| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yqiG [H]
Identifier: 91212472
GI number: 91212472
Start: 3414177
End: 3416699
Strand: Direct
Name: yqiG [H]
Synonym: UTI89_C3480
Alternate gene names: 91212472
Gene position: 3414177-3416699 (Clockwise)
Preceding gene: 91212471
Following gene: 91212473
Centisome position: 67.4
GC content: 46.89
Gene sequence:
>2523_bases ATGAACAATAAAAACACGTTTTCCCGGGATAAGTTATCCCATGCAATTAAAAATGCCCTGTCTGGCGTTGTGTGTTCCCT ACTCTTCGTTTTGCCAGTCCACGCCGTAGAATTCAACGTCGATATGATTGACGCAGAAGACCGTGAGAATATCGACATCT CTCGTTTTGAGAAAAAAGGCTATATCCCCCCTGGTAGATACCTCGTTCGTGTGCAAATAAATAAAAATATGTTGCCACAA ACGTTAATACTGGAATGGGTAAAAGCCGATAATGAAAGTGGTTCGTTACTCTGCTTAACCAAAGAAAATTTGACTAATTT CGGTCTTAATACGGAATTTATTGAATCATTGCAAAACATAGCTGGCAGCGAATGTCTCGATTTAAGCCAACGTCAGGAGT TAACGACACGACTTGATAAAGCTACGATGATATTATCGCTAAGTGTTCCCCAGGCATGGTTAAAATACCAGGCAACAAAC TGGACGCCACCAGAGTTTTGGGATACCGGTATCGCCGGGTTTATCCTTGATTACAACGTGTACGCCAGCCAGTATGCCCC ACATCACGGAGACAGCACCCAAAACGTCAGCTCCTATGGTACGTTAGGCTTTAACCTCGGCGCATGGCGCTTACGTAGCG ATTACCAATATAATCAGAATTTTGCTGATGGACGCTCGGTAAACCGCGACAGCGAATTTGCGCGAACTTATCTGTTTCGC CCTATCCCCTCCTGGTCGTCAAAATTCACTATGGGCCAGTACGACCTGAGCTCCAATCTTTACGATACCTTCCACTTTAC TGGCGCATCGCTGGAAAGTGATGAAAGCATGCTGCCGCCAGATTTACAGGGTTATGCGCCACAAATTACCGGCATCGCGC AGACCAACGCGAAAGTAACTGTGGCACAAAATGGTCGTGTACTTTATCAAACCACTGTCGCGCCAGGCCCTTTTACTATT TCTGATTTGGGGCAATCGTTTCAGGGGCTGCTGGATGTCACAGTGGAAGAAGAAGATGGCCGCACCAGCACCTTCCAGGT TGGCTCCGCATCCATTCCCTATTTAACCCGTAAAGGGCAAGTGCGCTATAAAACGTCACTGGGAAAACCGACATCCGTCG GGCATAACGATATCAATAATCCCTTTTTCTGGACGGCGGAAGCCTCCTGGGGCTGGCTGAACAATGTGTCGTTGTATGGT GGTGGCATGTTCACCGCTGATGATTATCAGGCTATCACTACCGGTATTGGCTTTAACCTTAACCAATTCGGTTCGCTTTC TTTTGATGTCACTGGAGCAGACGCGTCTTTACAGCAACAAAATAGCGGCAATCTGCGTGGTTACAGCTATCGCTTCAACT ATGCAAAGCATTTCGAATCGACAGGCAGTCAGATTACCTTCGCGGGTTATCGCTTCTCAGATAAAGATTACGTGTCGATG AGTGAGTACCTCAGCTCGCGTAATGGCGATGAGTCAATCGATAATGAAAAAGAGAGTTATGTCATTTCCTTGAACCAGTA CTTTGAAACGCTGGAATTAAACTCTTATCTCAACGTTACACGCAATACTTATTGGGACAGCGCCAGCAATACCAACTACT CCGTATCTGTAAGCAAAAACTTTGATATTGGCGATTTCAAAGGTATATCTGCATCGCTGGCAGTAAGTCGAATCCGCTGG GATGACGACGAAGAGAATCAATATTACTTCTCTTTCTCTCTACCTTTACAACAAAACCGCAACATCTCCTACAGTATGCA GCGAACGGGAAGCAGTAATACTTCGCAGATGATTTCCTGGTACGATTCATCAGATCGCAACAATATCTGGAATATTTCAG CGTCGGCAACGGACGACAATATACGTGATGGCGAACCAACACTGCGCGGCAGCTACCAGCACTATTCGCCGTGGGGACGT CTGAACATTAATGGCAGTGTACAGCCGAATCAGTACAATTCTGTTACCGCAGGCTGGTACGGTTCACTTACCGCTACACG TCATGGTATCGCCCTTCACGATTATAGCTATGGCGATAACGCCCGCATGATGGTCGATACCGATGGCATCTCCGGCATTG AAATCAACTCTAACCGTACCGTTACCAACGGGCTGGGCATCGCCGTGATACCTTCGTTATCGAACTACACCACCTCCATG TTGCGGGTGAACAATAACGATCTGCCAGAAGGTGTCGATGTCGAAAACTCGGTTATTCGCACCACGCTCACCCAGGGTGC CATCGGCTACGCAAAACTGAATGCCACCACCGGTTACCAAATCGTCGGCGTTATTCGTCAGGAAAATGGGCGCTTCCCTC CACTAGGTGTGAATGTCACGGATAAAGCGACAGGTAAAGATGTGGGCCTGGTCGCGGAAGACGGCTTCGTTTATCTCAGC GGTATTCAGGAAAATAGTACTCTGCATTTAACCTGGGGTGATAATACCTGTGAAGTCACGCCGCCAAACCAAAGTAACAT TAGCGAAAGCGCAATAATTTTACCTTGTAAAACAGTCAAATAA
Upstream 100 bases:
>100_bases TCGACTACAAGTAATCGGTAGTCAATACCTACACAACGCCAGGCGGTAAAGCCGATGAAATTTCATCGGCAACTTTGGGC CTTTTTAGAAATGGATTTTT
Downstream 100 bases:
>100_bases TTCAGGATGAATATAATGAAATCACCATTAATCACAACAGGAATGATTTGTTTACTGGGGATCTGCAACTTTGCCCAGGC GACTGTCTCTCCCGACAGAA
Product: putative outer membrane usher protein YqiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 840; Mature: 840
Protein sequence:
>840_residues MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKGYIPPGRYLVRVQINKNMLPQ TLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATN WTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPGPFTI SDLGQSFQGLLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYG GGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVSRIRW DDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGR LNINGSVQPNQYNSVTAGWYGSLTATRHGIALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGFVYLS GIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK
Sequences:
>Translated_840_residues MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKGYIPPGRYLVRVQINKNMLPQ TLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATN WTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPGPFTI SDLGQSFQGLLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYG GGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVSRIRW DDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGR LNINGSVQPNQYNSVTAGWYGSLTATRHGIALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGFVYLS GIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK >Mature_840_residues MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKGYIPPGRYLVRVQINKNMLPQ TLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATN WTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPGPFTI SDLGQSFQGLLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYG GGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVSRIRW DDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGR LNINGSVQPNQYNSVTAGWYGSLTATRHGIALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGFVYLS GIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK
Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fimbrial export usher family [H]
Homologues:
Organism=Escherichia coli, GI87081778, Length=818, Percent_Identity=42.6650366748166, Blast_Score=654, Evalue=0.0, Organism=Escherichia coli, GI1790772, Length=860, Percent_Identity=28.3720930232558, Blast_Score=295, Evalue=1e-80, Organism=Escherichia coli, GI1787172, Length=816, Percent_Identity=28.921568627451, Blast_Score=279, Evalue=7e-76, Organism=Escherichia coli, GI1786332, Length=876, Percent_Identity=28.6529680365297, Blast_Score=277, Evalue=2e-75, Organism=Escherichia coli, GI1789533, Length=832, Percent_Identity=29.8076923076923, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1786744, Length=846, Percent_Identity=27.4231678486998, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1788427, Length=605, Percent_Identity=29.0909090909091, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1789610, Length=845, Percent_Identity=24.1420118343195, Blast_Score=106, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000015 - InterPro: IPR018030 [H]
Pfam domain/function: PF00577 Usher [H]
EC number: NA
Molecular weight: Translated: 93497; Mature: 93497
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS01151 FIMBRIAL_USHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHHCC YIPPGRYLVRVQINKNMLPQTLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNI CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH AGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATNWTPPEFWDTGIAGFILDYNV CCCHHHCHHHHHHHHHHHCCEEEEEEECCCHHHHEEECCCCCCCHHHCCCCEEEEEEEEE YASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR HHHHCCCCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEC PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVT CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE VAQNGRVLYQTTVAPGPFTISDLGQSFQGLLDVTVEEEDGRTSTFQVGSASIPYLTRKGQ EEECCEEEEEEECCCCCEEHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCC VRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYGGGMFTADDYQAITTGIGFNL EEEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCEEEECCEEEECCCCEEEEECCCCCC NQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM CCCCCEEEEEECCCCCHHHCCCCCCEEEEEEECHHHHHHCCCCEEEEEEEEECCCCHHHH SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKN HHHHHCCCCCCCCCCCCCEEEEEHHHHHHHEECCCEEEEECCEEECCCCCCCEEEEEECC FDIGDFKGISASLAVSRIRWDDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISW CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE YDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGRLNINGSVQPNQYNSVTAGWY ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCC GSLTATRHGIALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM CCEEECCCCEEEEECCCCCCCEEEEECCCCCEEEECCCCEEECCCCEEEECCCCCCEEEE LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVT EEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCC DKATGKDVGLVAEDGFVYLSGIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK CCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHHCC YIPPGRYLVRVQINKNMLPQTLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNI CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH AGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATNWTPPEFWDTGIAGFILDYNV CCCHHHCHHHHHHHHHHHCCEEEEEEECCCHHHHEEECCCCCCCHHHCCCCEEEEEEEEE YASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR HHHHCCCCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEC PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVT CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE VAQNGRVLYQTTVAPGPFTISDLGQSFQGLLDVTVEEEDGRTSTFQVGSASIPYLTRKGQ EEECCEEEEEEECCCCCEEHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCC VRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYGGGMFTADDYQAITTGIGFNL EEEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCEEEECCEEEECCCCEEEEECCCCCC NQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM CCCCCEEEEEECCCCCHHHCCCCCCEEEEEEECHHHHHHCCCCEEEEEEEEECCCCHHHH SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKN HHHHHCCCCCCCCCCCCCEEEEEHHHHHHHEECCCEEEEECCEEECCCCCCCEEEEEECC FDIGDFKGISASLAVSRIRWDDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISW CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE YDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGRLNINGSVQPNQYNSVTAGWY ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCC GSLTATRHGIALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM CCEEECCCCEEEEECCCCCCCEEEEECCCCCEEEECCCCEEECCCCEEEECCCCCCEEEE LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVT EEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCC DKATGKDVGLVAEDGFVYLSGIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK CCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]