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The map label for this gene is ygiK [H]

Identifier: 91212434

GI number: 91212434

Start: 3378117

End: 3379463

Strand: Direct

Name: ygiK [H]

Synonym: UTI89_C3442

Alternate gene names: 91212434

Gene position: 3378117-3379463 (Clockwise)

Preceding gene: 91212433

Following gene: 91212442

Centisome position: 66.69

GC content: 45.29

Gene sequence:

>1347_bases
TTGACAACTATCGTAAACGGAATTCTCATTAACGAGGGAAATATGGAATTTGAATATATCTACCCCGTCTTAATTTTATT
TGGCAGTTTTGCCGTCATGCTGGCAATAGGTGTGCCAATTACTTTTGCGATTGGTCTTTCTTCGCTGTTATCTATTATTA
CTGCCTTGCCACCCGATGCCGCCATTTCTGTTATTTCACAAAAAATGACTGTAGGGCTGGATGGCTTTACGCTATTAGCC
ATTCCCTTCTTCGTGTTAGCCGGAAACATTATGAATACCGGTGGTATAGCCAGACGACTGGTTAACCTGGCGCAAGCATT
AGTTGGGCGTCTTCCTGGCTCACTGGCTCATTGTAATATCCTCGCGAATACACTGTTTGGTGCGATTTCAGGTTCAGCCG
TTGCGTCAGCCGCAGCGGTAGGTGGGATTATGTCACCACTGCAAGAAAAAGAGGGATATGATCCGGCGTTTTCAGCAGCG
GTTAATATTGCCTCTGCCCCCATTGGCCTGATGATCCCACCGAGCAATGTGTTGATTGTTTATTCCCTCGCCAGTGGCGG
GACTTCTGTCGCTGCGTTGTTCTTAGCTGGATATCTGCCGGGCATCCTCACCGCTGTTGCCTTAATGTTTGTAGCTGCAC
TTTATGCACGACGTCACCATTACCCAGTGGCCGAACGCATCAATTACCGTCAGTTTTTACAGGTATTCCGCGAATCAATT
CCTAGCCTGATGCTTATTTTTATCATTATTGGCGGTATTATCGCAGGGGTATTTACGCCCACAGAAGCATCAGCAATAGC
GGTAATTTATAGTTTAGCCCTGGCGATGATTTACCGGGAAATCACTCTTAAGAAGCTCAATGATATTCTGTTAGATTCGG
TAGTAACCAGTTCAATTGTTCTGTTACTGGTAGGCTGTTCAATGGGAATGTCATGGGCCATGACGAATGCTGATGTTCCT
GAGTTGATCAACGAACTGATTACCCGCGTTTCGGATAACAAATGGGTCATTCTGTTTATTATCAATATCATTCTGTTGAT
CGTCGGTACCTTTATGGATATCACGCCGGCGATCCTGATATTTACACCTATTTTCCTGCCGATCGCCCAGCATCTGGGGA
TTGATCCGATTCACTTCGGCATAATTATGGTTTTCAACTTAACCATTGGCCTTTGCACACCACCTGTCGGCACCATTCTG
TTTGTGGGGTGCAGCATTGGTAAGGTCAGTATCGACAGGGCAATAAAACCATTACTGCCGATGTTTCTGGCATTGTTTGT
AGTAATGGCAATTATTTGTTATTTCCCGCAGCTTAGTCTGATGCTGCCAGGATTATTTTCGACCTGA

Upstream 100 bases:

>100_bases
GGACAAATCTCTCCAGTATTAAAATGGCCAATGGATAAAGTATATTGGGTTATGCCTGTCAGTGGGCTTATTCTGGTCTG
GTATTCAGTAATGAATATTA

Downstream 100 bases:

>100_bases
TACACAATGAAGACTGCATACTGAGTAATTTTCAATGCCCCACCACTCTGTGGGGCATTGAATTGGTCCATTACGGTACC
GGATTGACCAACAGTTGCCC

Product: c4-dicarboxylate permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MTTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLDGFTLLA
IPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAVASAAAVGGIMSPLQEKEGYDPAFSAA
VNIASAPIGLMIPPSNVLIVYSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESI
PSLMLIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAMTNADVP
ELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTIL
FVGCSIGKVSIDRAIKPLLPMFLALFVVMAIICYFPQLSLMLPGLFST

Sequences:

>Translated_448_residues
MTTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLDGFTLLA
IPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAVASAAAVGGIMSPLQEKEGYDPAFSAA
VNIASAPIGLMIPPSNVLIVYSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESI
PSLMLIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAMTNADVP
ELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTIL
FVGCSIGKVSIDRAIKPLLPMFLALFVVMAIICYFPQLSLMLPGLFST
>Mature_447_residues
TTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDAAISVISQKMTVGLDGFTLLAI
PFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNILANTLFGAISGSAVASAAAVGGIMSPLQEKEGYDPAFSAAV
NIASAPIGLMIPPSNVLIVYSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESIP
SLMLIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIVLLLVGCSMGMSWAMTNADVPE
LINELITRVSDNKWVILFIINIILLIVGTFMDITPAILIFTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILF
VGCSIGKVSIDRAIKPLLPMFLALFVVMAIICYFPQLSLMLPGLFST

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=419, Percent_Identity=36.9928400954654, Blast_Score=242, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 47648; Mature: 47517

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDA
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
AISVISQKMTVGLDGFTLLAIPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNI
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LANTLFGAISGSAVASAAAVGGIMSPLQEKEGYDPAFSAAVNIASAPIGLMIPPSNVLIV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCEEEE
YSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESI
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
PSLMLIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLVGCSMGMSWAMTNADVPELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILI
HHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
FTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGCSIGKVSIDRAIKPLLP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
MFLALFVVMAIICYFPQLSLMLPGLFST
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTIVNGILINEGNMEFEYIYPVLILFGSFAVMLAIGVPITFAIGLSSLLSIITALPPDA
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
AISVISQKMTVGLDGFTLLAIPFFVLAGNIMNTGGIARRLVNLAQALVGRLPGSLAHCNI
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
LANTLFGAISGSAVASAAAVGGIMSPLQEKEGYDPAFSAAVNIASAPIGLMIPPSNVLIV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCEEEE
YSLASGGTSVAALFLAGYLPGILTAVALMFVAALYARRHHYPVAERINYRQFLQVFRESI
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
PSLMLIFIIIGGIIAGVFTPTEASAIAVIYSLALAMIYREITLKKLNDILLDSVVTSSIV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLVGCSMGMSWAMTNADVPELINELITRVSDNKWVILFIINIILLIVGTFMDITPAILI
HHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
FTPIFLPIAQHLGIDPIHFGIIMVFNLTIGLCTPPVGTILFVGCSIGKVSIDRAIKPLLP
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
MFLALFVVMAIICYFPQLSLMLPGLFST
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]