| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
Click here to switch to the map view.
The map label for this gene is nlp [H]
Identifier: 91212611
GI number: 91212611
Start: 3554587
End: 3554865
Strand: Direct
Name: nlp [H]
Synonym: UTI89_C3622
Alternate gene names: 91212611
Gene position: 3554587-3554865 (Clockwise)
Preceding gene: 91212610
Following gene: 91212614
Centisome position: 70.17
GC content: 49.46
Gene sequence:
>279_bases ATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCAGGTTTGCGCAAGAAGGAAACGTCAATGGCGGCGGA GTCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAACGCATTATCACGCCCATGGCCGAAAGGAGAGATGATTATTG CGAAAGCCCTGGGAACTGACCCCTGGGTTATCTGGCCATCACGCTACCATGATCCGCAGACCCATGAGTTTATCGACAGA ACGCAATTGATGCGTAGCTACACTAAACCGAAAAAATGA
Upstream 100 bases:
>100_bases GAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAACAGAAGAAGTGTTCTGAATGAAAGCGACT AACTTAAGGAGTGAGGAAAG
Downstream 100 bases:
>100_bases GTGGTCTGGCGGTAGCCCCGCGAACGGGGCTGCCAGCTCTCAGACAATTACTCGCCTTTCACACGCTCAATATTTGCACC TAAAGCGCGTAGTTTGTCTT
Product: DNA-binding transcriptional regulator Nlp
Products: NA
Alternate protein names: Ner-like protein [H]
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MESNFIDWHPADIIAGLRKKETSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDR TQLMRSYTKPKK
Sequences:
>Translated_92_residues MESNFIDWHPADIIAGLRKKETSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDR TQLMRSYTKPKK >Mature_92_residues MESNFIDWHPADIIAGLRKKETSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDR TQLMRSYTKPKK
Specific function: This protein is involved in positive regulation of the metabolism of sugars [H]
COG id: COG3423
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ner transcriptional regulatory family [H]
Homologues:
Organism=Escherichia coli, GI1789579, Length=92, Percent_Identity=98.9130434782609, Blast_Score=189, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010982 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10567; Mature: 10567
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNFIDWHPADIIAGLRKKETSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCC PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK CEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MESNFIDWHPADIIAGLRKKETSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCC PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK CEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]