCEEECCHHHHHH VLSHAEGDLSFSENTGGFKTRQTTVGTYATVALSPEWYLNAALAYGDLDFDNIHRDVRLG HEECCCCCCEECCCCCCCEEEEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHHEECC STQLLVSSTGQTTGSYASARVGGGYILKAGRFFGGPTLSLTEERVKVKAYTEAPGPLAFS CEEEEEEECCCCCCCCCEEECCCEEEEEECCCCCCCCEEEECCEEEEEEEECCCCCEEEE FGDTTYRSRRVSLGFNGTYDVGRIKPFARVSLEKDLNHDPLRVTMGSYASNAITVDGDRP CCCCCCCCEEEEECCCCCCCCCCCCHHHEEEEHHCCCCCCEEEEECCCCCCEEEECCCCC DGLFALATLGVKGLLGGGMQWSLLYSTTVSQNDIRGWSVGAALQVPF CCEEEEEHHCHHHHHCCCEEEEEEEEEECCCCCCCCEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]